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MEDAPPA, Monica, Petra POSPÍŠILOVÁ, Lucy N JOHN, Camila GONZÁLEZ-BEIRAS, Oriol MITJÀ and David ŠMAJS. Coinfection of a yaws patient with two closely related Treponema pallidum subsp. pertenue strains: A rare event with potential evolutionary implications. Acta Tropica. AMSTERDAM: ELSEVIER, 2024, vol. 256, August 2024, p. 1-6. ISSN 0001-706X. Available from: https://dx.doi.org/10.1016/j.actatropica.2024.107254.
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KOSEČKOVÁ MICENKOVÁ, Lenka, Kristýna BRODÍKOVÁ, Soňa SMETANOVÁ, Juraj BOSÁK, David ŠMAJS, Petr ANDRLA and Eva BUDINSKÁ. High colonisation by probiotic Escherichia coli A0 34/86 strain is associated with a less diverse microbiome related to children’s age. Beneficial Microbes. Wageningen Academic, 2024, vol. 15, No 1, p. 5-17. ISSN 1876-2883. Available from: https://dx.doi.org/10.1163/18762891-20220049.
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KNAUF, Sascha, Linda HISGEN, Erik O. ÅGREN, Alexander M BARLOW, Marcus FAEHNDRICH, Ulrich VOIGT, Luisa FISCHER, Linda GRILLOVÁ, Luisa K HALLMAIER-WACKER, Marja J L KIK, Jana C KLINK, Jitka KŘENOVÁ, Antonio LAVAZZA, Simone LÜERT, Markéta NOVÁKOVÁ, Darina ČEJKOVÁ, Carlo PACIONI, Tiziana TROGU, David ŠMAJS and Christian ROOS. High prevalence and genetic diversity of Treponema paraluisleporidarum isolates in European lagomorphs. Microbiology spectrum. WASHINGTON: AMER SOC MICROBIOLOGY, 2024, vol. 12, No 1, p. 1-15. ISSN 2165-0497. Available from: https://dx.doi.org/10.1128/spectrum.01774-23.
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MEDAPPA, Monica, Petra POSPÍŠILOVÁ, Maria Paula M MADRUGA, Lucy N JOHN, Camila G BEIRAS, Linda GRILLOVÁ, Jan OPPELT, Arka BANERJEE, Marti VALL-MAYANS, Oriol MITJA and David ŠMAJS. Low genetic diversity of Treponema pallidum ssp. pertenue (TPE) isolated from patients’ ulcers in Namatanai District of Papua New Guinea: Local human population is infected by three TPE genotypes. PLoS neglected tropical diseases. San Francisco: Public Library of Science, 2024, vol. 18, No 1, p. 1-17. ISSN 1935-2735. Available from: https://dx.doi.org/10.1371/journal.pntd.0011831.
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VRBOVÁ, Eliška, Petra POSPÍŠILOVÁ, Eliška DASTYCHOVÁ, Martina KOJANOVA, Miluse KREIDLOVA, Filip ROB, Vladimír VAŠKŮ, Petra MOSIO, Radim STRNADEL, Olga FAUSTMANNOVA, Ivana KUKLOVA, Monika DVOŘÁKOVÁ HEROLDOVÁ, Hana ZAKOUCKA and David ŠMAJS. Majority of Treponema pallidum ssp. pallidum MLST allelic profiles in the Czech Republic (2004–2022) belong to two SS14-like clusters. Scientific Reports. BERLIN: NATURE RESEARCH, 2024, vol. 14, No 1, p. 1-9. ISSN 2045-2322. Available from: https://dx.doi.org/10.1038/s41598-024-68656-5.
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BOZDĚCHOVÁ, Lucie, Anna RUDOLFOVÁ, Kateřina HANÁKOVÁ, Miloslava FOJTOVÁ and Jiří FAJKUS. Optimizing ChIRP-MS for Comprehensive Profiling of RNA-Protein Interactions in Arabidopsis thaliana: A Telomerase RNA Case Study. Plants. MDPI, 2024, vol. 13, No 6, p. 1-12. ISSN 2223-7747. Available from: https://dx.doi.org/10.3390/plants13060850.
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LIPOVÝ, Břetislav, Martin HLADÍK, Kateřina VYKLICKÁ, Iva KOCMANOVÁ, Martina LENGEROVÁ, Leoš KŘEN, Michal SRNÍK, Jan BÖHM, Petr ANDRLA and Petra BOŘILOVÁ LINHARTOVÁ. Rare multi-fungal sepsis: a case of triple-impact immunoparalysis. Folia microbiologica. Praha: Mikrobiologický ústav Praha AV ČR, 2024, vol. 69, No 4, p. 903-911. ISSN 0015-5632. Available from: https://dx.doi.org/10.1007/s12223-024-01165-0.
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MEDAPPA, Monica, Petra POSPÍŠILOVÁ, Lucy N JOHN, Camila GONZÁLEZ-BEIRAS, Marti VALL-MAYANS, Oriol MITJÀ and David ŠMAJS. Sequence typing of Haemophilus ducreyi isolated from patients in the Namatanai region of Papua New Guinea: Infections by Class I and Class II strain types differ in ulcer duration and resurgence of infection after azithromycin treatment. PLoS ONE. SAN FRANCISCO: PUBLIC LIBRARY SCIENCE, 2024. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0307196.
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VRBOVÁ, Eliška, Helene ZONDAG, Sylvia BRUISTEN and David ŠMAJS. The Arg753Gln Polymorphisms in Toll-like Receptor 2 in a Syphilis-Infected and Control Population in The Netherlands: Can Differences in the Number of Self-Reported Sexual Contacts Indicate Protection against Syphilis? Venerology. Basel: MDPI, 2024, vol. 3, No 1, p. 1-9. ISSN 2674-0710. Available from: https://dx.doi.org/10.3390/venereology3010003.
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POSPÍŠILOVÁ, Petra, Darina ČEJKOVÁ, Pavla BURŠÍKOVÁ, Pavla FEDROVÁ, Lenka MIKALOVÁ, David NAJT, Nikola TOM, Linda HISGEN, Simone LUEERT, Johannes T LUMEIJ, Erik O ÅGREN, Sascha KNAUF and David ŠMAJS. The hare syphilis agent is related to, but distinct from, the treponeme causing rabbit syphilis. PLoS One. SAN FRANCISCO: PUBLIC LIBRARY SCIENCE, 2024. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0307196.
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BOSÁK, Juraj, Lenka MIKALOVÁ, Matěj HRALA, Petra POSPÍŠILOVÁ, Martin FALDYNA and David ŠMAJS. Treponema pallidum subsp. pallidum strains DAL-1 and Philadelphia 1 differ in generation times in vitro as well as during experimental rabbit infection. Plos One. SAN FRANCISCO: PUBLIC LIBRARY SCIENCE, 2024. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0304033.
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SEREME, Youssouf, Sandra Madariaga ZARZA, Hacène MEDKOUR, Soraya MEZOUAR, Laia DOTRAS, Amanda BARCIELA, R Adriana HERNANDEZ-AGUILAR, Joana VITTE, David ŠMAJS, Meriem LOUNI, Baptiste MULOT, Antoine LECLERC, Guéry JEAN-PASCAL, Nicolas ORAIN, Georges DIATTA, Cheikh SOKHNA, Didier RAOULT, Bernard DAVOUST, Florence FENOLLAR and Oleg MEDIANNIKOV. Treponematosis in critically endangered Western chimpanzees (Pan troglodytes verus) in Senegal. One Health. AMSTERDAM: ELSEVIER, 2024, vol. 18, June 2024, p. 1-9. ISSN 2352-7714. Available from: https://dx.doi.org/10.1016/j.onehlt.2024.100694.
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MEDAPPA, Monica, Petra POSPÍŠILOVÁ, Oriol MITJA, Camila GONZALEZ-BEIRAS and David ŠMAJS. Co-infection with two closely related Treponema pallidum subsp. pertenue strains in a yaws patient from Namatanai, Papua New Guinea. 2023.
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MLČŮCHOVÁ, Natálie, Terezie SLÁMOVÁ, Petra BRENEROVÁ, Tereza DEISSOVÁ, Jan BÖHM, Lumír KUNOVSKÝ, Radek KROUPA, Jiří DOLINA, Vladimír PROCHÁZKA, Tomáš GROLICH, Jitka VACULOVÁ, Petr ANDRLA, Vít NAVRÁTIL, Ondřej URBAN, Tomáš HARUŠTIAK, Robert LISCHKE, Lydie IZAKOVIČOVÁ HOLLÁ, Ondřej SLABÝ, Zdeněk KALA, Eva BUDINSKÁ and Petra BOŘILOVÁ LINHARTOVÁ. Comparison of sequencing analyses targeting the V1/V2 and V3/V4 regions in the 16S rDNA gene – analysis of bacteriome in oral swabs and esophageal tissues. In Biologické dny, 2023. 2023.
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FEDROVÁ, Pavla, Matěj HRALA, Nikola TOM, Lenka KOSEČKOVÁ MICENKOVÁ, Andrea M. A. NASCIMENTO, Juraj BOSÁK and David ŠMAJS. Complete genome sequences of five Escherichia coli strains with probiotic attributes. Microbiology Resource Announcements. Washington, D.C.: American Society for Microbiology, 2023, vol. 12, No 9, p. 1-3. ISSN 2576-098X. Available from: https://dx.doi.org/10.1128/MRA.00363-23.
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BOSÁK, Juraj, Darina KOHOUTOVÁ, Matěj HRALA, Paula MORÁVKOVÁ, Stanislav RAJCHRT, Jan BUREŠ and David ŠMAJS. Escheria Coli differs in virulence-associated genes between patients with colorectal neoplazma and healthy controls. 2023.
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BOSÁK, Juraj, Darina KOHOUTOVÁ, Matěj HRALA, Jitka KŘENOVÁ, Paula MORÁVKOVÁ, Stanislav REJCHRT, Jan BUREŠ and David ŠMAJS. Escherichia coli from biopsies differ in virulence genes between patients with colorectal neoplasia and healthy controls. Frontiers in Microbiology. LAUSANNE: FRONTIERS MEDIA SA, 2023, vol. 14, April 2023, p. 1-10. ISSN 1664-302X. Available from: https://dx.doi.org/10.3389/fmicb.2023.1141619.
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HRALA, Matěj, Juraj BOSÁK, Marina JOSEPH, Martina FLORIANOVÁ, Helena JUŘICOVÁ, Ulrich WERNERY and David ŠMAJS. Extraintestinal pathogenic Escherichia coli in camels: Characteristics and sources of infection. 2023.
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VRBOVÁ, Eliška. "Fearless Faith" : Increasing Risk-taking through Magical Thinking. In ISHE Summer Institute 2023, International Society for Human Ethology, July 22 – 25, 2023, České Budějovice, Czech Republic. 2023.
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VRBOVÁ, Eliška. "Fearless faith": Increasing Risk-taking through Magical Thinking. In Human Ethology 38(2023)(Suppl.): HES1. 2023. Available from: https://dx.doi.org/.
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BOSÁK, Juraj, Matěj HRALA, Eliška VRBOVÁ, Monica MEDAPPA, Petra POSPÍŠILOVÁ and David ŠMAJS. In vitro cultivation of Treponema Pallidum: New tool to study physiology and genetics of the syphilis agent. In NIVB Meeting 2023. 2023.
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SLABÝ, Ondřej, Iva SLANINOVÁ, David ŠMAJS, Jiří ŠÁNA, Vladimír ROTREKL, Pavel KREJČÍ, Stjepan ULDRIJAN, Juraj BOSÁK, Kateřina SLABÁ and Sabina ŠEVČÍKOVÁ. Lékařská biologie II. Genetika a molekulární medicína (Medical Biology II. Genetics and molecular medicine). 1st ed. Brno: Masarykova univerzita, 2023, 227 pp. ISBN 978-80-280-0338-8.
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MEDAPPA, Monica, Petra POSPÍŠILOVÁ, Maria M FERNANDES, Lucy N JOHN, Camila G BEIRAS, Linda GRILLOVÁ, Jan OPPELT, Arka BANERJEE, Marti VALL-MAYANS, Oriol MITJÀ and David ŠMAJS. Low genetic diversity of Treponema pallidum ssp. pertenue (TPE) isolated from patients’ ulcers in Namatanai District of Papua New Guinea. 2023.
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VRBOVÁ, Eliška. "Neohrožená víra" : zvýšení ochoty riskovat skrze magické myšlení ("Fearless faith" : Increasing Risk-taking through Magical Thinking). In Mezinárodní religionistická studentská vědecká konference. 2023.
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POSPÍŠILOVÁ, Petra, Pavla FEDROVÁ, Nikola TOM and David ŠMAJS. RNAseq of Treponema Pallidum during experimental rabbit infection. 2023.
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LÁTROVÁ, Klara, Tereza DOLEJŠOVÁ, Lucia MOTLOVÁ, Gabriela MIKUŠOVÁ, Juraj BOSÁK, Kateřina SNOPKOVÁ, David ŠMAJS, Ivo KONOPÁSEK and Radovan FIŠER. R-Type Fonticins Produced by Pragia fontium Form Large Pores with High Conductance. JOURNAL OF BACTERIOLOGY. WASHINGTON: AMER SOC MICROBIOLOGY, 2023, vol. 205, No 1, p. 1-15. ISSN 0021-9193. Available from: https://dx.doi.org/10.1128/jb.00315-22.
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JANEČKOVÁ, Klára, Christian ROOS, Pavla FEDROVÁ, Nikola TOM, Darina CEJKOVA, Simone LUEERT, Julius D KEYYU, Idrissa S CHUMA, Sascha KNAUF and David ŠMAJS. The genomes of the yaws bacterium, Treponema pallidum subsp. pertenue, of nonhuman primate and human origin are not genomically distinct. PLoS neglected tropical diseases. San Francisco: Public Library of Science, 2023, vol. 17, No 9, p. 1-21. ISSN 1935-2735. Available from: https://dx.doi.org/10.1371/journal.pntd.0011602.
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POSPÍŠILOVÁ, Petra, Darina ČEJKOVÁ, Pavla HAVLÍČKOVÁ, Pavla FEDROVÁ, Lenka MIKALOVÁ, David NAJT, Nikola TOM, Linda HIGSEN, Simona LUEERT, Johannes T. LUMEIJ, Erik O. ARGEN, Sascha KNAUF and David ŠMAJS. Whole Genome Sequence of Treponema Paraluisleporidarum Ecovar Lepus, Strain V3603-13. 2023.
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VYKLICKÁ, Kateřina, Jan BÖHM, Petr ANDRLA, Eva BUDINSKÁ, Břetislav LIPOVÝ and Petra BOŘILOVÁ LINHARTOVÁ. 16S rDNA sequencing analysis of low-abundance samples spiked with bacterial mock community. In III. ČESKO-SLOVENSKÝ KONGRES MEZIOBOROVÉ PŘÍSTUPY V HOJENÍ RAN. 2023.
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HICKS, Tara, Shalini TRIVEDI, Mikayla EPPERT, Richard BOWMAN, Hui TIAN, Amna DAFALLA, Caroline CRAHAN, Sarit SMOLIKOVE and Nicola SILVA. Continuous double-strand break induction and their differential processing sustain chiasma formation during Caenorhabditis elegans meiosis. Cell Reports. CAMBRIDGE: Cell Press, 2022, vol. 40, No 13, p. 1-20. ISSN 2211-1247. Available from: https://dx.doi.org/10.1016/j.celrep.2022.111403.
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PLA-DIAZ, Marta, Leonor SANCHEZ-BUSO, Lorenzo GIACANI, David ŠMAJS, Philipp P BOSSHARD, Homayoun C BAGHERI, Verena J SCHUENEMANN, Kay NIESELT, Natasha ARORA and Fernando GONZALEZ-CANDELAS. Evolutionary Processes in the Emergence and Recent Spread of the Syphilis Agent, Treponema pallidum. Molecular Biology and Evolution. Oxford: Oxford University Press, 2022, vol. 39, No 1, p. 1-14. ISSN 0737-4038. Available from: https://dx.doi.org/10.1093/molbev/msab318.
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MORANDO, Nicolas, Eliška VRBOVÁ, Asunta MELGAR, Roberto Daniel RABINOVICH, David ŠMAJS and Maria A PANDO. High frequency of Nichols-like strains and increased levels of macrolide resistance in Treponema pallidum in clinical samples from Buenos Aires, Argentina. Nature Scientific Reports. Berlin: NATURE RESEARCH, 2022, vol. 12, No 1, p. 1-10. ISSN 2045-2322. Available from: https://dx.doi.org/10.1038/s41598-022-20410-5.
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BOSÁK, Juraj, Darina KOHOUTOVÁ, Matěj HRALA, Paula MORÁVKOVÁ, Stanislav REJCHRT, Jan BUREŠ and David ŠMAJS. CHARACTERIZATION OF ESCHERICHIA COLI ISOLATES FROM PATIENTS WITH COLON CANCER. In NIVB Meeting 2022. 2022.
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POSPÍŠILOVÁ, Petra, Pavla FEDROVÁ, Eliška VRBOVÁ, Nikola TOM and David ŠMAJS. MINION AS A TOOL FOR SEQUENCING OF VARIABLE AND PARALOGOUS GENOMIC LOCI OF TREPONEMA PALLIDUM. In NIVB Meeting 2022. 2022.
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TRIVEDI, Shalini, Jitka BLAŽÍČKOVÁ and Nicola SILVA. PARG and BRCA1-BARD1 cooperative function regulates DNA repair pathway choice during gametogenesis. Nucleic acids research. Oxford: Oxford University Press, 2022, vol. 50, No 21, p. 12291-12308. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkac1153.
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SNOPKOVÁ, Kateřina, Kristýna DUFKOVÁ, Ivo CHAMRÁD, René LENOBEL, Darina ČEJKOVÁ, Marcel KOSINA, Matěj HRALA, Veronika HOLÁ, Ivo SEDLÁČEK and David ŠMAJS. Pyocin-mediated antagonistic interactions in Pseudomonas spp. isolated in James Ross Island, Antarctica. ENVIRONMENTAL MICROBIOLOGY. HOBOKEN: WILEY, 2022, vol. 24, No 3, p. 1294-1307. ISSN 1462-2912. Available from: https://dx.doi.org/10.1111/1462-2920.15809.
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POSPÍŠILOVÁ, Petra, Juraj BOSÁK, Eliška VRBOVÁ, Matěj HRALA and David ŠMAJS. Syphilis causing strains: differences in growth rates and patients infection characteristics. In NIVB Meeting 2022 30th November - 2 nd December, 2022 Kutná Hora, Czech Republic. 2022. ISSN 2336-7202.
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ŠMAJS, David. Syphilis causing strains: differences in growth rates and patients infection characteristics. In NIVB Meeting 2022 30th November - 2nd December, 2022 Kutná Hora, Czech Republic. 2022.
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JOHN, Lucy N, Camila G BEIRAS, Wendy HOUINEI, Monica MEDAPPA, Maria SABOK, Reman KOLMAU, Eunice JONATHAN, Edward MAIKA, James K WANGI, Petra POSPÍŠILOVÁ, David ŠMAJS, Dan OUCHI, Ivan GALVAN-FEMENIA, Mathew A BEALE, Lorenzo GIACANI, Bonaventura CLOTET, Eric Q MOORING, Michael MARKS, Marti VALL-MAYANS and Oriol MITJA. Trial of Three Rounds of Mass Azithromycin Administration for Yaws Eradication. New England Journal of Medicine. Waltham: Massachussetts Medical Society, 2022, vol. 386, No 1, p. 47-56. ISSN 0028-4793. Available from: https://dx.doi.org/10.1056/NEJMoa2109449.
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VRBOVÁ, Eliška, Angel A NODA, Linda GRILLOVÁ, Islay RODRIGUEZ, Allyn FORSYTH, Jan OPPELT and David ŠMAJS. Whole genome sequences of Treponema pallidum subsp. endemicum isolated from Cuban patients: The non-clonal character of isolates suggests a persistent human infection rather than a single outbreak. PLoS neglected tropical diseases. San Francisco: Public Library of Science, 2022, vol. 16, No 6, p. 1-12. ISSN 1935-2735. Available from: https://dx.doi.org/10.1371/journal.pntd.0009900.
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JONES, W., B.S. GONG, N. NOVORADOVSKAYA, D. LI, R. KUSKO, T.A. RICHMOND, D.J. JOHANN, H. BISGIN, S.M.E. SAHRAEIAN, P.R. BUSHEL, M. PIROOZNIA, K. WILKINS, M. CHIERICI, W.J. BAO, L.S. BASEHORE, A.B. LUCAS, D. BURGESS, D.J. BUTLER, S. CAWLEY, C.J. CHANG, G.C. CHEN, T. CHEN, Y.C. CHEN, D.J. CRAIG, A. DEL POZO, J. FOOX, M. FRANCESCATTO, YT FU, C. FURLANELLO, K. GIORDA, K.P. GRIST, M.J. GUAN, Y.Y. HAO, S. HAPPE, G. HARIANI, N. HASELEY, J. JASPER, G. JURMAN, D.P. KREIL, P. LABAJ, K. LAI, J.Y. LI, Q.Z. LI, Y.L. LI, Z.G. LI, Z.C. LIU, M.S. LOPEZ, K. MICLAUS, R. MILLER, V.K. MITTAL, M. MOHIYUDDIN, C. PABON-PENA, B.L. PARSONS, F.J. QIU, A. SCHERER, T.L. SHI, S. STIEGELMEYER, C. SUO, Nikola TOM, D. WANG, Z.N. WEN, L.H. WU, W.Z. XIAO, C. XU, Y. YU, J.Y. ZHANG, Y.F. ZHANG, Z.H. ZHANG, Y.T. ZHENG, C.E. MASON, J.C. WILLEY, W.D. TONG, L.M. SHI and J. XU. A verified genomic reference sample for assessing performance of cancer panels detecting small variants of low allele frequency. GENOME BIOLOGY. LONDON: BIOMED CENTRAL LTD, 2021, vol. 22, No 1, p. 111-148. ISSN 1474-760X. Available from: https://dx.doi.org/10.1186/s13059-021-02316-z.
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CHEN, W. T., David ŠMAJS, Y. F. HU, W. J. KE, Petra POSPÍŠILOVÁ, K. L. HAWLEY, M. J. CAIMANO, J. D. RADOLF, A. SENA, J. D. TUCKER, B. YANG, J. J. JULIANO, H. P. ZHENG and J. B. PARR. Analysis of Treponema pallidum Strains From China Using Improved Methods for Whole-Genome Sequencing From Primary Syphilis Chancres. The Journal of Infectious Diseases. Chicago: University of Chicago Press, 2021, vol. 223, No 5, p. 848-853. ISSN 0022-1899. Available from: https://dx.doi.org/10.1093/infdis/jiaa449.
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GONG, B.S., D. LI, R. KUSKO, N. NOVORADOVSKAYA, Y.F. ZHANG, S.Z. WANG, C. PABON-PENA, Z.H. ZHANG, K. LAI, W.S. CAI, J.S. LOCOCO, E. LADER, T.A. RICHMOND, V.K. MITTAL, L.C. LIU, D.J. JOHANN, J.C. WILLEY, P.R. BUSHEL, Y. YU, C. XU, G.C. CHEN, D. BURGESS, S. CAWLEY, K. GIORDA, N. HASELEY, F.J. QIU, K. WILKINS, H. ARIB, C. ATTWOOLL, K. BABSON, L.L. BAO, W.J. BAO, A.B. LUCAS, H. BEST, A. BHANDARI, H. BISGIN, J. BLACKBURN, T.M. BLOMQUIST, L. BOARDMAN, B. BURGHER, D.J. BUTLER, C.J. CHANG, A. CHAUBEY, T. CHEN, M. CHIERICI, C.R. CHIN, D. CLOSE, J. CONROY, J.C. COLEMAN, D.J. CRAIG, E. CRAWFORD, A. DEL POZO, I.W. DEVESON, D. DUNCAN, A.K. ETEROVIC, X.H. FAN, J. FOOX, C. FURLANELLO, A. GHOSAL, S. GLENN, M.J. GUAN, C. HAAG, X.Y. HANG, S. HAPPE, B. HENNIGAN, J. HIPP, H.X. HONG, K. HORVATH, J.H. HU, L.Y. HUNG, M. JAROSZ, J. KERKHOF, B. KIPP, D.P. KREIL, P. LAPUNZINA, P. LI, Q.Z. LI, W.H. LI, Z.G. LI, Y. LIANG, S.Q. LIU, Z.C. LIU, C. MA, N. MARELLA, R. MARTIN-ARENAS, D.B. MEGHERBI, Q.C. MENG, P.A. MIECZKOWSKI, T. MORRISON, D. MUZNY, B.T. NING, B.L. PARSONS, C.P. PAWELETZ, M. PIROOZNIA, W.B. QU, A. RAYMOND, P. RINDLER, R. RINGLER, B. SADIKOVIC, A. SCHERER, E. SCHULZE, R. SEBRA, R. SHAKNOVICH, Q. SHI, T.L. SHI, J.C. SILLA-CASTRO, M. SMITH, M.S. LOPEZ, P. SONG, D. STETSON, M. STRAHL, A. STUART, J. SUPPLEE, P. SZANKASI, H.W. TAN, L.Y. TANG, Y.H. TAO, S. THAKKAR, D. THIERRY-MIEG, J. THIERRY-MIEG, V.J. THODIMA, D. THOMAS, Boris TICHÝ, Nikola TOM, E.V. GARCIA, S. VERMA, K. WALKER, C. WANG, J.W. WANG, Y.X. WANG, Z.N. WEN, V. WIRTA, L.H. WU, C.L. XIAO, W.Z. XIAO, S.B. XU, M. YANG, J.M. YING, S.H. YIP, G.L. ZHANG, S. ZHANG, M.R. ZHAO, Y.T. ZHENG, X.Y. ZHOU, C.E. MASON, T. MERCER, W.D. TONG, L.M. SHI, W. JONES and J.S. XU. Cross-oncopanel study reveals high sensitivity and accuracy with overall analytical performance depending on genomic regions. GENOME BIOLOGY. LONDON: BIOMED CENTRAL LTD, 2021, vol. 22, No 1, p. 109-131. ISSN 1474-760X. Available from: https://dx.doi.org/10.1186/s13059-021-02315-0.
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HRALA, Matěj, Juraj BOSÁK, Lenka MICENKOVÁ, Jitka KŘENOVÁ, Matej LEXA, Viktória PIRKOVÁ, Zuzana TOMASTIKOVA, Ivana KOLÁČKOVÁ and David ŠMAJS. Escherichia coli Strains Producing Selected Bacteriocins Inhibit Porcine Enterotoxigenic Escherichia coli (ETEC) under both In Vitro and In Vivo Conditions. Applied and Environmental Microbiology. WASHINGTON, DC (USA): AMER SOC MICROBIOLOGY, 2021, vol. 87, No 14, p. 1-12. ISSN 0099-2240. Available from: https://dx.doi.org/10.1128/AEM.03121-20.
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GRILLOVÁ, Linda, M. T. ROBINSON, A. CHANTHONGTHIP, A. T. VINCENT, C. NIEVES, J. OPPELT, J. F. MARIET, C. LORIOUX, M. VONGSOUVATH, M. MAYXAY, O. PHONEMEEXAY, S. RATTANAVONG, K. PHOMMASONE, A. DOUANGNOUVONG, David ŠMAJS, F. J. VEYRIER, P. N. NEWTON and M. PICARDEAU. Genetic diversity of Leptospira isolates in Lao PDR and genome analysis of an outbreak strain. PLoS neglected tropical diseases. San Francisco: Public Library of Science, 2021, vol. 15, No 12, p. 1-19. ISSN 1935-2735. Available from: https://dx.doi.org/10.1371/journal.pntd.0010076.
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SUKOVÁ, Gabriela, Matěj HRALA, Vendula KOUBLOVÁ, Eva STAŇKOVÁ, Pavel ŠVEC and Ivo SEDLÁČEK. Characterisation of Escherichia coli isolated from Antarctic animals. Czech Polar Reports. Masarykova univerzita, 2021, Česká republika. ISSN 1805-0689.
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LORENCOVÁ, Erika, Luboš BERAN, Markéta NOVÁKOVÁ, Veronika HORSÁKOVÁ, Ben ROWSON, Jaroslav Č. HLAVÁČ, Jeffrey Clark NEKOLA and Michal HORSÁK. Invasion at the population level: a story of the freshwater snails Gyraulus parvus and G. laevis. Hydrobiologia. Springer Nature, 2021, vol. 848, No 19, p. 4661-4671. ISSN 0018-8158. Available from: https://dx.doi.org/10.1007/s10750-021-04668-w.
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BOSÁK, Juraj, Matěj HRALA, Lenka MICENKOVÁ and David ŠMAJS. Non-antibiotic antibacterial peptides and proteins ofEscherichia coli: efficacy and potency of bacteriocins. EXPERT REVIEW OF ANTI-INFECTIVE THERAPY. ABINGDON: TAYLOR & FRANCIS LTD, 2021, vol. 19, No 3, p. 309-322. ISSN 1478-7210. Available from: https://dx.doi.org/10.1080/14787210.2020.1816824.
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BOSÁK, Juraj, Matej LEXA, Kristýna FIEDOROVÁ, Darshak Chandulal GADARA, Lenka MICENKOVÁ, Zdeněk SPÁČIL, Jiří LITZMAN, Tomáš FREIBERGER and David ŠMAJS. Patients With Common Variable Immunodeficiency (CVID) Show Higher Gut Bacterial Diversity and Levels of Low-Abundance Genes Than the Healthy Housemates. Frontiers in Immunology. LAUSANNE: FRONTIERS MEDIA SA, 2021, vol. 12, May 2021, p. 1-13. ISSN 1664-3224. Available from: https://dx.doi.org/10.3389/fimmu.2021.671239.
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JEKL, Vladimír, Markéta NOVÁKOVÁ, Edita JEKLOVÁ, Petra POSPÍŠILOVÁ, Jitka KŘENOVÁ, Martin FALDYNA, Miša ŠKORIČ and David ŠMAJS. Penicillin Treatment Failure in Rabbit Syphilis Due to the Persistence of Treponemes (Treponema paraluisleporidarum Ecovar Cuniculus) in the Focus of Infection. Frontiers in Veterinary Science. Lausanne: Frontiers Media SA, 2021, vol. 8, June, p. "675631", 8 pp. ISSN 2297-1769. Available from: https://dx.doi.org/10.3389/fvets.2021.675631.
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SNOPKOVÁ, Kateřina, Kristýna DUFKOVÁ and David ŠMAJS. Pseudomonas prosekii isolated in Antarctica inhibits plantpathogenic strains of Pseudomonas viridiflava and Pseudomonas fluorescens. Czech Polar Reports. Brno: Masaryk University, Department of Experimental Biology, 2021, vol. 11, No 2, p. 270-278. ISSN 1805-0689. Available from: https://dx.doi.org/10.5817/CPR2021-2-18.
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GADARA, Darshak Chandulal, Kateřina COUFALÍKOVÁ, Juraj BOSÁK, David ŠMAJS and Zdeněk SPÁČIL. Systematic Feature Filtering in Exploratory Metabolomics: Application toward Biomarker Discovery. Analytical chemistry. WASHINGTON: AMER CHEMICAL SOC, 2021, vol. 93, No 26, p. 9103-9110. ISSN 0003-2700. Available from: https://dx.doi.org/10.1021/acs.analchem.1c00816.
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GRILLOVÁ, Linda, Jana MUSILOVA, Klára JANEČKOVÁ, Petra POSPÍŠILOVÁ, Ivana KUKLOVA, Vladana WOZNICOVÁ, Hana ZAKOUCKA and David ŠMAJS. The Arg753Gln Polymorphism of Toll-Like Receptor 2 Has a Lower Occurrence in Patients with Syphilis, Suggesting Its Protective Effect in Czech and Slovak Individuals. INFECTION AND IMMUNITY. WASHINGTON: American Society for Microbiology, 2021, vol. 89, No 1, p. 1-6. ISSN 0019-9567. Available from: https://dx.doi.org/10.1128/IAI.00503-20.
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HISGEN, L., L. ABEL, L. HALLMAIER-WACKER, S. LUERT, A. LAVAZZA, T. TROGU, R. VELARDE, Markéta NOVÁKOVÁ, M. GYURANECZ, E. AGREN, A. BARLOW, David ŠMAJS and S. KNAUF. The distribution of lagomorph syphilis caused by Treponema paraluisleporidarum in Europe. European Journal of Wildlife Research. NEW YORK: Springer, 2021, vol. 67, No 5, p. 1-6. ISSN 1612-4642. Available from: https://dx.doi.org/10.1007/s10344-021-01535-w.
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VRBOVÁ, Eliška, Lenka MIKALOVÁ, Linda GRILLOVÁ, Petra POSPÍŠILOVÁ, Radim STRNADEL, Eliška DASTYCHOVÁ, Martina KOJANOVA, Miluse KREIDLOVA, Daniela VANOUSOVA, Filip ROB, Premysl PROCHAZKA, Alena KRCHŇÁKOVÁ, Vladimír VAŠKŮ, Vladana WOZNICOVÁ, Monika DVOŘÁKOVÁ HEROLDOVÁ, Ivana KUKLOVA, Hana ZAKOUCKA and David ŠMAJS. A retrospective study on nested PCR detection of syphilis treponemes in clinical samples: PCR detection contributes to the diagnosis of syphilis in patients with seronegative and serodiscrepant results. Plos one. San Francisco: Public Library of Science, 2020, vol. 15, No 8, p. 1-11. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0237949.
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MICENKOVÁ, Lenka, Juraj BOSÁK, Stanislav SMATANA, Adam NOVOTNÝ, Eva BUDINSKÁ and David ŠMAJS. Administration of the Probiotic Escherichia coli Strain A0 34/86 Resulted in a Stable Colonization of the Human Intestine During the First Year of Life. Probiotics and Antimicrobial Proteins. New York: Springer New York LLC, 2020, vol. 12, No 2, p. 343-350. ISSN 1867-1306. Available from: https://dx.doi.org/10.1007/s12602-019-09548-3.
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KOHOUTOVA, Darina, Miroslava FORSTLOVA, Paula MORAVKOVA, Jiri CYRANY, Juraj BOSÁK, David ŠMAJS, Stanislav REJCHRT and Jan BURES. Bacteriocin production by mucosal bacteria in current and previous colorectal neoplasia. BMC Cancer. LONDON: BMC, 2020, vol. 20, No 1, p. 1-7. ISSN 1471-2407. Available from: https://dx.doi.org/10.1186/s12885-020-6512-5.
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JANEČEK, Jan, Markéta NOVÁKOVÁ, Jan OPPELT, Petra POSPÍŠILOVÁ, Anita CUNHA, Ana Catarina SILVA, Dantong LI and David ŠMAJS. Complete Chromosomal Sequences of Two Borrelia miyamotoi Samples Obtained from Ixodes ricinus Eggs in Czechia. Microbiology Resource Announcements. Washington, D.C.: American Society for Microbiology, 2020, vol. 9, No 14, p. 1-3. ISSN 2576-098X. Available from: https://dx.doi.org/10.1128/MRA.01504-19.
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SNOPKOVÁ, Kateřina, Darina ČEJKOVÁ, Kristýna DUFKOVÁ, Ivo SEDLÁČEK and David ŠMAJS. Genome sequences of two Antarctic strains of Pseudomonas prosekii: insights into adaptation to extreme conditions. Archives of Microbiology. New York: Springer, 2020, vol. 202, No 3, p. 447-454. ISSN 0302-8933. Available from: https://dx.doi.org/10.1007/s00203-019-01755-4.
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NODA, Angel A., Islay RODRIGUEZ and David ŠMAJS. Genotyping of Treponema pallidumin Cuba (2018-2019): Increased Circulation of Recombinant Genotype and No New Treponema pallidum Subspeciesendemicum Infection Among Syphilis Patients. Sexually transmitted diseases. Philadelphia: Lippincott Williams & Wilkins, 2020, vol. 47, No 10, p. "E39"-"E41", 3 pp. ISSN 0148-5717. Available from: https://dx.doi.org/10.1097/OLQ.0000000000001217.
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HISGEN, L., L. ABEL, L. K. HALLMAIER-WACKER, S. LUEERT, U. SIEBERT, M. FAEHNDRICH, E. STRAUSS, U. VOIGT, Markéta NOVÁKOVÁ, David ŠMAJS and S. KNAUF. High syphilis seropositivity in European brown hares (Lepus europaeus), Lower Saxony, Germany. Transboundary and Emerging Diseases. Hoboken: Wiley-Blackwell, 2020, vol. 67, No 5, p. 2240-2244. ISSN 1865-1674. Available from: https://dx.doi.org/10.1111/tbed.13551.
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ZONDAG, Helene C. A., Sylvia M. BRUISTEN, Eliška VRBOVÁ and David ŠMAJS. No bejel among Surinamese, Antillean and Dutch syphilis diagnosed patients in Amsterdam between 2006-2018 evidenced by multi-locus sequence typing of Treponema pallidum isolates. PLoS ONE. San Francisco: Public Library of Science, 2020, vol. 15, No 3, p. 1-10. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0230288.
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MIKALOVÁ, Lenka, Klára JANEČKOVÁ, Markéta NOVÁKOVÁ, Michal STROUHAL, Darina ČEJKOVÁ, K. N. HARPER and David ŠMAJS. Whole genome sequence of the Treponema pallidum subsp. endemicum strain Iraq B: A subpopulation of bejel treponemes contains full-length tprF and tprG genes similar to those present in T. p. subsp. pertenue strains. Plos One. San Francisco: Public Library Science, 2020, vol. 15, No 4, p. 1-16. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0230926.
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GRILLOVÁ, Linda, Keith JOLLEY, David ŠMAJS and Mathieu PICARDEAU. A public database for the new MLST scheme for Treponema pallidum subsp. pallidum: surveillance and epidemiology of the causative agent of syphilis. PeerJ. London: PEERJ INC, 2019, vol. 6, JAN 9 2019, p. 1-13. ISSN 2167-8359. Available from: https://dx.doi.org/10.7717/peerj.6182.
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FIEDOROVÁ, Kristýna, Matěj RADVANSKÝ, Juraj BOSÁK, Hana GROMBIŘÍKOVÁ, Eva NĚMCOVÁ, Pavlína KRÁLÍČKOVÁ, Michaela ČERNOCHOVÁ, Iva KOTÁSKOVÁ, Matej LEXA, Jiří LITZMAN, David ŠMAJS and Tomáš FREIBERGER. Bacterial and fungal gut microbiota analysis in common variable immunodeficiency (CVID) disorders: paired case-control study. In 2nd ESID Focused Meeting, Brussels. 2019.
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FIEDOROVÁ, Kristýna, Matěj RADVANSKÝ, Juraj BOSÁK, Hana GROMBIŘÍKOVÁ, Eva NĚMCOVÁ, Pavlina KRÁLÍČKOVÁ, Michaela ČERNOCHOVÁ, Iva KOTÁSKOVÁ, Matej LEXA, Jiří LITZMAN, David ŠMAJS and Tomáš FREIBERGER. Bacterial but Not Fungal Gut Microbiota Alterations Are Associated With Common Variable Immunodeficiency (CVID) Phenotype. Frontiers in Immunology. LAUSANNE: FRONTIERS MEDIA SA, 2019, vol. 10, No 1914, p. 1-14. ISSN 1664-3224. Available from: https://dx.doi.org/10.3389/fimmu.2019.01914.
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DOLEJSOVA, Tereza, Albert SOKOL, Juraj BOSÁK, David ŠMAJS, Ivo KONOPASEK, Gabriela MIKUSOVA and Radovan FISER. Colicin U from Shigella boydii Forms Voltage-Dependent Pores. Journal of Bacteriology. Washington: American Society for Microbiology, 2019, vol. 201, No 24, p. 1-16. ISSN 0021-9193. Available from: https://dx.doi.org/10.1128/JB.00493-19.
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MICENKOVÁ, Lenka, Juraj BOSÁK, Jiří KUČERA, Matěj HRALA, Tereza DOLEJSOVA, Ondrej ŠEDO, Dirk LINKE, Radovan FISER and David ŠMAJS. Colicin Z, a structurally and functionally novel colicin type that selectively kills enteroinvasive Escherichia coli and Shigella strains. Scientific reports. LONDON: NATURE PUBLISHING GROUP, 2019, vol. 9, JUL 31 2019, p. 1-12. ISSN 2045-2322. Available from: https://dx.doi.org/10.1038/s41598-019-47488-8.
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GRILLOVÁ, Linda, Jan OPPELT, Lenka MIKALOVÁ, Markéta NOVÁKOVÁ, LLorenzo GIACANI, Anežka NIESNEROVÁ, Angel A. NODA, Ariel E. MECHALY, Petra POSPÍŠILOVÁ, Darina CEJKOVA, Philippe A. GRANGE, Nicolas DUPIN, Radim STRNADEL, Marcus CHEN, Ian DENHAM, Natasha ARORA, Mathieu PICARDEAU, Christopher WESTON, R. Allyn FORSYTH and David ŠMAJS. Directly Sequenced Genomes of Contemporary Strains of Syphilis Reveal Recombination-Driven Diversity in Genes Encoding Predicted Surface-Exposed Antigens. Frontiers in Microbiology. Lausanne: Frontiers Media SA, 2019, vol. 10, JUL 31 2019, p. 1-14. ISSN 1664-302X. Available from: https://dx.doi.org/10.3389/fmicb.2019.01691.
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BOSÁKOVÁ, Michaela, Alexandru NITĂ, Tomáš GREGOR, Miroslav VAŘECHA, Iva GUDERNOVÁ, Bohumil FAFÍLEK, Tomáš BÁRTA, Neha BASHEER, Sara POOVAKULATHU ABRAHAM, Lukáš BÁLEK, Markéta TOMANOVÁ, Jana FIALOVÁ KUČEROVÁ, Juraj BOSÁK, David POTĚŠIL, Jennifer ZIEBA, Jieun SONG, Peter KONIK, Sohyun PARK, Ivan DURAN, Zbyněk ZDRÁHAL, David ŠMAJS, Gert JANSEN, Zheng FU, Hyuk Wan KO, Aleš HAMPL, Lukáš TRANTÍREK, Deborah KRAKOW and Pavel KREJČÍ. Fibroblast growth factor receptor influences primary cilium length through an interaction with intestinal cell kinase. Proceedings of the National Academy of Sciences of the United States of America. WASHINGTON: NATL ACAD SCIENCES, 2019, vol. 116, No 10, p. 4316-4325. ISSN 0027-8424. Available from: https://dx.doi.org/10.1073/pnas.1800338116.
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NOVÁKOVÁ, Markéta, David NAJT, Lenka PAŠTĚKOVÁ, Marcela KOSTKOVA, Eliška VRBOVÁ, Michal STROUHAL, Annika POSAUTZ, Sascha KNAUF and David ŠMAJS. First report of hare treponematosis seroprevalence of European brown hares (Lepus europaeus) in the Czech Republic: seroprevalence negatively correlates with altitude of sampling areas. BMC Veterinary Research. LONDON: BIOMED CENTRAL LTD, 2019, vol. 15, No 1, p. 1-7. ISSN 1746-6148. Available from: https://dx.doi.org/10.1186/s12917-019-2086-3.
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GRILLOVÁ, Linda and David ŠMAJS. Genetic Stability of the Typing Loci Used in the Multilocus Sequence Typing and Enhanced CDC Typing of Syphilis Treponemes. Sexually transmitted diseases. Philadelphia: Lippincott Williams & Wilkins, 2019, vol. 46, No 6, p. "E70"-"E70", 1 pp. ISSN 0148-5717. Available from: https://dx.doi.org/10.1097/OLQ.0000000000000981.
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FIEDOROVÁ, Kristýna, Matěj RADVANSKÝ, Pavlína KRÁLÍČKOVÁ, Michaela ČERNOCHOVÁ, Eva NĚMCOVÁ, Hana GROMBIŘÍKOVÁ, Juraj BOSÁK, Matej LEXA, David ŠMAJS, Jiří LITZMAN and Tomáš FREIBERGER. Gut microbiome analysis in common variable immunodeficiency (CVID) patients and paired healthy controls sharing the same household. In 29th European Congress of Clinical Microbiology & Infectious Diseases. 2019.
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MADERANKOVA, Denisa, Lenka MIKALOVÁ, Michal STROUHAL, Simon VADJAK, Ivana KUKLOVA, Petra POSPÍŠILOVÁ, Lenka KRBKOVÁ, Pavlina KOSCOVA, Ivo PROVAZNIK and David ŠMAJS. Identification of positively selected genes in human pathogenic treponemes: Syphilis-, yaws-, and bejel-causing strains differ in sets of genes showing adaptive evolution. PLoS neglected tropical diseases. San Francisco: Public Library of Science, 2019, vol. 13, No 6, p. 1-18. ISSN 1935-2735. Available from: https://dx.doi.org/10.1371/journal.pntd.0007463.
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VRBOVÁ, Eliška, Linda GRILLOVÁ, Lenka MIKALOVÁ, Petra POSPÍŠILOVÁ, Radim STRNADEL, Eliška DASTYCHOVÁ, Martina KOJANOVA, Miluse KREIDLOVA, Daniela VANOUSOVA, Filip ROB, Premysl PROCHAZKA, Alena KRCHŇÁKOVÁ, Vladimír VAŠKŮ, Vladana WOZNICOVÁ, Monika DVOŘÁKOVÁ HEROLDOVÁ, Ivana KUKLOVA, Hana ZAKOUCKA and David ŠMAJS. MLST typing of Treponema pallidum subsp. pallidum in the Czech Republic during 2004-2017: Clinical isolates belonged to 25 allelic profiles and harbored 8 novel allelic variants. Plos one. San Francisco: Public Library of Science, 2019, vol. 14, No 5, p. 1-15. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0217611.
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GRILLOVÁ, Linda, Angel A. NODA, Reto LIENHARD, Orestes BLANCO, Islay RODRIGUEZ and David ŠMAJS. Multilocus Sequence Typing of Treponema pallidum subsp. pallidum in Cuba From 2012 to 2017. The Journal of Infectious Diseases. Chicago: University of Chicago Press, 2019, vol. 219, No 7, p. 1138-1145. ISSN 0022-1899. Available from: https://dx.doi.org/10.1093/infdis/jiy604.
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BOSÁK, Juraj, Matěj HRALA, Viktória PIRKOVÁ, Lenka MICENKOVÁ, Alois CIZEK, Jiri SMOLA, Dana KUCEROVA, Zdenka VACKOVA, Eva BUDINSKÁ, Ivana KOLÁČKOVÁ and David ŠMAJS. Porcine pathogenic Escherichia coli strains differ from human fecal strains in occurrence of bacteriocin types. Veterinary Microbiology. AMSTERDAM: Elsevier, 2019, vol. 232, MAY 2019, p. 121-127. ISSN 0378-1135. Available from: https://dx.doi.org/10.1016/j.vetmic.2019.04.003.
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CHUMA, Idrissa S., Christian ROOS, Anagaw ATICKEM, Torsten BOHM, D. Anthony COLLINS, Linda GRILLOVÁ, Luisa K. HALLMAIER-WACKER, Rudovick R. KAZWALA, Julius D. KEYYU, Simone LUERT, Ulrich MALOUEKI, Jan OPPELT, Klara J. PETRZELKOVA, Alexander PIEL, Fiona A. STEWART, David ŠMAJS and Sascha KNAUF. Strain diversity of Treponema pallidum subsp. pertenue suggests rare interspecies transmission in African nonhuman primates. Scientific reports. LONDON: NATURE PUBLISHING GROUP, 2019, vol. 9, OCT 2 2019, p. 1-9. ISSN 2045-2322. Available from: https://dx.doi.org/10.1038/s41598-019-50779-9.
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FIEDOROVÁ, Kristýna, Matěj RADVANSKÝ, Eva NĚMCOVÁ, Hana GROMBIŘÍKOVÁ, Juraj BOSÁK, Michaela ČERNOCHOVÁ, Matej LEXA, David ŠMAJS and Tomáš FREIBERGER. The Impact of DNA Extraction Methods on Stool Bacterial and Fungal Microbiota Community Recovery. Frontiers in Microbiology. Lausanne: Frontiers Media SA, 2019, vol. 10, No 821, p. 1-11. ISSN 1664-302X. Available from: https://dx.doi.org/10.3389/fmicb.2019.00821.
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FIEDOROVÁ, Kristýna, Matěj RADVANSKÝ, Hana GROMBIŘÍKOVÁ, Eva NĚMCOVÁ, Juraj BOSÁK, Matej LEXA, David ŠMAJS and Tomáš FREIBERGER. Artificial fungal community (fMOCK) as a control of sequencing process in mycobiome research. In In 6th World Congress on Targeting Microbiota, Porto. 2018.
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NODA, A.A., Linda GRILLOVÁ, R. LIENHARD, O. BLANCO, I. RODRIGUEZ and David ŠMAJS. Bejel in Cuba: molecular identification of Treponema pallidum subsp endemicum in patients diagnosed with venereal syphilis. Clinical Microbiology and Infection. NJ USA: WILEY-BLACKWELL, 2018, vol. 24, No 11, p. 1-5. ISSN 1198-743X. Available from: https://dx.doi.org/10.1016/j.cmi.2018.02.006.
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BOSÁK, Juraj, Lenka MICENKOVÁ, Matěj HRALA, Katarína POMORSKÁ, Michaela BOSÁKOVÁ, Pavel KREJČÍ, Eduard GÖPFERT, Martin FALDYNA and David ŠMAJS. Colicin F-Y inhibits pathogenic Yersinia enterocolitica in mice. Scientific reports. London: NATURE PUBLISHING GROUP, 2018, vol. 8, No 12242, p. 1-12. ISSN 2045-2322. Available from: https://dx.doi.org/10.1038/s41598-018-30729-7.
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STROUHAL, Michal, Lenka PAŠTĚKOVÁ, Jan HAVIERNIK, Sascha KNAUF, Sylvia BRUISTEN, Gerda T. NOORDHOEK, Jan OPPELT, Darina ČEJKOVÁ and David ŠMAJS. Complete genome sequences of two strains of Treponema pallidum subsp pertenue from Indonesia: Modular structure of several treponemal genes. PLoS neglected tropical diseases. San Francisco: Public Library of Science, 2018, vol. 12, No 10, p. 0006867-6886. ISSN 1935-2735. Available from: https://dx.doi.org/10.1371/journal.pntd.0006867.
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MICENKOVÁ, Lenka, Lucia FRANKOVIČOVÁ, Iva JABORNÍKOVÁ, Juraj BOSÁK, Petr DÍTĚ, Jan ŠMARDA, Martin VRBA, Alena ŠEVČÍKOVÁ, Marta KMEŤOVÁ and David ŠMAJS. Escherichia coli isolates from patients with inflammatory bowel disease: ExPEC virulence- and colicin-determinants are more frequent compared to healthy controls. International Journal of Medical Microbiology. JENA: Urban & Fischer Verlag, 2018, vol. 308, No 5, p. 498-504. ISSN 1438-4221. Available from: https://dx.doi.org/10.1016/j.ijmm.2018.04.008.
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SNOPKOVÁ, Kateřina, Ivo SEDLÁČEK and David ŠMAJS. First evidence of high-molecular-weight bacteriocin (tailocin) produced by Antarctic Pseudomonas spp. Czech Polar Reports. 2018, 8/2, p. 178-185. ISSN 1805-0697.
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KNAUF, Sascha, Simone LUERT, David ŠMAJS, Michal STROUHAL, Idrissa S. CHUMA, Sieghard FRISCHMANN and Mohammed BAKHEIT. Gene target selection for loop-mediated isothermal amplification for rapid discrimination of Treponema pallidum subspecies. PLoS neglected tropical diseases. San Francisco: Public Library of Science, 2018, vol. 12, No 4, p. 1-14. ISSN 1935-2735. Available from: https://dx.doi.org/10.1371/journal.pntd.0006396.
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ŠMAJS, David, Michal STROUHAL and Sascha KNAUF. Genetics of human and animal uncultivable treponemal pathogens. Infection, Genetics and Evolution. Amsterdam: Elsevier Science, 2018, vol. 61, JUL 2018, p. 92-107. ISSN 1567-1348. Available from: https://dx.doi.org/10.1016/j.meegid.2018.03.015.
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FIEDOROVÁ, Kristýna, Matěj RADVANSKÝ, Králíčková PAVLÍNA, Černochová MICHAELA, Eva NĚMCOVÁ, Hana GROMBIŘÍKOVÁ, Juraj BOSÁK, Matej LEXA, David ŠMAJS, Jiří LITZMAN and Tomáš FREIBERGER. Gut microbiome analysis in common variable immunodeficiency (CVID) patients. In 18th Biennial meeting of the European Society for immunodeficiencies, Lisbon. 2018.
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GRILLOVÁ, Linda, Ivo SEDLÁČEK, Gabriela PÁCHNIKOVÁ, Eva STAŇKOVÁ, Pavel ŠVEC, Pavla HOLOCHOVÁ, Lenka MICENKOVÁ, Juraj BOSÁK, Iva SLANINOVÁ and David ŠMAJS. Characterization of four Escherichia albertii isolates collected from animals living in Antarctica and Patagonia. JOURNAL OF VETERINARY MEDICAL SCIENCE. Tokyo: JAPAN SOC VET SCI, 2018, vol. 80, No 1, p. 138-146. ISSN 0916-7250. Available from: https://dx.doi.org/10.1292/jvms.17-0492.
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NOVÁKOVÁ, Markéta, Petr HENEBERG, Dieter J.A. HEYLEN, Matej MEDVECKÝ, Sebastián MUNOZ-LEAL, David ŠMAJS and Ivan LITERAK. Isolated populations of Ixodes lividus ticks in the Czech Republic and Belgium host genetically homogeneous Rickettsia vini. Ticks and Tick-borne Diseases. Jena: Elsevier GmbH, 2018, vol. 9, No 3, p. 479-484. ISSN 1877-959X. Available from: https://dx.doi.org/10.1016/j.ttbdis.2017.12.018.
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PAŠTĚKOVÁ, Lenka and David ŠMAJS. Low-dose versus standard-dose azithromycin for treatment of yaws. LANCET GLOBAL HEALTH. OXFORD: ELSEVIER SCI LTD, 2018, vol. 6, No 4, p. "E357"-"E358", 2 pp. ISSN 2214-109X. Available from: https://dx.doi.org/10.1016/S2214-109X(18)30067-6.
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ŠMAJS, David and Petra POSPÍŠILOVÁ. Macrolide resistance in yaws. Lancet. NEW YORK: ELSEVIER SCIENCE INC, 2018, vol. 391, No 10130, p. 1555-1556. ISSN 0140-6736. Available from: https://dx.doi.org/10.1016/S0140-6736(18)30205-8.
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GRILLOVÁ, Linda, Tanika BAWA, Lenka PAŠTĚKOVÁ, Angele GAYET-AGERON, Kay NIESELT, Michal STROUHAL, Patrice SEDNAOUI, Tristan FERRY, Matthias CAVASSINI, Stephan LAUTENSCHLAGER, Fabrizio DUTLY, Marta PLA-DIAZ, Michael KRUTZEN, Fernando GONZALEZ-CANDELAS, Homayoun C. BAGHERI, David ŠMAJS, Natascha ARORA and Philipp P. BOSSHARD. Molecular characterization of Treponema pallidum subsp pallidum in Switzerland and France with a new multilocus sequence typing scheme. Plos one. San Francisco: Public Library of Science, 2018, vol. 13, No 7, p. 1-16. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0200773.
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POSPÍŠILOVÁ, Petra, Philippe Alain GRANGE, Linda GRILLOVÁ, Lenka PAŠTĚKOVÁ, Pervenche MARTINET, Michel JANIER, Annie VERMERSCH, Nadjet BENHADDOU, Pascal DEL GIUDICE, Isabelle ALCARAZ, Francois TRUCHETET, Nicolas DUPIN and David ŠMAJS. Multi-locus sequence typing of Treponema pallidum subsp pallidum present in clinical samples from France: Infecting treponemes are genetically diverse and belong to 18 allelic profiles. Plos one. San Francisco: Public Library of Science, 2018, vol. 13, No 7, p. 1-17. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0201068.
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KNAUF, Sascha, Jan F. GOGARTEN, Verena J. SCHUENEMANN, Helene M. DE NYS, Ariane DUX, Michal STROUHAL, Lenka PAŠTĚKOVÁ, Kirsten I. BOS, Roy ARMSTRONG, Emmanuel K. BATAMUZI, Idrissa S. CHUMA, Bernard DAVOUST, Georges DIATTA, Robert D. FYUMAGWA, Reuben R. KAZWALA, Julius D. KEYYU, Inyasi A. V. LEJORA, Anthony LEVASSEUR, Hsi LIU, Michael A. MAYHEW, Oleg MEDIANNIKOV, Didier RAOULT, Roman M. WITTIG, Christian ROOS, Fabian H. LEENDERTZ, David ŠMAJS, Kay NIESELT, Johannes KRAUSE and Sebastien CALVIGNAC-SPENCER. Nonhuman primates across sub-Saharan Africa are infected with the yaws bacterium Treponema pallidum subsp pertenue. EMERGING MICROBES & INFECTIONS. LONDON: NATURE PUBLISHING GROUP, 2018, vol. 7, No 157, p. 1-4. ISSN 2222-1751. Available from: https://dx.doi.org/10.1038/s41426-018-0156-4.
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STROUHAL, Michal, Jan OPPELT, Lenka MIKALOVÁ, Natasha ARORA, Kay NIESELT, Fernando GONZÁLEZ-CANDELAS and David ŠMAJS. Reanalysis of Chinese Treponema pallidum samples: all Chinese samples cluster with SS14-like group of syphilis-causing treponemes. BMC Research Notes. London: BioMed Central Ltd., 2018, vol. 11, No 1, p. 1-5. ISSN 1756-0500. Available from: https://dx.doi.org/10.1186/s13104-017-3106-7.
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KUMAR, Sanjiv), Melissa J. CAIMANO, Arvind ANAND, Abhishek DEY, Kelly L. HAWLEY, Morgan E. LEDOYT, Carson J. LA VAKE, Adriana R. CRUZ, Lady G. RAMIREZ, Lenka PAŠTĚKOVÁ, Irina BEZSONOVA, David ŠMAJS, Juan C. SALAZAR and Justin D. RADOLF. Sequence Variation of Rare Outer Membrane Protein beta-Barrel Domains in Clinical Strains Provides Insights into the Evolution of Treponema pallidum subsp. pallidum, the Syphilis Spirochete. MBIO. WASHINGTON: AMER SOC MICROBIOLOGY, 2018, vol. 9, No 3, p. 1-20. ISSN 2150-7511. Available from: https://dx.doi.org/10.1128/mBio.01006-18.
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GRILLOVÁ, Linda, Lorenzo GIACANI, Lenka PAŠTĚKOVÁ, Michal STROUHAL, Radim STRNADEL, Christina MARRA, Arturo CENTURION-LARA, Lucy POVEDA, Giancarlo RUSSO, Darina ČEJKOVÁ, Vladimír VAŠKŮ, Jan OPPELT and David ŠMAJS. Sequencing of Treponema pallidum subsp pallidum from isolate UZ1974 using Anti-Treponemal Antibodies Enrichment: First complete whole genome sequence obtained directly from human clinical material. Plos one. San Francisco: Public Library Science, 2018, vol. 13, No 8, p. 1-14. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0202619.
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SNOPKOVÁ, Kateřina, Kristýna DUFKOVÁ, Darina ČEJKOVÁ, Ivo SEDLÁČEK and David ŠMAJS. The genome sequence of Pseudomonas prosekii, a novel Antarctic bacterium. In Proceedings: Students in Polar and Alpine Research Conference 2018. 2018. ISBN 978-80-210-8957-0.
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FAFÍLEK, Bohumil, Lukáš BÁLEK, Michaela BOSÁKOVÁ, Miroslav VAŘECHA, Alexandru NITĂ, Tomáš GREGOR, Iva GUDERNOVÁ, Jitka KŘENOVÁ, S. GHOSH, Martin PISKÁČEK, Lucie JONATOVA, Nicole ČERNOHORSKÁ, J.T. ZIEBA, M. KOSTAS, E.M. HAUGSTEN, J. WESCHE, C. ERNEUX, Lukáš TRANTÍREK, D. KRAKOW and Pavel KREJČÍ. The inositol phosphatase SHIP2 enables sustained ERK activation downstream of FGF receptors by recruiting Src kinases. SCIENCE SIGNALING. WASHINGTON: AMER ASSOC ADVANCEMENT SCIENCE, 2018, vol. 11, No 548, p. 1-14. ISSN 1945-0877. Available from: https://dx.doi.org/10.1126/scisignal.aap8608.
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FIEDOROVÁ, Kristýna, Eva NĚMCOVÁ, Hana GROMBIŘÍKOVÁ, Michaela ČERNOCHOVÁ, Lenka DAVIDOVÁ GERŽOVÁ, David ŠMAJS and Tomáš FREIBERGER. Comparison of five bacterial DNA extraction methods from germ-free mice fecal samples. In Food, Microbiota and Immunity, Třešť. 2017.
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BOSÁK, Juraj, Lenka MIKALOVÁ, Darina ČEJKOVÁ, Jan ŠMARDA and David ŠMAJS. Complete genome sequence of bacteriophage SEN8, a temperate phage isolated from salmonella enterica subsp. salamae. Genome Announcements. Washington: American Society for Microbiology, 2017, vol. 5, No 19, p. 1-2. ISSN 2169-8287. Available from: https://dx.doi.org/10.1128/genomeA.00239-17.
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STROUHAL, Michal, Lenka PAŠTĚKOVÁ, Pavla HAVLÍČKOVÁ, Paolo TENTI, Darina ČEJKOVÁ, Ivan RYCHLÍK, Sylvia BRUISTEN and David ŠMAJS. Complete genome sequences of two strains of Treponema pallidum subsp. pertenue from Ghana, Africa: Identical genome sequences in samples isolated more than 7 years apart. PLOS Neglected Tropical Diseases. San Francisco: Public Library of Science, 2017, vol. 11, No 9, p. 1-17. ISSN 1935-2735. Available from: https://dx.doi.org/10.1371/journal.pntd.0005894.
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SNOPKOVÁ, Kateřina, Karel SEDLÁŘ, Juraj BOSÁK, Eva CHALOUPKOVÁ, Ivo SEDLÁČEK, Ivo PROVAZNÍK and David ŠMAJS. Free-Living Enterobacterium Pragia fontium 24613: Complete Genome Sequence and Metabolic Profiling. Evolutionary Bioinformatics. London: Sage Publications LTD, 2017, vol. 13, No 1176934317700863, p. 1-7. ISSN 1176-9343. Available from: https://dx.doi.org/10.1177/1176934317700863.
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FIEDOROVÁ, Kristýna, Juraj BOSÁK, Barbora ZWINSOVÁ, Matej LEXA, Jiří LITZMAN, Tomáš FREIBERGER and David ŠMAJS. Gastrointestinal microbiome in patients with primary immune deficiencies. In Food, Microbiota and Immunity, Třešť. 2017.
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MICENKOVÁ, Lenka, Alžbeta BEŇOVÁ, Lucia FRANKOVIČOVÁ, Juraj BOSÁK, Martin VRBA, Alena ŠEVČÍKOVÁ, Marta KMEŤOVÁ and David ŠMAJS. Human Escherichia coli isolates from hemocultures: Septicemia linked to urogenital tract infections is caused by isolates harboring more virulence genes than bacteraemia linked to other conditions. International Journal of Medical Microbiology. Jena: Elsevier GmbH, 2017, vol. 307, No 3, p. 182-189. ISSN 1438-4221. Available from: https://dx.doi.org/10.1016/j.ijmm.2017.02.003.
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MIKALOVÁ, Lenka, Michal STROUHAL, Jan OPPELT, Philippe Alain GRANGE, Michel JANIER, Nadjet BENHADDOU, Nicolas DUPIN and David ŠMAJS. Human Treponema pallidum 11q/j isolate belongs to subsp. endemicum but contains two loci with a sequence in TP0548 and TP0488 similar to subsp. pertenue and subsp. pallidum, respectively. PLoS neglected tropical diseases. San Francisco: Public Library of Science, 2017, vol. 11, No 3, p. 1-14. ISSN 1935-2735. Available from: https://dx.doi.org/10.1371/journal.pntd.0005434.
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MIKALOVÁ, Lenka, Linda GRILLOVÁ, Kara OSBAK, Michal STROUHAL, Chris KENYON, Tania CRUCITTI and David ŠMAJS. Molecular Typing of Syphilis-Causing Strains Among Human Immunodeficiency Virus-Positive Patients in Antwerp, Belgium. Sexually Transmitted Diseases. Philadelphia: Lippincott Williams & Wilkins, 2017, vol. 44, No 6, p. 376-379. ISSN 0148-5717. Available from: https://dx.doi.org/10.1097/OLQ.0000000000000600.
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VAULET, Lucía Gallo, Linda GRILLOVÁ, Lenka MIKALOVÁ, Ricardo CASCO, Marcelo Rodríguez FERMEPIN, María A. PANDO and David ŠMAJS. Molecular typing of Treponema pallidum isolates from Buenos Aires, Argentina: Frequent Nichols-like isolates and low levels of macrolide resistance. Plos one. San Francisco: Public Library of Science, 2017, vol. 12, No 2, p. 1-14. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0172905.
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MIKALOVÁ, Lenka, Juraj BOSÁK, Hana HŘÍBKOVÁ, Daniela DĚDIČOVÁ, Oldřich BENADA, Jan ŠMARDA and David ŠMAJS. Novel Temperate Phages of Salmonella enterica subsp salamae and subsp diarizonae and Their Activity against Pathogenic S-enterica subsp enterica Isolates. Plos one. San Francisco: Public Library of Science, 2017, vol. 12, No 1, p. 1-14. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0170734.
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ARORA, Natasha, Verena J. SCHUENEMANN, Günter JÄGER, Alexander PELTZER, Alexander SEITZ, Alexander HERBIG, Michal STROUHAL, Linda GRILLOVÁ, Leonor SÁNCHEZ-BUSÓ, Denise KÜHNERT, Kirsten I. BOS, Leyla Rivero DAVIS, Lenka MIKALOVÁ, Sylvia BRUISTEN, Peter KOMERICKI, Patrik FRENCH, Paul R. GRANT, María A. PANDO, Lucía Gallo VAULET, Marcelo Rodríguez FERMEPIN, Antonio MARTINEZ, Arturo Centurion LARA, Lorenzo GIACANI, Steven J. NORRIS, David ŠMAJS, Philipp BOSSHARD, Fernando GONZÁLEZ-CANDELAS, Kay NIESELT, Johannes KRAUSE and Homayoun C. BAGHERI. Origin of modern syphilis and emergence of a pandemic Treponema pallidum cluster. Nature Microbiology. London: Nature Publishing Group, 2017, vol. 2, No 1, p. 1-6. ISSN 2058-5276. Available from: https://dx.doi.org/10.1038/nmicrobiol.2016.245.
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BOSÁK, Juraj, Lenka MICENKOVÁ, Magda DOLEŽALOVÁ and David ŠMAJS. Colicins U and Y inhibit growth of Escherichia coli strains via recognition of conserved OmpA extracellular loop 1. International Journal of Medical Microbiology. Jena: Elsevier GMBH, 2016, vol. 306, No 7, p. 486-494. ISSN 1438-4221. Available from: https://dx.doi.org/10.1016/j.ijmm.2016.07.002.
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FIEDOROVÁ, Kristýna, Tereza KUBASOVÁ, Hana OBRUČOVÁ, Juraj BOSÁK, David ŠMAJS, Jiří LITZMAN and Tomáš FREIBERGER. Gut microbiome in patients with Antibody deficiency disorders. In 3rd Microbiome R&D and Business Collaboration Forum: Europe, London. 2016.
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MICENKOVÁ, Lenka, Juraj BOSÁK, Martin VRBA, Alena ŠEVČÍKOVÁ and David ŠMAJS. Human extraintestinal pathogenic Escherichia coli strains differ in prevalence of virulence factors, phylogroups, and bacteriocin determinants. BMC Microbiology. London: BioMed Central, 2016, vol. 16, No 218, p. 1-8. ISSN 1471-2180. Available from: https://dx.doi.org/10.1186/s12866-016-0835-z.
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OSBAK, Kara K., Simon HOUSTON, Karen V. LITHGOW, Conor J. MEEHAN, Michal STROUHAL, David ŠMAJS, Caroline E. CAMERON, Xaveer Van OSTADE, Chris R. KENYON and Geert A. Van RAEMDONCK. Characterizing the Syphilis-Causing Treponema pallidum ssp pallidum Proteome Using Complementary Mass Spectrometry. PLoS neglected tropical diseases. San Francisco: Public Library of Science, 2016, vol. 10, No 9, p. 1-29. ISSN 1935-2735. Available from: https://dx.doi.org/10.1371/journal.pntd.0004988.
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KNAUF, Sascha, Jane RAPHAEL, Oriol MITJÀ, Inyasi A. V. LEJORA, Idrissa S. CHUMA, Emmanuel K. BATAMUZI, Julius D. KEYYU, Robert FYUMAGWA, Simone LÜERT, Charmie GODORNES, Hsi LIU, Christiane SCHWARZ, David ŠMAJS, Philippe GRANGE, Dietmar ZINNER, Christian ROOS and Sheila A. LUKEHART. Isolation of Treponema DNA from Necrophagous Flies in a Natural Ecosystem. EBioMedicine. Amsterdam: Elsevier Science BV, 2016, vol. 11, "neuvedeno", p. 85-90. ISSN 2352-3964. Available from: https://dx.doi.org/10.1016/j.ebiom.2016.07.033.
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MICENKOVÁ, Lenka, Juraj BOSÁK, Barbora ŠTAUDOVÁ, D. KOHOUTOVA, D. CEJKOVA, Vladana WOZNICOVÁ, M. VRBA, Alena ŠEVČÍKOVÁ, J. BURES and David ŠMAJS. Microcin determinants are associated with B2 phylogroup of human fecal Escherichia coli isolates. MicrobiologyOpen. Hoboken: Wiley-Blackwell, 2016, vol. 5, No 3, p. 490-498. ISSN 2045-8827. Available from: https://dx.doi.org/10.1002/mbo3.345.
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ŠMAJS, David, Juraj BOSÁK, Katarína POMORSKÁ, Matěj HRALA and Jana RŮŽIČKOVÁ. Technologie s vlastnostmi ověřenými in vivo (Technology with the features verified in vivo). Masarykova univerzita, 2016.
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RADOLF, Justin D., Ranjit K. DEKA, Arvind ANAND, David ŠMAJS, Michael V. NORGARD and X. Frank YANG. Treponema pallidum, the syphilis spirochete: making a living as a stealth pathogen. Nature Reviews Microbiology. London: Nature Publishing Group, 2016, vol. 14, No 12, p. 744-759. ISSN 1740-1526. Available from: https://dx.doi.org/10.1038/nrmicro.2016.141.
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GRANGE, Philippe Alain, Lenka MIKALOVÁ, Cyrill GAUDIN, Michal STROUHAL, Michel JANIER, Nadjet BENHADDOU, David ŠMAJS and Nicolas DUPIN. Treponema pallidum 11qj Subtype May Correspond to a Treponema pallidum Subsp Endemicum Strain. Sexually transmitted diseases. Philadelphia: Lippincott Williams & Wilkins, 2016, vol. 43, No 8, p. 517-518. ISSN 0148-5717.
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GRILLOVÁ, Linda, Jan OPPELT, Lucy POVEDA, Giancarlo RUSSO, Radim STRNADEL and David ŠMAJS. Whole genome sequencing of Treponema pallidum DNA directly from human samples. In Spirochetes, Biology of Gordon Research Conference. 2016.
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ČEJKOVÁ, Darina, Michal STROUHAL, Steven J. NORRIS, George M. WEINSTOCK and David ŠMAJS. A Retrospective Study on Genetic Heterogeneity within Treponema Strains: Subpopulations Are Genetically Distinct in a Limited Number of Positions. PLoS Neglected Tropical Diseases. San Francisco: Public Library of Science, 2015, vol. 9, No 10, p. 1-19. ISSN 1935-2735. Available from: https://dx.doi.org/10.1371/journal.pntd.0004110.
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SNOPKOVÁ, Kateřina, Ivo SEDLÁČEK and David ŠMAJS. Cold-active antimicrobial agents produced by Antarctic pseudomonads. In 6th International Conference on Polar and Alpine Microbiology. 2015.
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SNOPKOVÁ, Kateřina, Karel SEDLÁŘ, Juraj BOSÁK, Eva CHALOUPKOVÁ, Ivo PROVAZNÍK and David ŠMAJS. Complete Genome Sequence of Pragia fontium 24613, an Environmental Bacterium from the Family Enterobacteriaceae. Genome Announcements. Washington: American Society for Microbiology, 2015, vol. 3, No 4, p. "e00740-15", 1 pp. ISSN 2169-8287. Available from: https://dx.doi.org/10.1128/genomeA.00740-15.
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ŠTAUDOVÁ, Barbora, Lenka MICENKOVÁ, Juraj BOSÁK, Kristýna HRAZDILOVÁ, Eva SLANINKOVÁ, Martin VRBA, Alena ŠEVČÍKOVÁ, Darina KOHOUTOVÁ, Vladana WOZNICOVÁ, Jan BUREŠ and David ŠMAJS. Determinants encoding fimbriae type 1 in fecal Escherichia coli are associated with increased frequency of bacteriocinogeny. BMC Microbiology. London: BioMed Central, 2015, vol. 15, No 201, p. 1-9. ISSN 1471-2180. Available from: https://dx.doi.org/10.1186/s12866-015-0530-5.
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MICENKOVÁ, Lenka, Katarína POMORSKÁ and David ŠMAJS. Genetic diversity of colicin E1 and fimbriae type I in Escherichia coli strains. In In 6th Congress of European Microbiologists. Maastricht. 2015.
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KUDEROVÁ, Alena, Lucia GALLOVÁ, Katarína KURICOVÁ, Eliška NEJEDLÁ, Anna ČURDOVÁ, Lenka MICENKOVÁ, Ondřej PLÍHAL, David ŠMAJS, Lukáš SPÍCHAL and Jan HEJÁTKO. Identification of AHK2- and AHK3-like cytokinin receptors in Brassica napus reveals two subfamilies of AHK2 orthologues. Journal of Experimental Botany. Oxford: OXFORD UNIV PRESS, 2015, vol. 66, No 1, p. 339-353. ISSN 0022-0957. Available from: https://dx.doi.org/10.1093/jxb/eru422.
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GRILLOVÁ, Linda, Radim STRNADEL and David ŠMAJS. Isolation and amplification of treponemal DNA directly from the patient sample for whole genome sequencing. In World STI congress. Brisbane, Austrálie, 2015.
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ŠMAJS, David, Lenka PAŠTĚKOVÁ and Linda GRILLOVÁ. Macrolide Resistance in the Syphilis Spirochete, Treponema pallidum ssp. pallidum: Can We Also Expect Macrolide-Resistant Yaws Strains? American Journal of Tropical Medicine and Hygiene. McLean: American Society of Tropical Medicine and Hygiene, 2015, vol. 93, No 4, p. 678-683. ISSN 0002-9637. Available from: https://dx.doi.org/10.4269/ajtmh.15-0316.
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GRILLOVÁ, Linda and David ŠMAJS. Příprava treponemální DNA izolované přímo z klinického materiálu pro celogenomové sekvenování. In 59. studentská vědecká konference LF MU v Brně. 2015.
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GRILLOVÁ, Linda, Lenka MIKALOVÁ, H. ZAKOUCKÁ, J. ŽIDLICKÁ and David ŠMAJS. Rezistence původce syfilis, Treponema pallidum subsp. pallidum, k makrolidovým antibiotikům v České republice a ve světě (Macrolide resistance in Treponema pallidum subsp pallidum in the Czech Republic and in other countries). Epidemiologie, mikrobiologie, imunologie. Praha: Česká lékařská společnost Jana Evangelisty Purkyně, 2015, vol. 64, No 1, p. 4-10. ISSN 1210-7913.
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FIEDOROVÁ, Kristýna, Lenka DAVIDOVÁ GERŽOVÁ, Tereza KUBASOVÁ, Hana OBRUČOVÁ, David ŠMAJS, Jiří LITZMAN and Tomáš FREIBERGER. Studium střevního mikrobiomu u pacientů s běžným variabilním imunodeficitem (CVID). In Kongres klinické mikrobiologie, infekčních nemocí a epidemiologie. 2015.
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GRILLOVÁ, Linda, Michal STROUHAL, Lenka MIKALOVÁ and David ŠMAJS. The 2 simultaneously Published "k" Sequence Variants of tp0548 Locus of Treponema pallidum ssp. pallidum Isolates Differ: The One Published Later Has to Be Renamed as "l". Sexually Transmitted Diseases. PHILADELPHIA: LIPPINCOTT WILLIAMS & WILKINS, 2015, vol. 42, No 1, p. 53. ISSN 0148-5717. Available from: https://dx.doi.org/10.1097/OLQ.0000000000000220.
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ŠMAJS, David and Michal STROUHAL. Uncultivable Pathogenic Treponemes. In Yi-Wei Tang, Max Sussman, Dongyou Liu, Ian Poxton, Joseph Schwartzman. Molecular Medical Microbiology. Vol. 3. 2nd ed. Amsterdam: Elsevier Science Ltd., 2015, p. 1421-1436. ISBN 978-0-12-397169-2. Available from: https://dx.doi.org/10.1016/B978-0-12-397169-2.00079-2.
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GRILLOVÁ, Linda, Michal STROUHAL, Darina ČEJKOVÁ, Helena PĚTROŠOVÁ, Nathasa AURORA, Kay NIESELT and David ŠMAJS. Analysis of the first draft genome sequence of Treponema pallidum subsp. pallidum isolated directly from the human clinical sample. In Setkání biochemiků a molekulárních biologů. 2014, p. 34.
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OLEJNÍČKOVÁ, Kateřina, Ivo SEDLÁČEK and David ŠMAJS. Antarctic pseudomonads as a source of new antimicrobials. In XVI. Setkání biochemiků a molekulárních biologů. 2014.
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OLEJNÍČKOVÁ, Kateřina, Ivo SEDLÁČEK and David ŠMAJS. Antarktické bakterie jako zdroj nových antimikrobiálních látek. In Čo nového v mikrobiológii, Konferencia Mladých mikrobiológov. Štrbské pleso, 2014.
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OLEJNÍČKOVÁ, Kateřina, Eva CHALOUPKOVÁ and David ŠMAJS. Antibakteriální látky produkováné bakterií Pragia fontium 24613. In Tomáškovy dny. 2014.
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MICENKOVÁ, Lenka, Barbora ŠTAUDOVÁ, Juraj BOSÁK, Lenka MIKALOVÁ, Simona LITTNEROVÁ, Martin VRBA, Alena ŠEVČÍKOVÁ, Vladana WOZNICOVÁ and David ŠMAJS. Bacteriocin-encoding genes and ExPEC virulence determinants are associated in human fecal Escherichia coli strains. BMC Microbiology. LONDON: BioMed Central, 2014, vol. 14, No 109, p. 1-9. ISSN 1471-2180. Available from: https://dx.doi.org/10.1186/1471-2180-14-109.
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MICENKOVÁ, Lenka and David ŠMAJS. Bakteriocinogénia ako virulentný faktor kmeňov E. coli. In In Konferencia mladých mikrobiológov. Čo nového v mikrobiológii. ČSSM. 2014.
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KOHOUTOVA, Darina, David ŠMAJS, Paula MORAVKOVA, Jiri CYRANY, Monika MORAVKOVA, Miroslava FORSTLOVA, Michal CIHAK, Stanislav REJCHRT and Jan BURES. Escherichia coli strains of phylogenetic group B2 and D and bacteriocin production are associated with advanced colorectal neoplasia. BMC Infectious Diseases. London: BioMed Central, 2014, vol. 14, No 733, p. 1-8. ISSN 1471-2334. Available from: https://dx.doi.org/10.1186/s12879-014-0733-7.
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MICENKOVÁ, Lenka, Petra ŠIŠKOVÁ, Juraj BOSÁK, Ivana JAMBOROVÁ, Lenka ČERNOHORSKÁ and David ŠMAJS. Characterization of Human Uropathogenic ESBL-Producing Escherichia coli in the Czech Republic: Spread of CTX-M-27-Producing Strains in a University Hospital. Microbial Drug Resistance. New Rochelle: Mary Ann Liebert Inc., 2014, vol. 20, No 6, p. 610-617. ISSN 1076-6294. Available from: https://dx.doi.org/10.1089/mdr.2014.0013.
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MICENKOVÁ, Lenka and David ŠMAJS. Characterization of human uropathogenic ESBL-producing Escherichia coli: spread of CTX-M-27-producing B2-O25b-ST131 strains in Brno, Czech Republic. In In 24rd European Congress of Clinical Microbiology and Infectious Diseases, Barcelona. 2014. 2014.
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OLEJNÍČKOVÁ, Kateřina, Eva CHALOUPKOVÁ and David ŠMAJS. Identification of gene cluster responsible for production of antimicrobial agents in Pragia fontium. In 24th European Congress of Clinical Microbiology and Infectious Diseases, Barcelona. 2014.
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OLEJNÍČKOVÁ, Kateřina, Eva CHALOUPKOVÁ and David ŠMAJS. Identifikace genů zodpovědných za produkci antibakteriálních látek u Pragia fontium pomocí náhodné mutageneze. In Studentská vědecká konference. 2014.
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MIKALOVÁ, Lenka, Linda GRILLOVÁ, L GALLO VAULET, Petra POSPÍŠILOVÁ, Vladana WOZNICOVÁ, Ivana KUKLOVÁ, Hana ZÁKOUCKÁ, Maria Lucia PANDO and David ŠMAJS. Molecular characterization of syphilis treponemes in the Czech Republic and Argentina: several new genotypes were identified among isolates collected in 2013. In Gordon Research Conference. 2014.
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GRILLOVÁ, Linda, Lenka PAŠTĚKOVÁ, Helena PĚTROŠOVÁ, Magdalena FLASAROVÁ and David ŠMAJS. Molecular typing of syphilis: dynamic spectrum of genotypes and increasing rate of macrolide resistant isolates in the Czech Republic during last decade. Thailand, Bangkok: 12th International Conference on Molecular Epidemiology and Evolutionary Genetics of Infectious Diseases, 2014, 3 pp.
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GRILLOVÁ, Linda, Helena PĚTROŠOVÁ, Lenka MIKALOVÁ, Radim STRNADEL, Eliška DASTYCHOVÁ, Ivana KUKLOVÁ, Martina KOJANOVÁ, Miluše KREIDLOVÁ, Daniela VAŇOUSOVÁ, Jana HERCOGOVÁ, Přemysl PROCHÁZKA, Hana ZÁKOUCKÁ, Alena KRCHŇÁKOVÁ, Vladimír VAŠKŮ and David ŠMAJS. Molecular Typing of Treponema pallidum in the Czech Republic during 2011 to 2013: Increased Prevalence of Identified Genotypes and of Isolates with Macrolide Resistance. Journal of Clinical Microbiology. Washington: American Society for Microbiology, 2014, vol. 52, No 10, p. 3693-3700. ISSN 0095-1137. Available from: https://dx.doi.org/10.1128/JCM.01292-14.
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GRILLOVÁ, Linda, Helena PĚTROŠOVÁ, Lenka MIKALOVÁ and David ŠMAJS. Molekulární typizace kmenů Treponema pallidum subsp. pallidum v České republice. In SVK. 2014.
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GRILLOVÁ, Linda, Helena PĚTROŠOVÁ, Lenka MIKALOVÁ and David ŠMAJS. Molekulární typizace syfilitických kmenů v České republice v letech 2011-2013. In Tomáškovy dny. 2014.
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STROUHAL, Michal, Darina ČEJKOVÁ, Helena PĚTROŠOVÁ, Linda GRILLOVÁ and David ŠMAJS. PRELIMINARY RESULTS FROM A DRAFT GENOME SEQUENCE OF THE TREPONEMAL CLINICAL ISOLATE 120zC (C27). In Gordon Research Conference. 2014.
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MICENKOVÁ, Lenka and David ŠMAJS. Produkcia bakteriocínov ako virulentný faktor kmeňov Escherichia coli. In In Tomáškovy dny 2014. XXIII. Konference mladých mikrobiologů. 2014.
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GRILLOVÁ, Linda, Helena PĚTROŠOVÁ and David ŠMAJS. Sequencing-based molecular typing of Treponema pallidum strains in the Czech Republic during years 2012-2013. In ECCMID. 2014.
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NECHVÁTAL, Lukáš, Helena PĚTROŠOVÁ, Linda GRILLOVÁ, Petra POSPÍŠILOVÁ, Lenka MIKALOVÁ, Radim STRNADEL, Ivana KUKLOVÁ, Martina KOJANOVÁ, Miluše KREIDLOVÁ, Daniela VAŇOUSOVÁ, Přemysl PROCHÁZKA, Hana ZÁKOUCKÁ, Alena KRCHŇÁKOVÁ and David ŠMAJS. Syphilis-causing strains belong to separate SS14-like or Nichols-like groups as defined by multilocus analysis of 19 Treponema pallidum strains. International Journal of Medical Microbiology. JENA: Urban & Fischer Verlag, 2014, vol. 304, 5-6, p. 645-653. ISSN 1438-4221. Available from: https://dx.doi.org/10.1016/j.ijmm.2014.04.007.
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MIKALOVÁ, Lenka, Michal STROUHAL, Linda GRILLOVÁ and David ŠMAJS. The Molecular Typing Data of Recently Identified Subtype 11q/j of Treponema pallidum subsp. pallidum Suggest Imported Case of Yaws. (The molecular typing data of recently identified subtype 11q/j of treponema pallidum subsp. pallidum suggest imported case of yaws). Sexually transmitted diseases. Philadelphia: Lippincott Williams & Wilkins, 2014, vol. 41, No 9, p. 552-553. ISSN 0148-5717.
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MICENKOVÁ, Lenka and David ŠMAJS. Význam bakteriocinogénie vo virulencii kmeňov Escherichia coli. In In 58. Studentská vědecká konference LF MU. 2014.
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ŠTAUDOVÁ, Barbora, Michal STROUHAL, Marie ZOBANÍKOVÁ, Darina ČEJKOVÁ, Lucinda L. FULTON, Lei CHEN, lorenzo GIACANI, Arturo CENTURION-LARA, Sylvia M. BRUISTEN, Erica SODERGREN, George M. WEINSTOCK and David ŠMAJS. Whole Genome Sequence of the Treponema pallidum subsp. endemicum Strain Bosnia A: The Genome Is Related to Yaws Treponemes but Contains Few Loci Similar to Syphilis Treponemes. PLoS neglected tropical diseases. San Francisco: Public Library of Science, 2014, vol. 8, No 11, p. "e3261", 13 pp. ISSN 1935-2735. Available from: https://dx.doi.org/10.1371/journal.pntd.0003261.
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MITJÀ, Oriol, David ŠMAJS and Quique BASSAT. Advances in the Diagnosis of Endemic Treponematoses: Yaws, Bejel, and Pinta. PLoS Neglected Tropical Diseases. San Francisco: Public Library of Science, 2013, vol. 7, No 10, p. e2283, 9 pp. ISSN 1935-2735. Available from: https://dx.doi.org/10.1371/journal.pntd.0002283.
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BOSÁK, Juraj and David ŠMAJS. Bakteriociny čeledě Enterobacteriaceae: probiotický potenciál kolicinu FY. In Seminář Ústavu lékařské mikrobiologie 2. LF UK a FN v Motole. 2013.
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OLEJNÍČKOVÁ, Kateřina, Eva CHALOUPKOVÁ and David ŠMAJS. Celogenomová sekvence bakterie Pragia fontium 26413. In Čo nového v mikrobiológii, Konferencia Mladých mikrobiológov, Jasná. 2013. ISBN 978-80-971422-0-9.
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BOSÁK, Juraj, Lenka MICENKOVÁ and David ŠMAJS. Colicin FY inhibits a broad spectrum of Y. enterocolitica isolates. In BioMicroWorld 2013 - V International Conference of Environmental, Industrial and Applied Microbiology. 2013.
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MIKALOVÁ, Lenka, Petra POSPÍŠILOVÁ, Vladana WOZNICOVÁ, Ivana KUKLOVA, Hana ZAKOUCKA and David ŠMAJS. Comparison of CDC and sequence-based molecular typing of syphilis treponemes: tpr and arp loci are variable in multiple samples from the same patient. BMC Microbiology. LONDON: BioMed Central, 2013, vol. 13, No 178, p. 1-8. ISSN 1471-2180. Available from: https://dx.doi.org/10.1186/1471-2180-13-178.
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ŠTAUDOVÁ, Barbora, Lenka MICENKOVÁ, Juraj BOSÁK, Martin VRBA, Alena ŠEVČÍKOVÁ, Darina KOHOUTOVÁ, Vladana WOZNICOVÁ, Jan BUREŠ and David ŠMAJS. Escherichia coli strains encoding type 1 fimbriae are more often bacteriocin producers. In BioMicroWorld. 2013.
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OLEJNÍČKOVÁ, Kateřina, Eva CHALOUPKOVÁ, Juraj BOSÁK and David ŠMAJS. Identification of genes encoding phage tail-like bacteriocins in Pragia fontium. In 5th Congress of European Microbiologists (FEMS), book of abstracts. 2013.
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LUMEIJ, Johannes T., Lenka MIKALOVÁ and David ŠMAJS. Is there a difference between hare syphilis and rabbit syphilis? Cross infection experiments between rabbits and hares. Veterinary Microbiology. Amserdam: Elsevier, 2013, vol. 164, 1-2, p. 190-194. ISSN 0378-1135. Available from: https://dx.doi.org/10.1016/j.vetmic.2013.02.001.
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SEDLÁČEK, Ivo, Linda GRILLOVÁ, Eva STAŇKOVÁ, Jitka ČERNOHLÁVKOVÁ and David ŠMAJS. Isolation of human pathogen Escherichia albertii from faeces of seals (Leptonychos weddelli) in James Ross Island, Antarctica. Czech polar Reports. 2013, vol. 3, No 2, p. 173-183. ISSN 1805-0689.
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BOSÁK, Juraj and David ŠMAJS. Kolicin FY inhibuje růst kmenů Yersinia enterocolitica. In 26. kongres Československé společnosti mikrobiologické. 2013. ISBN 978-80-260-4507-6.
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MICENKOVÁ, Lenka and David ŠMAJS. Novel antibacterial substance produced by Escherichia coli O104:H4. In 23rd European Congress of Clinical Microbiology and Infectious Diseases, Berlin. 2013.
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MICENKOVÁ, Lenka and David ŠMAJS. Nový typ antibakteriálnej substancie produkovaný E. coli O104:H4. In Konferencia mladých mikrobiológov. Čo nového v mikrobiológii. ČSSM. 2013.
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MICENKOVÁ, Lenka and David ŠMAJS. Nový typ antibakteriálnej substancie produkovaný E. coli O104:H4. In 26. Kongres Československé společnosti mikrobiologické, Brno. 2013.
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BOSÁK, Juraj. Produkce kolicinu FY – nová vlastnost probiotických kmenů? In 57. Studentská vědecká konference. 2013.
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PĚTROŠOVÁ, Helena, Petra POSPÍŠILOVÁ, Michal STROUHAL, Darina ČEJKOVÁ, Marie ZOBANÍKOVÁ, Lenka MIKALOVÁ, Erica SODERGREN, George M. WEINSTOCK and David ŠMAJS. Resequencing of Treponema pallidum ssp. pallidum Strains Nichols and SS14: Correction of Sequencing Errors Resulted in Increased Separation of Syphilis Treponeme Subclusters. PloS ONE. San Francisco: Public Library of Science, 2013, vol. 8, No 9, p. e74319, 8 pp. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0074319.
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GRILLOVÁ, Linda and David ŠMAJS. Sekvenční analýza genomů Treponema pallidum subsp. pallidum izolovaných z klinického materiálnu. In Čo nového v mikrobiológii. 2013.
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ČEJKOVÁ, Darina, Marie ZOBANÍKOVÁ, Petra POSPÍŠILOVÁ, Michal STROUHAL, Lenka MIKALOVÁ, George M. WEINSTOCK and David ŠMAJS. Structure of rrn operons in pathogenic noncultivable treponemes: sequence but not genomic position of intergenic spacers correlates with classification of Treponema pallidum and Treponema paraluiscuniculi strains. Journal of Medical Microbiology. Reading: Society for General Microbiology, 2013, vol. 62, No 2, p. 196-207. ISSN 0022-2615. Available from: https://dx.doi.org/10.1099/jmm.0.050658-0.
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KOHOUTOVÁ, Darina, Stanislav REJCHRT, Marcela DRAHOŠOVÁ, Miroslav FÖRSTL, Monika MORÁVKOVÁ, David ŠMAJS, Marcela KOPÁČOVÁ, Jiří CYRANY, Michal ČIHÁK and Jan BUREŠ. Střevní mikrobiota u idiopatických střevních zánětu a kolorektálních neoplazií (Colonic microbiota in inflammatory bowel diseases and colorectal cancer). 1. vyd. Praha: Nucleus HK, 2013, 126 pp. Edice vědeckých monografií. ISBN 978-80-87009-97-0.
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BOSÁK, Juraj and David ŠMAJS. Účinek kolicinu FY na kmeny Yersinia enterocolitica. In Čo nového v mikrobiologii? Konferencia mladých mikrobiológov. 2013. ISBN 978-80-971422-0-9.
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BOSÁK, Juraj, Lenka MICENKOVÁ, Martin VRBA, Alena ŠEVČÍKOVÁ, Daniela DĚDIČOVÁ, Debora GARZETTI and David ŠMAJS. Unique Activity Spectrum of Colicin FY: All 110 Characterized Yersinia enterocolitica Isolates Were Colicin FY Susceptible. Plos One. PUBLIC LIBRARY SCIENCE: SAN FRANCISCO, 2013, vol. 8, No 12, p. e81829, 7 pp. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0081829.
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MICENKOVÁ, Lenka and David ŠMAJS. Význam bakteriocinogénie v patogenite Escherichia coli. In 57. Studentská vědecká konference LF MU. 2013.
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ZOBANÍKOVÁ, Marie, Michal STROUHAL, Lenka MIKALOVÁ, Darina ČEJKOVÁ, Lenka AMBROŽOVÁ, Petra POSPÍŠILOVÁ, Lucinda L. FULTON, Lei CHEN, Erica SODERGREN, George M. WEINSTOCK and David ŠMAJS. Whole Genome Sequence of the Treponema Fribourg-Blanc: Unspecified Simian Isolate Is Highly Similar to the Yaws Subspecies. PLOS Neglected Tropical Diseases. SAN FRANCISCO: PUBLIC LIBRARY SCIENCE, 2013, vol. 7, No 4, p. 1-8. ISSN 1935-2735. Available from: https://dx.doi.org/10.1371/journal.pntd.0002172.
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BOSÁK, Juraj and David ŠMAJS. Bakteriociny čeledi Enterobacteriaceae účinkující na patogenní bakterie. In Aktuality v mikrobiologii. 2012.
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ŠTAUDOVÁ, Barbora, Michal STROUHAL, Marie ZOBANÍKOVÁ, Helena PĚTROŠOVÁ and David ŠMAJS. Celogenomová sekvence T. pallidum subsp. endemicum kmene Bosnia A (Whole genom sequence of T. pallidum subsp. endemicum strain Bosnia A). In XXI. konference mladých mikrobiologů Tomáškovy dny 2012. 2012. ISBN 978-80-210-5874-3.
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BOSÁK, Juraj, Petra LAIBLOVÁ, Daniela DĚDIČOVÁ, Jan ŠMARDA and David ŠMAJS. Colicin FY – a bacteriocin specifically killing pathogenic strains of Y. enterocolitica. In 22nd European Congress of Clinical Microbiology and Infectious Diseases. 2012.
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ZOBANÍKOVÁ, Marie, Pavol MIKOLKA, Darina ČEJKOVÁ, Petra POSPÍŠILOVÁ, Lei CHEN, Michal STROUHAL, Xiang QIN, George M. WEINSTOCK and David ŠMAJS. Complete genome sequence of Treponema pallidum strain DAL-1. Standards in Genomic Sciences. 2012, vol. 7, No 1, p. "nestrankovano", 13 pp. ISSN 1944-3277. Available from: https://dx.doi.org/10.4056/sigs.2615838.
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MICENKOVÁ, Lenka and David ŠMAJS. Diverzita kmeňov Escherichia coli izolovaných od pacientov s ochoreniami gastrointestinálneho traktu. In 56. Studentská vědecká konference LF MU. 2012.
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ŠMAJS, David, Jan BUREŠ, Jan ŠMARDA, Eva CHALOUPKOVÁ, Jaroslav KVĚTINA, Miroslav FÖRSTL, Darina KOHOUTOVÁ, Martin KUNEŠ, Stanislav REJCHRT, Jiřina LESNÁ and Marcela KOPÁČOVÁ. Experimental Administration of the Probiotic Escherichia coli Strain Nissle 1917 Results in Decreased Diversity of E. coli Strains in Pigs. Current Microbiology. 2012, vol. 64, No 3, p. 205-210. ISSN 0343-8651. Available from: https://dx.doi.org/10.1007/s00284-011-0051-x.
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ŠMAJS, David, Steven J. NORRIS and George M. WEINSTOCK. Genetic diversity in Treponema pallidum: Implications for pathogenesis, evolution and molecular diagnostics of syphilis and yaws. Infection, Genetics and Evolution. AMSTERDAM: ELSEVIER SCIENCE BV, 2012, vol. 12, No 2, p. 191-202. ISSN 1567-1348. Available from: https://dx.doi.org/10.1016/j.meegid.2011.12.001.
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ŠMAJS, David, Darina ČEJKOVÁ, Lenka MICENKOVÁ, Claudia I. LIMA-BITTENCOURT, Edmar CHARTONE-SOUZA, Jan ŠMARDA and Andréa M. A. NASCIMENTO. Human Escherichia coli strains of different geographical and time source: bacteriocin types and their gene sequences are population-specific. ENVIRONMENTAL MICROBIOLOGY REPORTS. 2012, vol. 4, No 4, p. 459-466. ISSN 1758-2229. Available from: https://dx.doi.org/10.1111/j.1758-2229.2012.00365.x.
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KUDEROVÁ, Alena, Katarína KURICOVÁ, Eliška NEJEDLÁ, Anna ČURDOVÁ, Lenka MICENKOVÁ, David ŠMAJS and Jan HEJÁTKO. Identification of cytokinin receptors of Brassica napus. In Functional Genomics and Proteomics for Sustainable Agriculture book of abstracts, a conference commemorating the 190th birth anniversary of Gregor Mendel, Brno, 13th-14th June 2012. 2012. ISBN 978-80-7375-624-6.
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MIKALOVÁ, Lenka, Petra POSPÍŠILOVÁ, Magdalena FLASAROVÁ and David ŠMAJS. Molekulární detekce syfilis, kmenová typizace a stanovení makrolidové rezistence u původce syfilis - Treponema pallidum ssp. pallidum v klinickém materiálu. In Rutinní analýza nukleových kyselin molekulárně biologickými technikami (RANK 2011). 2012.
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MICENKOVÁ, Lenka and David ŠMAJS. New antibacterial substance produced by Escherichia coli O104:H4. In How bugs kill bugs: progress and challenges in bacteriocin research. Biochemical Society. 2012.
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DOLEJŠOVÁ, Tereza, Radovan FIŠER, Juraj BOSÁK, David ŠMAJS and Ivo KONOPÁSEK. Newly Described Colicin FY from Yersinia frederiksenii Forms Cation Selective Voltage-activated Pores. In The 2nd Prato Conference on Pore Forming Proteins. 2012.
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BOSÁK, Juraj, Petra LAIBLOVA, Jan ŠMARDA, Daniela DĚDIČOVÁ and David ŠMAJS. Novel Colicin F-Y of Yersinia frederiksenii Inhibits Pathogenic Yersinia Strains via YiuR-Mediated Reception, TonB Import, and Cell Membrane Pore Formation. Journal of Bacteriology. WASHINGTON: AMER SOC MICROBIOLOGY, 2012, vol. 194, No 8, p. 1950-1959. ISSN 0021-9193. Available from: https://dx.doi.org/10.1128/JB.05885-11.
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BOSÁK, Juraj, Radovan FIŠER, Ivo KONOPÁSEK and David ŠMAJS. Novel pore-forming colicin FY identified in the genus Yersinia. In How bugs kill bugs: progress and challenges in bacteriocin research. 2012.
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FLASAROVÁ, Magdalena, Petra POSPÍŠILOVÁ, Lenka MIKALOVÁ, Zuzana VALIŠOVÁ, Eliška DASTYCHOVÁ, Radim STRNADEL, Ivana KUKLOVÁ, Vladana WOZNICOVÁ, Hana ZÁKOUCKÁ and David ŠMAJS. Sequencing-based Molecular Typing of Treponema pallidum Strains in the Czech Republic: All Identified Genotypes are Related to the Sequence of the SS14 Strain. Acta Dermato-Venereologica. 2012, vol. 92, No 6, p. 669–674. ISSN 0001-5555. Available from: https://dx.doi.org/10.2340/00015555-1335.
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PĚTROŠOVÁ, Helena, Marie ZOBANÍKOVÁ, Darina ČEJKOVÁ, Lenka MIKALOVÁ, Petra POSPÍŠILOVÁ, Michal STROUHAL, Lei CHEN, Xiang QIN, Donna M. MUZNY, George M. WEINSTOCK and David ŠMAJS. Whole Genome Sequence of Treponema pallidum ssp. pallidum, Strain Mexico A, Suggests Recombination between Yaws and Syphilis Strains. PLOS Neglected Tropical Diseases. 2012, vol. 6, No 9, p. "nestrankovano", 10 pp. ISSN 1935-2735. Available from: https://dx.doi.org/10.1371/journal.pntd.0001832.
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ČEJKOVÁ, Darina, Marie ZOBANÍKOVÁ, Lei CHEN, Petra POSPÍŠILOVÁ, Michal STROUHAL, Xiang QIN, Lenka MIKALOVÁ, Stephen J. NORRIS, Donna M. MUZNY, Richard A. GIBBS, Lucinda L. FULTON, Erica SODERGREN, George M. WEINSTOCK and David ŠMAJS. Whole Genome Sequences of Three Treponema pallidum ssp. pertenue Strains: Yaws and Syphilis Treponemes Differ in Less than 0.2% of the Genome Sequence. PLoS Neglected Tropical Diseases. San Francisco: Public Library of Science, 2012, vol. 6, No 1, p. "nestrankovano", 14 pp. ISSN 1935-2727. Available from: https://dx.doi.org/10.1371/journal.pntd.0001471.
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MICENKOVÁ, Lenka and David ŠMAJS. Zmeny v genetickej výbave kmeňov E. coli izolovaných od pacientov s diagnostikovaným ochorením tráviacej sústavy. In Odborný seminár pre mladých mikrobiológov ČSSM. 2012.
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ŠMAJS, David, Barbora ŠTAUDOVÁ, Lenka MICENKOVÁ, Jan ŠMARDA, Martin VRBA, Alena ŠEVČÍKOVÁ, Zuzana VALIŠOVÁ and Vladana WOZNICOVÁ. Bacteriocin genes among E. coli strains: the incidence depends on genotype and phenotype of E. coli strains. In Acta Microbiologica et Immunologica Hungarica, vol. 58, Supplement : 16th International Congress of the Hungarian Society for Microbiology. 2011. ISSN 1217-8950.
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ŠMAJS, David, Lenka MICENKOVÁ, Jan ŠMARDA, M VRBA, A. ŠEVČÍKOVÁ, Z. VALIŠOVÁ and Vladana WOZNICOVÁ. Bacteriocinogeny in E. coli phylogroups: commensal E. coli strains produce more often colicins whereas pathogenic strains microcins. In . International Union of Microbiological Societies 2011 Congress. 2011.
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BUREŠ, Jan, David ŠMAJS, Jaroslav KVĚTINA, Miroslav FŐRSTL, Jan ŠMARDA, Darina KOHOUTOVÁ, Martin KUNEŠ, Jiří CYRANY, Ilja TACHECÍ, Stanislav REJCHRT, Jiřina LESNÁ, Viktor VOŘÍŠEK and Marcela KOPÁČOVÁ. Bacteriocinogeny in experimental pigs treated with short-term high-dose indomethacin with or without probiotic bacteria Escherichia coli Nissle 1917. Wourld Journal of Gastroenterology. China, 2011, vol. 17, No 5, p. 609-617. ISSN 1007-9327. Available from: https://dx.doi.org/10.3748/wjg.v17.i5.609.
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PĚTROŠOVÁ, Helena, Petra POSPÍŠILOVÁ, Marie ZOBANÍKOVÁ, Lenka MIKALOVÁ and David ŠMAJS. Celogenomová sekvence Treponema pallidum ssp. pallidum kmene Mexico A: Důkaz horizontálního přenosu genů u treponemat? In Genetická konference, Lednice, 14.-16.9.2011. 2011.
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BOSÁK, Juraj, Petra KOTRSALOVÁ, Jan ŠMARDA and David ŠMAJS. Colicin FY – a novel bacteriocin of Yersinia frederiksenii. In 15th European Workshop on Bacterial Protein Toxins, Oslo. 2011.
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ŠMAJS, David, Marie ZOBANÍKOVÁ, Michal STROUHAL, Darina ČEJKOVÁ, Shannon DUGAN-ROCHA, Petra POSPÍŠILOVÁ, Steven J. NORRIS, Tom ALBERT, Xiang QIN, Kym HALLSWORTH-PEPIN, Christian BUHAY, Donna M. MUZNY, Lei CHEN, Richard A. GIBBS and George M. WEINSTOCK. Complete Genome Sequence of Treponema paraluiscuniculi, Strain Cuniculi A: The Loss of Infectivity to Humans Is Associated with Genome Decay. Plos One. 2011, vol. 6, No 5, p. "nestrankovano", 10 pp. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0020415.
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MUSILOVÁ, Jana, David ŠMAJS, Anna RAUTANNEN and Tara MILLS. Genetická náchylnost člověka k infekčním chorobám. In Genetická konference, Lednice, 14.-16.9.2011. 2011.
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POSPÍŠILOVÁ, Petra and David ŠMAJS. Genetické studie původce syfilis a jejich význam v objasnění virulence a evoluce treponem. In Seminář "Aktuality v mikrobiologii“ Společností pro epidemiologii a mikrobiologii (SEM) ČLS JEP ve spolupráci s Československou společností mikrobiologickou (ČSSM). 2011.
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ZOBANÍKOVÁ, Marie, Darina ČEJKOVÁ, Michal STROUHAL, Petra POSPÍŠILOVÁ, George M. WEINSTOCK and David ŠMAJS. Genome differences between Treponema pallidum subsp. pallidum and Treponema pallidum subsp. pertenue. In 4th Congress of European Microbiologists FEMS 2011, Geneva, 26.6. – 30.6. 2011. 2011.
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MICENKOVÁ, Lenka and David ŠMAJS. Charakterizácia kmeňov Escherichia coli izolovaných od osôb s ochoreniami tráviaceho traktu. In 55. Studentská vědecká konference LF MU, Brno, 18. 5. 2011. 2011.
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MUSILOVÁ, Jana and David ŠMAJS. Identification of syphilis susceptibility locus - a pilot study. In XV. Setkání biochemiků a molekulárních biologů, Brno, 1.-2.11.2011. 2011.
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MICENKOVÁ, Lenka and David ŠMAJS. Identifikácia nových typov antibakteriálnych proteínov produkovaných baktériou Escherichia coli. In Genetická konference, Lednice, 14.-16.9.2011. 2011.
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PĚTROŠOVÁ, Helena, Petra POSPÍŠILOVÁ, Marie ZOBANÍKOVÁ, Lenka MIKALOVÁ and David ŠMAJS. Kompletní genomová sekvence Treponema pallidum subsp. pallidum kmene Mexico A. In Studentská vědecká konference. 2011. ISBN 978-80-210-5483-7.
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MIKALOVÁ, Lenka, Petra POSPÍŠILOVÁ, Magdalena FLASAROVÁ, Zuzana VALIŠOVÁ, Vladana WOZNICOVÁ, H. ZÁKOUCKÁ, I. KUKLOVÁ and David ŠMAJS. Molecular detection and typing of Treponema pallidum ssp. pallidum in clinical samples based on sequencing of TP0136, TP0548 and 23S rRNA genes. In Acta Microbiologica et Immunologica Hungarica, vol. 58, Supplement : 16th International Congress of the Hungarian Society for Microbiology. 2011. ISSN 1217-8950.
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MIKALOVÁ, Lenka, Petra POSPÍŠILOVÁ, Magdalena FLASAROVÁ, Zuzana VALIŠOVÁ, Vladana WOZNICOVÁ, Hana ZÁKOUCKÁ, L KUKLOVÁ and David ŠMAJS. Molecular detection and typing of Treponema pallidum ssp. pallidum in clinical samples based on sequencing of TP0136, TP0548 and 23S rRNA genes. 2011.
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MIKALOVÁ, Lenka, Petra POSPÍŠILOVÁ, Magdalena FLASAROVÁ, H ZÁKOUCKÁ, Vladana WOZNICOVÁ and David ŠMAJS. Molecular detection of Treponema pallidum ssp. pallidum in clinical samples: sequencing of TP0136, TP0548 and 23S rRNA genes. In International Union of Microbiological Societies 2011 Congress. 2011.
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MIKALOVÁ, Lenka, Petra POSPÍŠILOVÁ, Magdalena FLASAROVÁ and David ŠMAJS. Molekulární detekce, kmenová typizace a stanovení makrolidové rezistence původce syfilis – Treponema pallidum subsp. pallidum v klinickém materiálu. In Rutinní analýza nukleových kyselin molekulárně biologickými technikami RANK 2011. 2011.
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BOSÁK, Juraj, David ŠMAJS, Petra LAIBLOVÁ, Daniela DĚDIČOVÁ and Jan ŠMARDA. Nový kolicín rodu Yersinia. In Genetická konference, Lednice, 14.-.16.9.2011. 2011.
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ŠMAJS, David, Lenka MIKALOVÁ, Darina ČEJKOVÁ, Michal STROUHAL, Marie ZOBANÍKOVÁ, Petra POSPÍŠILOVÁ, Steven J. NORRIS and George M. WEINSTOCK. Whole Genome Analyses of Treponemes: New Targets for Strain- and Subspecies- Specific Molecular Diagnostics. In Syphilis - Recognition, Description and Diagnosis. Rijeka (Croatia): InTech, 2011, p. 19-34. Infectious Diseases. ISBN 978-953-307-554-9.
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PĚTROŠOVÁ, Helena, Petra POSPÍŠILOVÁ, Marie ZOBANÍKOVÁ, Lenka MIKALOVÁ and David ŠMAJS. Whole genome sequence of treponema pallidum subspecies pallidum strain Mexico A. In XV. Setkání biochemiků a molekulárních biologů, Brno, 1.-2.11.2011. 2011.
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PĚTROŠOVÁ, Helena, Petra POSPÍŠILOVÁ, Marie ZOBANÍKOVÁ, Lenka MIKALOVÁ and David ŠMAJS. Whole genome sequence of Treponema pallidum subspecies pallidum strain Mexico A. In XV. Setkání biochemiků a molekulárních biologů. 2011. ISBN 978-80-210-5594-0.
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ČEJKOVÁ, Darina, Marie ZOBANÍKOVÁ, Lei CHEN, Petra POSPÍŠILOVÁ, Michal STROUHAL, Xiang QIN, Lenka MIKALOVÁ, David ŠMAJS and George M. WEINSTOCK. Whole genome sequences of yaws spirochetes shed more light on Treponema pallidum genomics. In Cold Spring Harbor Laboratory. 2011.
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ŠMAJS, David, Lenka MICENKOVÁ, Jan ŠMARDA, M. VRBA, A. ŠEVČÍKOVÁ, Zuzana VALIŠOVÁ and Vladana WOZNICOVÁ. Bacteriocin synthesis in uropathogenic and commensal Escherichia coli: colicin E1 is a potential virulence factor. BMC Microbiology. BioMed Central, 2010, vol. 10, No 288, 10 pp. ISSN 1471-2180.
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MIKALOVÁ, Lenka, Michal STROUHAL, Darina ČEJKOVÁ, Marie ZOBANÍKOVÁ, Petra POSPÍŠILOVÁ, S. J. NORRIS, E. SODERGREN and G. M. WEINSTOCK. Celogenomové restrikční mapování u vybraných zástupců rodu Treponema. In 25. Kongres Československé společnosti mikrobiologické. 2010.
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MIKALOVÁ, Lenka and David ŠMAJS. Celogenomové restrikční mapování u 8 zástupců rodu Treponema. In XIX. Tomáškovy dny. 2010.
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WOZNICOVÁ, Vladana, David ŠMAJS, Petra POSPÍŠILOVÁ, Hana ZÁKOUCKÁ, Eliška DASTYCHOVÁ, Magdalena FLASAROVÁ and Zuzana VALIŠOVÁ. Clarithromycin treatment failure due to macrolide resistance in Treponema pallidum in a patient with primary syphilis. Acta Dermato-Venereologica. 2010, vol. 90, No 2, p. 206-207. ISSN 0001-5555.
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ŠMAJS, David, Michal STROUHAL, Marie ZOBANÍKOVÁ, Darina ČEJKOVÁ, S. DUGAN-ROCHA, Petra POSPÍŠILOVÁ, S.J. NORRIS, T. ALBERT, X. QUIN, K. HALLSWORTH-PEIN and G.M. WEINSTOCK. Complete genome sequence of T. paraluiscuniculi, strain Cuniculi A: an evidence for adaptation of T. paraluiscuniculi to rabbits. In Gordon Research Conference 2010. 2010.
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ŠMAJS, David, Lenka MICENKOVÁ, Jan ŠMARDA, M. VRBA and A. ŠEVČÍKOVÁ. Diverzita a frekvence výskytu bakteriocinů u lidských komensálních a patogenních kmenů E. coli. In 25. Kongres Československé společnosti mikrobiologické. 2010.
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MIKALOVÁ, Lenka, Michal STROUHAL, Darina ČEJKOVÁ, Marie ZOBANÍKOVÁ, Petra POSPÍŠILOVÁ, S.J. NORRIS, E. SODERGREN, G.M. WEINSTOCK and David ŠMAJS. Genome analysis of Treponema pallidum subsp. pallidum and subsp. pertenue strains by whole genome fingerprinting: most of the genetic differences are localized in six genomic regions. PloS ONE. San Francisco: Public Library of Science, 2010, vol. 5, No 12, p. e15713, 13 pp. ISSN 1932-6203.
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ŠIŠKOVÁ, Petra, Lenka ČERNOHORSKÁ, Zuzana VALIŠOVÁ, Vladana WOZNICOVÁ and David ŠMAJS. Charakterizace uropatogenních kmenů E. coli rezistentních k širokospektrým cefalosporinům (Characterisation of uropathogenic E. coli strains with the resistance to extended spectrum cephalosporins). In XVIII. MORAVSKO - SLOVENSKÉ MIKROBIOLOGICKÉ DNY. 2010. ISBN 978-80-254-8417-3.
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MIKALOVÁ, Lenka, Michal STROUHAL and David ŠMAJS. Identifikace genetických rozdílů mezi původci yaws a syfilis. In 54. Studentská vědecká konference LF MU. 2010.
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MICENKOVÁ, Lenka and David ŠMAJS. Identifikácia bakteriocínov u kmeňov Escherichia coli izolovaných z črevnej flóry pacientov s ochoreniami tráviaceho traktu. In 54. Studentská vědecká konference LF MU. 2010.
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MICENKOVÁ, Lenka and David ŠMAJS. Identifikácia bakteriocínov u kmeňov Escherichia coli izolovaných z črevnej flóry pacientov u infekčných a neinfekčných ochorení tráviaceho traktu. In XIX. Tomáškovy dny. 2010.
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BOSÁK, Juraj and David ŠMAJS. Identifikácia receptoru nového kolicínu FY. In 54. Studentská vědecká konference LF MU. 2010.
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ŠMAJS, David, Lenka MICENKOVÁ, Jan ŠMARDA, M. VRBA and A. ŠEVČÍKOVÁ. Incidence of bacteriocin types among human commensal and pathogenic E. coli strains. In XXXIII. International Congress on Microbial Ecology and Disease. 2010.
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POSPÍŠILOVÁ, Petra, Magdalena FLASAROVÁ, H. ZÁKOUCKÁ, Vladana WOZNICOVÁ, G.M. WEINSTOCK and David ŠMAJS. Molecular characterization of clinical isolates of Treponema pallidum subsp. pallidum in the Czech Republic. In Gordon Research Conference 2010. 2010.
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POSPÍŠILOVÁ, Petra and David ŠMAJS. Molekulární detekce syfilis: PCR diagnostika, typizace a detekce makrolidové rezistence u Treponema pallidum. (Molecular detection of syphilis treponeme: molecular typing and detection of macrolide resistance). In RUTINNÍ ANALÝZA NUKLEOVÝCH KYSELIN MOLEKULÁRNĚ BIOLOGICKÝMI TECHNIKAMI 2010. 2010.
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ŠTAUDOVÁ, Barbora and David ŠMAJS. Molekulární typizace bakteriocinů produkovaných bakteriálními kmeny izolovanými z klinického materiálu. In XIX. Tomáškovy dny. 2010.
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MIKOLKA, Pavol, Petra POSPÍŠILOVÁ and David ŠMAJS. Najvirulentnejší zástupca rodu Treponema - Treponema pallidum subsp. pallidum DAL-1 a jeho celogenómová sekvencia. In XIV. Setkání biochemiků a molekulárních biologů. 2010.
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MIKOLKA, Pavol, Petra POSPÍŠILOVÁ and David ŠMAJS. Najvirulentnější zástupca rodu Treponema - Treponema pallidum subsp. pallidum DAL-1 a jeho celogenómová sekvencia. (DAL-1, the most virulent strain Treponema pallidum subsp. pallidum and its whole genome sequence.). Praha: ČSSM, 2010, 4 pp. LI-3. ISSN 0009-0646.
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BOSÁK, Juraj, Petra KOTRSALOVÁ, D. DĚDIČOVÁ, Jan ŠMARDA and David ŠMAJS. Nový kolicín rodu Yersinia. In 25. Kongres Československé společnosti mikrobiologické. 2010.
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BOSÁK, Juraj and David ŠMAJS. Playing with OmpA: identification of colicin-recognizing epitope of OmpA receptor. In The student scientific conference of genetically modified organisms. 2010.
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ČEJKOVÁ, Darina and David ŠMAJS. Projekt lidského mikrobiomu. (Human microbiome project). Universitas - revue Masarykovy univerzity. Brno: Masarykova univerzita, 2010, vol. 43, No 2, p. 23-28. ISSN 1211-3387.
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ZOBANÍKOVÁ, Marie, Darina ČEJKOVÁ, Michal STROUHAL, Petra POSPÍŠILOVÁ, G.M. WEINSTOCK and David ŠMAJS. Srovnání genomů původců yaws a syfilis. In XIV. Setkání biochemiků a molekulárních biologů. 2010.
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ZOBANÍKOVÁ, Marie, Darina ČEJKOVÁ, Michal STROUHAL, Petra POSPÍŠILOVÁ, G.M. WEINSTOCK and David ŠMAJS. Treponema pallidum: celogenomové rozdíly mezi poddruhy pallidum a pertenue. In 25. Kongres Československé společnosti mikrobiologické. 2010.
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PĚTROŠOVÁ, Helena, Petra POSPÍŠILOVÁ, Lenka MIKALOVÁ and David ŠMAJS. Určení genomové sekvence Treponema pallidum subsp. pallidum kmene Mexico A pomocí metody Solexa. In Setkání biochemiků a molekulárních biologů. 2010.
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ŠTAUDOVÁ, Barbora and David ŠMAJS. Výskyt genů kódujících bakteriociny v kmenech E. coli izolovaných z klinického materiálu. In 54. Studentská vědecká konference LF MU. 2010.
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MIKALOVÁ, Lenka, Michal STROUHAL, Darina ČEJKOVÁ, Marie ZOBANÍKOVÁ, Petra POSPÍŠILOVÁ, S. J. NORRIS, E. SODERGREN, G. M.. WEINSTOCK and David ŠMAJS. Whole genome fingerprinting of 8 strains from the genus Treponema. In XXXIII. International Congress on Microbial Ecology and Disease. 2010.
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MIKALOVÁ, Lenka, Michal STROUHAL, Petra POSPÍŠILOVÁ, E. SODERGREN and David ŠMAJS. Whole genome fingerprinting of 8 strains from the genus Treponema. In The 7th International Medical Postgraduate Conference. 2010.
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BOSÁK, Juraj, Petra KOTRSALOVÁ and David ŠMAJS. Bakteriocín kmeňa Yersinia frederiksenii 27601 (Bacteriocin of strain Yersinia frederiksenii 27601). In XIII. Setkání biochemiků a molekulárních biologů. Sborník příspěvků. 1st ed. Brno: Masarykova univerzita, 2009, p. 4-5. ISBN 978-80-210-4830-0.
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MIKALOVÁ, Lenka and David ŠMAJS. Celogenomové restrikční mapování u zástupců rodu Treponema. (Whole genome fingerprinting in strains of genus Treponema.). 2009.
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ŠMAJS, David, Lenka MICENKOVÁ, Jan ŠMARDA, M. VRBA, A. ŠEVČÍKOVÁ, Zuzana VALIŠOVÁ and Vladana WOZNICOVÁ. Colicin E1 production is associated with bacteriocin multiproducer strains in uropathogenic Escherichia coli. In III. International Conference on Environmental, Industrial and Applied Microbiology (BioMicroWorld2009). 2009.
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ŠMAJS, David. členství v panelu P302 lékařských a biologických věd GAČR. GAČR, 2009.
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FLASAROVÁ, Magdalena, Petra MATĚJKOVÁ POSPÍŠILOVÁ, David ŠMAJS, Vladana WOZNICOVÁ and Zuzana VALIŠOVÁ. Detekce původce syfilis Treponema pallidum ssp. pallidum v klinickém materiálu pomocí nested PCR rekce. (Detection of Treponema pallidum ssp. pallidum in clinical specimens using nested PCR.). In Moravské Epidemiologické Dny. 2009.
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FLASAROVÁ, Magdalena, Petra MATĚJKOVÁ POSPÍŠILOVÁ, Zuzana VALIŠOVÁ, David ŠMAJS and Vladana WOZNICOVÁ. Detekce Treponema pallidum subsp. pallidum v klinickém materiálu. (Detection of Treponema pallidum subsp. pallidum in clinical stuff.). In Seminář Československé společnosti mikrobiologické. 2009.
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FLASAROVÁ, Magdalena, Petra MATĚJKOVÁ POSPÍŠILOVÁ, David ŠMAJS, Vladana WOZNICOVÁ and Zuzana VALIŠOVÁ. Diagnostika původce syfilis Treponema pallidum ssp. pallidum v klinickém materiálu pomocí nested PCR reakce. (Diagnostics of the causative agent of syphilis Treponema pallidum ssp. pallidum in clinical stuff with nested PCR.). In XVIII. Tomáškovy dny. 2009.
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ČERNOHORSKÁ, Lenka, Zuzana VALIŠOVÁ, Vladana WOZNICOVÁ and David ŠMAJS. Characterization of uropathogenic E. coli strains with reduced susceptibility or resistance to extended spectrum cephalosporines. In Control and Mangement of Pathogenic Escherichia coli. 2009.
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MIKALOVÁ, Lenka, Jan ŠMARDA and David ŠMAJS. Charakterizace bakteriofágů rodu Salmonella. (Characterization of phages of Salmonella genus.). In XVIII. Tomáškovy dny. 2009.
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BOSÁK, Juraj, Petra KOTRSALOVÁ, David ŠMAJS and Jan ŠMARDA. Kolicin FY - nový bakteriocín rodu Yersinia. (Colicin FY - new bacteriocin of Yersinia genus.). In XVIII. Tomáškovy dny. 2009.
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ZOBANÍKOVÁ, Marie, Petra MATĚJKOVÁ POSPÍŠILOVÁ, Michal STROUHAL, Darina ČEJKOVÁ, David ŠMAJS and George M. WEINSTOCK. Komparativní analýza genomů Treponema pallidum subspecies pertenue a Treponema pallidum subspecies pallidum. (Comparative genome analysis of Treponema pallidum subspecies pertenue and Treponema pallidum subspecies pallidum.). In XVIII. Tomáškovy dny. 2009.
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MATĚJKOVÁ POSPÍŠILOVÁ, Petra, Magdalena FLASAROVÁ, Hana ZÁKOUCKÁ, Milan BOŘEK, Soňa KŘEMENOVÁ, Petr ARENBERGER, Vladana WOZNICOVÁ, G.M. WEINSTOCK and David ŠMAJS. Macrolide treatment failure in a case of secondary syphilis: a novel A2059G mutation in the 23S rRNA gene of Treponema pallidum subsp. pallidum. Journal of Medical Microbiology. SOC GENERAL MICROBIOLOGY, 2009, vol. 58, No 6, p. 832–836. ISSN 0022-2615.
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MIKALOVÁ, Lenka, Michal STROUHAL, Petra MATĚJKOVÁ POSPÍŠILOVÁ, David ŠMAJS and G.M. WEINSTOCK. Mapování sekvenčních rozdílů u rodu Treponema. (Mapping of sequencing differences in Treponema genus.). In XIII. Setkání biochemiků a molekulárních biologů. 1st ed. Brno: Masarykova univerzita, 2009, p. 9-10. ISBN 978-80-210-4830-0.
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MICENKOVÁ, Lenka and David ŠMAJS. Molekulárna typizácia bakteriocínov v skupinách kmeňov Escherichia coli. (Molecular typing of bacteriocins in Escherichia coli strains.). In 53. Studentská vědecká konference. 2009.
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FLASAROVÁ, Magdalena, Petra POSPÍŠILOVÁ, David ŠMAJS, Vladana WOZNICOVÁ and Zuzana VALIŠOVÁ. Molekulárně biologická diagnostika původce syfilis Treponema pallidum subsp. pallidum v klinickém materiálu. (Molecular biology diagnostics of Treponema pallidum subsp. pallidum, the caustive agent of syphilis in clinical material). In XVII. Moravsko-slovenské mikrobiologické dny. 2009.
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MICENKOVÁ, Lenka and David ŠMAJS. Molekulárne typovanie bakteriocínov v skupinách kmeňov Escherichia coli. (Molecular typing of bacteriocins in groups of Escherichia coli strains.). In XIII.Setkání biochemiků a molekulárních biologů. Sborník příspěvků. 1st ed. Brno: Masarykova univerzita, 2009, p. 80. ISBN 978-80-210-4830-0.
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MATĚJKOVÁ POSPÍŠILOVÁ, Petra, Magdalena FLASAROVÁ, Hana ZÁKOUCKÁ, Vladana WOZNICOVÁ and David ŠMAJS. Molekulární detekce lokusu makrolidové rezistence u klinických izolátů syfilis v České republice. (Molecular detection of locus of macrolide resistance in syphilis clinical isolates from Czech Republic.). In XVIII. Tomáškovy dny. 2009.
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STROUHAL, Michal, Petra MATĚJKOVÁ POSPÍŠILOVÁ, Darina ČEJKOVÁ, Lenka AMBROŽOVÁ, David ŠMAJS and Weinstock GEORGE M. Nová strategie sekvencování celého genomu patogenních spirochet. (New strategy of whole genome sequencing of patogenic spirochets.). In XIII.Setkání biochemiků a molekulárních biologů. Sborník příspěvků. 1st ed. Brno: Masarykova univerzita, 2009, p. 14. ISBN 978-80-210-4830-0.
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BOSÁK, Juraj and David ŠMAJS. Nový bakteriocín rodu Yersinia. (New bacteriocin of Yersinia genus.). In 53. Studentská vědecká konference LF MU. 2009.
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VALIŠOVÁ, Zuzana, Vladana WOZNICOVÁ, Magdalena FLASAROVÁ, Petra MATĚJKOVÁ POSPÍŠILOVÁ and David ŠMAJS. Přínos PCR pro diagnostiku časné syfilidy. (Contribution of PCR for diagnosis of early syphilis.). In Seminář Československé společnosti mikrobiologické. 2009.
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WOZNICOVÁ, Vladana, David ŠMAJS, Petra MATĚJKOVÁ POSPÍŠILOVÁ, Magdalena FLASAROVÁ and Zuzana VALIŠOVÁ. Rezistence T. pallidum k makrolidům (diagnostika a kazustika). (Macrolide resistance in T. pallidum (diagnosis and case report).). In XII. Olomoucká dermatologická konference. 2009. ISSN 1802-2960.
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Screening of macrolide resistance locus in Treponema pallidum subsp. pallidum in the Czech Republic.MATĚJKOVÁ POSPÍŠILOVÁ, Petra, Magdalena FLASAROVÁ, Hana ZÁKOUCKÁ, M. BOŘEK, Gabriela KŘEMENOVÁ, P. ARENBERGER, Vladana WOZNICOVÁ, G. M. WEINSTOCK and David ŠMAJS. Screening of macrolide resistance locus in Treponema pallidum subsp. pallidum in the Czech Republic. In Clinical Microbiology and Infection, Abstracts of the 19th ECCMID, P698. Neuveden: European Society of Clinical Microbiology and Infectious Diseases, 2009, p. 168. ISSN 1198-743X.
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ZOBANÍKOVÁ, Marie, Darina ČEJKOVÁ, Michal STROUHAL, Petra MATĚJKOVÁ POSPÍŠILOVÁ, David ŠMAJS and Weinstock GEORGE M. Srovnání genomů původců yaws s genomem kmene Nichols, původcem syfilis. (Comparison of genomes of strains causing yaws with the genome of strain Nichols, the causative agent of syphilis.). In XIII. Setkání biochemiků a molekulárních biologů. Sborník příspěvků. 1st ed. Brno: Masarykova univerzita, 2009, p. 105. ISBN 978-80-210-4830-0.
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FLASAROVÁ, Magdalena, Petra POSPÍŠILOVÁ, David ŠMAJS, Vladana WOZNICOVÁ and Zuzana VALIŠOVÁ. Syfilis, diagnostika a kmenová typizace. (Syphilis, diagnostics and strain typing.). In 23. Pečenkovy epidemiologické dny. 2009.
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ŠMAJS, David, Michal STROUHAL, Marie ZOBANÍKOVÁ, Darina ČEJKOVÁ, Petra POSPÍŠILOVÁ MATĚJKOVÁ and George M. WEINSTOCK. The complete genome sequence of T. paraluiscuniculi strain Cuniculi A and its comparison with syphilis spirochete genome. In 3rd FEMS Congress of European Microbiologists. Abstract CD, 2132. 2009.
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MIKALOVÁ, Lenka, Michal STROUHAL, Petra MATĚJKOVÁ POSPÍŠILOVÁ, David ŠMAJS and George M. WEINSTOCK. Whole genome amplification and analysis: genome differences in the genus Treponema. In 3rd FEMS Congress of European Microbiologists. Abstract CD, 1749. 2009.
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ŠMAJS, David, Marie ZOBANÍKOVÁ, Darina ČEJKOVÁ, Petra MATĚJKOVÁ POSPÍŠILOVÁ, Michal STROUHAL and Weinstock GEORGE M. Whole genome sequencing of pathogenic and nonpathogenic treponemes: comparison of syphilis and yaws strains with T. paraluiscuniculi. In Clinical Microbiology and Infection, Volume 15, Issue s4, Abstracts of the 19th ECCMID, P1329. Neuveden: European Society of Clinical Microbiology and Infectious Diseases, 2009, p. 368. ISSN 1198-743X.
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BRINKMAN, Mary Beth, Melanie A. MCGILL, Jonas PETTERSSON, Arthur ROGERS, Petra MATĚJKOVÁ, David ŠMAJS, George M. WEINSTOCK, Steven J. NORRIS and Timothy PALZKILL. A novel Treponema pallidum antigen, TP0136, is an outer membrane protein that binds human fibronectin. INFECTION AND IMMUNITY. The American Society for Microbiology, 2008, vol. 76, No 5, p. 1848-1857. ISSN 0019-9567.
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ŠMAJS, David, Jan ŠMARDA, M. VRBA and A. ŠEVČÍKOVÁ. Bacteriocin types produced by Escherichia coli strains isolated from human and animal samples. In XIX. Biologické dny, sborník abstrakt. Hradec Králové: Tribun EU, 2008, p. 24. ISBN 978-80-7399-545-4.
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ZOBANÍKOVÁ, Marie, Petra MATĚJKOVÁ, Michal STROUHAL, Darina ČEJKOVÁ and David ŠMAJS. Celogenomové sekvenační metody: srovnání 3 metod při sekvenaci genomu Treponema pallidum subspecies pertenue Samoa D. (Whole genome sequencing methods: comparison of 3 methods used in the sequencing of Treponema pallidum subspecies pertenue Samoa D genome.). In Tomáškovy dny 2008, sborník abstraktů. 2008.
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MATĚJKOVÁ, Petra, Michal STROUHAL, David ŠMAJS, Steven J. NORRIS, Timothy PALZKILL, Joseph F. PETROSINO, Erica SODERGREN, Jason E. NORTON, Jaz SINGH, Todd A. RICHMOND, Michael N. MOLLA, Thomas J. ALBERT and George M. WEINSTOCK. Complete genome sequence of Treponema pallidum ssp. pallidum strain SS14 determined with oligonucleotide arrays. BMC Microbiology. BioMed Central, 2008, vol. 8, No 8, p. 76-87. ISSN 1471-2180.
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ŠMAJS, David, Michal STROUHAL, Petra MATĚJKOVÁ, Darina ČEJKOVÁ, Luciana CURSINO, Edmar CHARTONE-SOUZA, Jan ŠMARDA and Andrea M.A. NASCIMENTO. Complete sequence of low-copy-number plasmid MccC7-H22 of probiotic Escherichia coli H22 and the prevalence of mcc genes among human E. coli. Plasmid. Thomson Scientific, 2008, vol. 59, No 1, p. 1-10. ISSN 0147-619X.
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ŠMAJS, David. člen podoborové komise 310 GAČR. 2008.
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VALIŠOVÁ, Zuzana, Vladana WOZNICOVÁ, Magdalena FLASAROVÁ, Petra MATĚJKOVÁ and David ŠMAJS. Diagnostika časné syfilidy metodou PCR - přínos pro klinickou praxi. (PCR diagnostics of early syphilis - hands-on experience). In Celostátní sjezd mikrobiologie a epidemiologie, sborník abstrakt. 2008.
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VALIŠOVÁ, Zuzana, Vladana WOZNICOVÁ, Magdalena FLASAROVÁ, Petra MATĚJKOVÁ POSPÍŠILOVÁ and David ŠMAJS. Diagnostika časné syfilidy metodou PCR, přínos pro klinickou praxi. (PCR diagnosis of early syphilis, contribution to clinical routine.). In Celostátní sjezd mikrobiologie a epidemiologie. 2008.
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MIKALOVÁ, Lenka, Michal STROUHAL, Petra MATĚJKOVÁ and David ŠMAJS. Genome differences in the genus Treponema. In XIX. Biologické dny, sborník abstrakt. Hradec Králové: Tribun EU, 2008, p. 71. ISBN 978-80-7399-545-4.
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ŠMAJS, David, Magda DOLEŽALOVÁ, Pavel MACEK and Lukáš ŽÍDEK. Inactivation of colicin Y by intramembrane helix helix interaction with its immunity protein (Inactivation of colicin Y by intramembrane helixhelix interaction with its immunity protein). FEBS Journal. 2008, vol. 275, No 21, p. 5325 - 5331. ISSN 1742-464X.
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Interakcie kolicínov U a Y s receptorom OmpA. (Interactions of colicins U and Y with receptor OmpA.)BOSÁK, Juraj and David ŠMAJS. Interakcie kolicínov U a Y s receptorom OmpA. (Interactions of colicins U and Y with receptor OmpA.). In 52. Studentská vědecká konference LF MU. Sborník abstraktů. Brno: Lékařská fakulta Masarykovy univerzity, 2008, p. 18-19.
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ŠMAJS, David. Lidský genom: kam kráčí současný výzkum? (Human genom: the course of present research.). Brno: Masarykova univerzita, 2008, 6 pp. 41. ISSN 1211-3387.
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MIKALOVÁ, Lenka, Lenka AMBROŽOVÁ and David ŠMAJS. Mapování sekvenčních rozdílů opičího izolátu Treponema pallidum Fribourg-Blanc a lidských patogenních spirochet. (Simian isolate of Treponema pallidum Fribourg-Blanc: mapping the genome differences.). In 52. Studentská vědecká konference LF MU. Sborník abstraktů. 2008.
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FLASAROVÁ, Magdalena and David ŠMAJS. PCR detekce a kmenová typizace spirochety Treponema pallidum v biologickém materiálu. (PCR detection and subtyping of Treponema pallidum in biological specimens.). In Tomáškovy dny 2008. Sborník abstraktů. 2008.
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BOSÁK, Juraj and David ŠMAJS. Rozdiely v interakcii kolicínov U a Y s receptorom OmpA. (Interaction differences with OmpA receptor between colins U and Y.). In Setkání biochemiků a molekulárních biologů. Sborník příspěvků. Brno: Masarykova univerzita, 2008, p. 62-63. ISBN 978-80-210-4526-2.
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STROUHAL, Michal, Lenka MIKALOVÁ, Petra MATĚJKOVÁ and David ŠMAJS. Rozdíly ve struktuře genomu u vybraných zástupců rodu Treponema. (Structure differences in genomes of chosen Treponema genus representatives.). In Tomáškovy dny 2008, sborník abstraktů. Brno: Mikrobiologický ústav LF MU, 2008, p. 38-39.
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ZOBANÍKOVÁ, Marie, Petra MATĚJKOVÁ, Michal STROUHAL, Darina ČEJKOVÁ and David ŠMAJS. Sekvenace genomu Treponema pallidum subspecies pertenue Samoa D: srovnání tří metod celogenomové sekvenace. (Sequencing of Treponema pallidum subspecies pertenue Samoa D genome: comparison of three methods of whole genome sequencing.). In XII. Setkání biochemiků a molekulárních biologů. Sborník příspěvků. Brno: Masarykova univerzita, 2008, p. 19-20. ISBN 978-80-210-4526-2.
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ŠMAJS, David, Petra MATĚJKOVÁ, Michal STROUHAL, Vladana WOZNICOVÁ and George M. WEINSTOCK. Sequencing and molecular typing of hypervariable loci in the Treponema pallidum genomes: characterizations of type strains and clinical isolates. In Clinical Microbiology and Infection, Volume 14, Issue s7, Abstracts of the 18th ECCMID, P1704. Neuveden: European Society of Clinical Microbiology and Infectious Diseases, 2008, p. 495. ISSN 1198-743X.
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FLASAROVÁ, Magdalena and David ŠMAJS. Spirocheta Treponema pallidum a její detekce v klinickém materiálu. (Detection of the spirochete Treponema pallidum in clinical samples.). In 52. Studentská vědecká konference LF MU. Sborník abstraktů. 2008.
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ZOBANÍKOVÁ, Marie and David ŠMAJS. Srovnání tří celogenomových sekvenačních metod při sekvenaci genomu Treponema pallidum subspecies pertenue Samoa D (Three whole genome sequencing methods: the genome of Treponema pallidum subspecies pertenue Samoa D). In 52. Studentská vědecká konference LF MU. Sborník abstraktů. 2008.
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Srovnání typovacích systémů u Treponema pallidum. (Comparison of Treponema pallidum typing systems.)MATĚJKOVÁ, Petra, Michal STROUHAL, David ŠMAJS and Vladana WOZNICOVÁ. Srovnání typovacích systémů u Treponema pallidum. (Comparison of Treponema pallidum typing systems.). In XII. Setkání biochemiků a molekulárních biologů. Sborník příspěvků. Brno: Masarykova univerzita, 2008, p. 15. ISBN 978-80-210-4526-2.
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WOZNICOVÁ, Vladana, Eliška DASTYCHOVÁ, David ŠMAJS, Petra MATĚJKOVÁ, Magdalena FLASAROVÁ and Zuzana VALIŠOVÁ. Syfilis u pacientů označovaných jako "men having sex with men" - význam přímého průkazu metodou PCR (Syphilis in men having sex with men - importance of direct proof). Dermatologie pro praxi. Olomouc: Solen s.r.o., 2008, vol. 2, No 4, p. 199-201. ISSN 1802-2960.
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FLASAROVÁ, Magdalena, Petra MATĚJKOVÁ, Zuzana VALIŠOVÁ, David ŠMAJS and Vladana WOZNICOVÁ. Treponema pallidum ssp. pallidum a její detekce v klinickém materiálu. (Detection of Treponema pallidum in clinical material). In Celostátní sjezd mikrobiologie a epidemiologie, sborník abstrakt. 2008.
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BOSÁK, Juraj and David ŠMAJS. Zmapovanie interakcií kolicínov U a Y s receptorom OmpA (Mapping the interactions of colicins U and Y with their receptor OmpA). In XVII. Tomáškovy dny. Sborník abstraktů, str. 2-3, Brno. 2008.
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ČEJKOVÁ, Darina and David ŠMAJS. Analýza sigma 54 závislých promotorových oblastí Treponema pallidum. (Analysis of sigma 54 dependent promoters of Treponema pallidum.). In XI. Setkání biochemiků a molekulárních biologů. Sborník příspěvků. Brno: Masarykova univerzita v Brně, 2007, p. 4-5. ISBN 978-80-210-4234-6.
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JANALÍKOVÁ, Magda, David ŠMAJS, L. ČECHOVÁ and M. MAROUNEK. Bakteriocinotypizace kmenů Escherichia coli izolovaných z masa (Bacteriocin typing of Escherichia coli strains isolated from meat). In Sborník abstraktů Tomáškovy dny 2007. 2007.
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STROUHAL, Michal, Petra MATĚJKOVÁ, David ŠMAJS, E. SODERGREN, S. J. NORRIS and G. M. WEINSTOCK. Comparative genomics of closely related treponemal strains. In In Abstract Book: 17th European Congress of Clinical Microbiology and Infectous Diseases, INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS. Munich, Germany: European Congress of Clinical Microbiology and Infectous Diseases, 2007, p. 915. ISSN 0924-8579.
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WEINSTOCK, George M., David ŠMAJS, Petra MATĚJKOVÁ, Timothy PALZKILL and Steven J. NORRIS. Comparative pathogenomics of spirochetes. In Bacterial Pathogenomics. Washington DC: ASM, 2007, p. 141-159. ASM Press. ISBN 978-1-55581-451-9.
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STROUHAL, Michal and David ŠMAJS. Complete sequence of low-copy-number plasmid MccC7-H22 of probiotic Escherichia coli H22 and the prevalence of mcc genes among human E. coli. In The 4th International Conference of Postgraduate Medical Students,Abstract book. Hradec Králové: Karlova univerzita v Praze, 2007, p. 105-109. ISBN 978-80-254-0839-1.
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ŠMAJS, David. člen podoborové komise 310 GAČR. 2007.
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WOZNICOVÁ, Vladana, David ŠMAJS, Dan WECHSLER, Magdalena FLASAROVÁ and Petra MATĚJKOVÁ. Detection of Treponema pallidum subsp. pallidum SS14 from Skin Lesions,Serum, and CSF in an Infant with Congenital Syphilis after Clindamycin treatment of the mother during pragnancy. (Detection of Treponema pallidum subsp. pallidum SS14 from Skin Lesions,Serum, and CSF in an Infant with Congenital Syphilis after Clindamycin.). Journal of Clinical Microbiology. 2007, vol. 2007, No 45, p. 659-661. ISSN 0095-1137.
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FLASAROVÁ, Magdalena, Petra MATĚJKOVÁ, David ŠMAJS, Vladana WOZNICOVÁ and Monika DVOŘÁKOVÁ HEROLDOVÁ. Detekce a kmenová typizace spirochety Treponema pallidum subsp. pallidum v biologických vzorcích (Detection and typing of Treponema pallidum subsp. pallidum in biological samples). In Sborník abstraktů Tomáškovy dny 2007. 2007.
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FLASAROVÁ, Magdalena, Petra MATĚJKOVÁ, David ŠMAJS, Vladana WOZNICOVÁ and Monika DVOŘÁKOVÁ HEROLDOVÁ. Diagnostika a kmenová typizace spirochety Treponema pallidum v klinickém materiálu. (Diagnosis and typing of Treponema pallidum in clinical material.). In 22. Pečenkovy epidemiologické dny. Abstrakta. 2007.
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FLASAROVÁ, Magdalena and David ŠMAJS. Diagnostika a kmenová typizace spirochety Treponema pallidum v klinickém materiálu. (Diagnostics and typing of Treponema pallidum in clinical specimens.). In 51. Studentská vědecká konference. Program a abstrakta. 2007.
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VALIŠOVÁ, Zuzana, Vladana WOZNICOVÁ, Magdalena FLASAROVÁ, Petra MATĚJKOVÁ and David ŠMAJS. Diagnostika časné syfilis metodou PCR - klinická charakteristika vyšetřovaných a význam vyšetření. (Diagnosis of early syphilis by PCR - clinical data on tested patients.). In 22. Pečenkovy epidemiologické dny. Abstrakta. 2007.
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STROUHAL, Michal, David ŠMAJS and Petra MATĚJKOVÁ. Genetické rozdíly mezi původci yaws a syfilis. (Genetic differences between causative agents of yaws and syfilis.). In XI. Setkání biochemiků a molekulárních biologů. Sborník příspěvků. Brno: Masarykova univerzita v Brně, 2007, p. 13-14. ISBN 978-80-210-4234-6.
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STROUHAL, Michal, David ŠMAJS, Petra MATĚJKOVÁ, Erica SODERGREN, Anita G. AMIN, Jerrilyn K. HOWELL, Steven J. NORRIS and George M. WEINSTOCK. Genome Differences between Treponema pallidum subsp. pallidum Strain Nichols and T. paraluiscuniculi Strain Cuniculi A. INFECTION AND IMMUNITY. The American Society for Microbiology, 2007, vol. 75, No 12, p. 5859-5866. ISSN 0019-9567.
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ŠMAJS, David. Genome of Treponema pallidum subsp. pertenue Samoa D:Comparison of pyrosequencing and comparative genome sequencing. In Seminář Genome sequencer FLX. 2007.
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ŠMAJS, David, Petra MATĚJKOVÁ, Michal STROUHAL, Darina ČEJKOVÁ, Marie ZOBANÍKOVÁ and Jan ŠMARDA. Genomová struktura spirochet rodu Treponema. (Genome structure of the Treponema spirochetes.). In 24. Kongres Československé společnosti mikrobiologické.Abstrakty. Liberec: Československá společnost mikrobiologická, 2007, p. 62-62. ISSN 0009-0646.
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DOLEŽALOVÁ, Magda, Milan MAROUNEK, Pavel BŘEZINA, Ivo SEDLÁČEK and David ŠMAJS. Charakteristika mikroflóry povrchu chlazené drůbeže. (Characterization of skin microflora from cooled chicken.). In Abstrakty. 24. Kongres ČsSM. Praha-Bratislava: Československá společnost mikrobiologická, 2007, p. 185-185. ISSN 0009-0646.
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ZOBANÍKOVÁ, Marie, Petra MATĚJKOVÁ, Michal STROUHAL and David ŠMAJS. Kompletní genomová sekvenace kmene Treponema pallidum subsp. pertenue Samoa D: srovnání pyrosekvencování a komparativní genomové sekvenace (Whole genome sequencing of Treponema pallidum subspecies pertenue Samoa D: comparison of pyrosequencing and comparative genome sequencing). In Sborník abstraktů Tomáškovy dny 2007. 2007.
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BOSÁK, Juraj and David ŠMAJS. Molekulárne mapovanie interakcií kolicinov U a Y s receptorom OmpA (Molecular interaction between colicins U and Y with receptor OmpA). In 51. Studentská vědecká konference. Program a abstrakta. 2007.
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ŠMARDA, Jan, David ŠMAJS, Marie LHOTOVÁ and Daniela DĚDIČOVÁ. Occurence of strains producing specific anti-bacterial inhibitory agents in five genera of Enterobacteriaceae. Current Microbiology. New York: Springer Verlag, 2007, vol. 2007, No 54, p. 113-118, 7 pp. ISSN 0343-8651.
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ŠMAJS, David. PCR diagnostika a molekulární typizace původce syfilis: aktuální problémy PCR detekce. (PCR diagnostics of syphilis: problems and solutions.). In Rutinní analýza nukleových kyselin molekulárně-biologickými technikami. 2007.
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MATĚJKOVÁ, Petra, David ŠMAJS and Vladana WOZNICOVÁ. Pilotní screening hypervariabilních lokusů v genomu Treponema pallidum u typových kmenů a klinických izolátů (Pilot screening of variable genome sites of Treponema pallidum: type strains and clinical specimens). In 24. Kongres Československé společnosti mikrobiologické. Abstrakty. Liberec: Československá společnost mikrobiologická, 2007, p. 149-149. ISSN 0009-0646.
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MIKALOVÁ, Lenka, Petra KOTRSALOVÁ, Jan ŠMARDA and David ŠMAJS. Produkce specifických antibakteriálních agens u rodů Salmonella a Yersinia. (Specific antibacterial agents in Salmonella a Yersinia.). In XI. Setkání biochemiků a molekulárních biologů. Sborník příspěvků. Brno: Masarykova univerzita v Brně, 2007, p. 69-70. ISBN 978-80-210-4234-6.
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KOTRSALOVÁ, Petra, Jan ŠMARDA and David ŠMAJS. Produkce specifických antibakteriálních agens u rodu Yersinia (Specific antibacterial agents in the genus Yersinia). In Sborník abstraktů Tomáškovy dny 2007. 2007.
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MIKALOVÁ, Lenka, Jan ŠMARDA and David ŠMAJS. Produkce specifických antibakteriálních agens u Salmonella enterica (Specific antibacterial agents in the genus Salmonella). In Sborník abstraktů Tomáškovy dny 2007. 2007.
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ČEJKOVÁ, Darina, Petra MATĚJKOVÁ, Michal STROUHAL, Marie ZOBANÍKOVÁ, David ŠMAJS and George M. WEINSTOCK. Pyrosequencing as a tool for whole genome sequencing of Treponema pallidum subspecies. Chemické Listy. Praha: Asociace českých chemických společností, 2007, vol. 101, No 5, p. 431-432. ISSN 0009-2770.
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ŠMAJS, David. Sekvenace genomů patogenních treponem: Sangerova sekvenace, komparativní genomová sekvenace a pyrosekvenace. (.). In Biotechnika 2007. 2007.
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MATĚJKOVÁ, Petra, Michal STROUHAL, David ŠMAJS, S. J. NORRIS and G. M. WEINSTOCK. Sequencing of Treponema pallidum ssp. pertenue Samoa D genome. In In Abstract Book: 17th European Congress of Clinical Microbiology and Infectous Diseases. INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS. Munich, Germany: European Congress of Clinical Microbiology and Infectous Diseases, 2007, p. 238. ISSN 0924-8579.
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ŠMARDA, Jan and David ŠMAJS. Spontánní výskyt lyzogenie a bakteriocinogenie v druzích sedmi rodů čeledi Enterobacteriaceae (Prevalence of lysogenic and colicinogenic strains in seven genera of Enterobacteriaceae). In 24. Kongres Československé společnosti mikrobiologické. Abstrakta. Liberec: Československá společnost mikrobiologická, 2007, p. 281. ISSN 0009-0646.
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ZOBANÍKOVÁ, Marie and David ŠMAJS. Srovnání komparativní genomové sekvenace a pyrosekvenace u Treponema pallidum subspecies pertenue Samoa D (CGS and pyrosequencing of Treponema pallidum subspecies pertenue Samoa D). In 51. Studentská vědecká konference. Program a abstrakta. 2007.
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ZOBANÍKOVÁ, Marie, Michal STROUHAL, Petra MATĚJKOVÁ, Darina ČEJKOVÁ and David ŠMAJS. Srovnání pyrosekvenování a komparativní genomové sekvenace u Treponema pallidum subsp. pertenue Samoa D. (Comparison of Pyrosequencing and comparative genome sequencing of Treponema pallidum subsp. pertenue Samoa D). In 24. Kongres Československé společnosti mikrobiologické. Abstrakty. Liberec: Československá společnost mikrobiologická, 2007, p. 155-155. ISSN 0009-0646.
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MATĚJKOVÁ, Petra, Magdalena FLASAROVÁ, David ŠMAJS and Vladana WOZNICOVÁ. Testování kandidátních lokusů pro typizaci klinických izolátů Treponema pallidum. (Candidate loci for clinical testing of Treponema pallidum.). In XI. Setkání biochemiků a molekulárních biologů. Sborník příspěvků. Brno: Masarykova univerzita v Brně, 2007, p. 8-9. ISBN 978-80-210-4234-6.
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FLASAROVÁ, Magdalena, Petra MATĚJKOVÁ, David ŠMAJS, Vladana WOZNICOVÁ and Zuzana VALIŠOVÁ. Treponema pallidum subsp. pallidum - detekce pomocí metody PCR a kmenová typizace. (Treponema pallidum subsp. pallidum - PCR detection and molecular typing). In Seminář ČSSM na téma Syfilis. 2007.
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Typy antibakteriálních agens u Salmonella enterica (Antibacterial agents in the Salmonella enterica)MIKALOVÁ, Lenka and David ŠMAJS. Typy antibakteriálních agens u Salmonella enterica (Antibacterial agents in the Salmonella enterica). In 51. Studentská vědecká konference. Program a abstrakta. 2007.
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KOTRSALOVÁ, Petra and David ŠMAJS. Typy produkovaných antibakteriálních agens u druhů rodu Yersinia. (Types of antibacterial agents produced by Yersinia.). In 51. Studentská vědecká konference. Program a abstrakta. 2007.
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ČEJKOVÁ, Darina, Michal STROUHAL, Petra MATĚJKOVÁ and David ŠMAJS. Určení kompletní genomové sekvence kmene Treponema pallidum subsp. pertenue CDC-2 (Complete genome sequence of Treponema pallidum subsp. pertenue CDC-2). In Sborník abstraktů Tomáškovy dny 2007. 2007.
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ČEJKOVÁ, Darina and David ŠMAJS. Určení kompletní genomové sekvence kmene Treponema pallidum subspecies pertenue CDC-2 (Complete genome sequence of Treponema pallidum subspecies pertenue CDC-2). In 51. Studentská vědecká konference. Program a abstrakta. 2007.
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STROUHAL, Michal and David ŠMAJS. Určení kompletní nukleotidové sekvence plazmidu MCCC7-H22 probiotického kmene Escherichia coli H22 (Complete sequence of plasmid MCCC7-H22 isolated from Escherichia coli H22). In 51. Studentská vědecká konference. Program a abstrakta. 2007.
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MIKOLKA, Pavol and David ŠMAJS. Určovanie genómovej sekvencie Treponema pallidum subspecies pallidum kmeňa Dallas 1 (Complete genome sequence of Treponema pallidum subspecies pallidum Dallas 1). In 51. Studentská vědecká konference. Program a abstrakta. 2007.
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VALIŠOVÁ, Zuzana, Vladana WOZNICOVÁ, Magdalena FLASAROVÁ, Petra MATĚJKOVÁ, David ŠMAJS and Jana RAČOVSKÁ. Význam diagnostiky časné syfilis metodou PCR. In Seminář ČSSM na téma Syfilis. 2007.
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ČEJKOVÁ, Darina and David ŠMAJS. Analýza sigma-54 závislých promotorů spirochety Treponema pallidum. (Analysis of sigma-54 dependent promoters in Treponema pallidum.). In Jubilejní 50. studentská vědecká konference. Program a abstrakta. 2006.
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ŠMAJS, David. Comparative Genomics of Treponemes. (Komparativní genomika Treponem.). In Gordon Research Conference 2006, Biology of Spirochetes. Barga, Italy, 2006.
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MATĚJKOVÁ, Petra and David ŠMAJS. Comparison ot the syphilis and yaws spirochete genomes: comparative genome sequencing of T. pallidum ssp. pallidum Samoa D. (Comparison ot the syphilis and yaws spirochete genomes: comparative genome sequencing of T. pallidum ssp. pallidum Samoa D). In International Medical Postgraduate Conference. Abstract Book. 2006.
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ŠMAJS, David. člen oborové komise 310. GAČR, 2006.
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FLASAROVÁ, Magdalena, David ŠMAJS, Petra MATĚJKOVÁ, Vladana WOZNICOVÁ and Monika HEROLDOVÁ-DVOŘÁKOVÁ. Detekce původce syfilis Treponema pallidum subsp. pallidum v klinických vzorcích. (Molecular Detection and Subtyping of Treponema pallidum subsp. pallidum in Clinical Specimens.). In Tomáškovy dny 2006. Sborník abstraktů. 2006.
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FLASAROVA, Magdalena, Petra MATĚJKOVÁ, David ŠMAJS, Vladana WOZNICOVÁ and Monika DVOŘÁKOVÁ-HEROLDOVÁ. Detekce Treponema pallidum subsp. pallidum v biologickém materiálu, výhledy pro epidemiologii syfilis (Detection of Treponema pallidum subsp. pallidum in clinical material, epidemiologic consequences). In XXI. Pečenkovy epidemiologické dny. Brno: Konvoj, s.r.o., 2006, p. S1, 1 pp. ISBN 80-7302-114-5.
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ŠMAJS, David, Petra MATĚJKOVÁ, Vladana WOZNICOVÁ and Z. VALIŠOVÁ. Diagnosis of syphilis by polymerase chain reaction and molecular typing of Treponema pallidum. Reviews in Medical Microbiology. 2006, vol. 17, No 4, p. 93-100. ISSN 0954-139X.
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FLASAROVÁ, Magdalena and David ŠMAJS. Diagnostika spirochety Treponema pallidum v biologických vzorcích pomocí PCR. (Diagnostics of Treponema pallidum in clinical material). In Jubilejní 50. studentská vědecká konference. Program a abstrakta. 2006.
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CURSINO, L., David ŠMAJS, Jan ŠMARDA, R.M.D. NARDI, J.R. NICOLI, E. CHARTONE-SOUZA and A.M.A. NASCIMENTO. Exoproducts of the strain Escherichia coli H22 inhibiting some enteric pathogens both in vitro and in vivo. Journal of Applied Microbiology. Oxford, UK: Blackwell Science Ltd, 2006, vol. 100, No 4, p. 821-829. ISSN 1364-5072.
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ČEJKOVÁ, Darina and David ŠMAJS. Identifikace a charakterizace sigma-54 závislých promotorů Treponema pallidum. (Identification and characterization of sigma-54-dependent promoters of Treponema pallidum.). In Tomáškovy dny 2006. Sborník abstraktů. 2006.
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ŠMARDA, Jan, David ŠMAJS and Sabina HORYNOVÁ. Incidence of lysogenic, colicinogenic and siderophore producer strains among human saprophytic Escherichia coli. Folia Microbiologica. 2006, vol. 51, No 5, p. 387-391. ISSN 0015-5632.
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STROUHAL, Michal, David ŠMAJS and Petra MATĚJKOVÁ. Komparativní genomika patogenních kmenů T. pallidum. (Comparative genomics of pathogenic strains of T. pallidum.). In Tomáškovy dny 2006. Sborník abstraktů. 2006.
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STROUHAL, Michal, Petra MATĚJKOVÁ and David ŠMAJS. Komparativní genomika patogenních kmenů T. pallidum. (Comparative genomics of pathogenic strains of T. pallidum.). In X. Pracovní setkání biochemiků a molekulárních biologů. Sborník příspěvků. 2006th ed. Brno: Masarykova univerzita v Brně, 2006, p. 17. ISBN 80-210-3942-6.
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MATĚJKOVÁ, Petra, Michal STROUHAL and David ŠMAJS. Komparativní genomová sekvenace (CGS) kmenů rodu Treponema. (Comparative Genome Sequencing in the genus Treponema.). In Tomáškovy dny 2006 sborník abstraktů. 2006.
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MATĚJKOVÁ, Petra and David ŠMAJS. Komparativní genomová sekvenace (CGS): nový typ sekvenování bakteriálních genomů. (Comparative genome sequencing (CGS): New sequencing strategy for bacterial genomes.). In X. Pracovní setkání biochemiků a molekulárních biologů. Sborník příspěvků. Brno: Masarykova univerzita v Brně, 2006, p. 12-13. ISBN 80-210-3942-6.
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FLASAROVÁ, Magdalena, Petra MATĚJKOVÁ, David ŠMAJS and Vladana WOZNICOVÁ. Molekulárně-biologická diagnostika spirochety Treponema pallidum v biologickém materiálu. (Molecular detection and subtyping of Treponema pallidum subsp. pallidum in clinical specimens). In X. Pracovní setkání biochemiků a molekulárních biologů. Sborník příspěvků. Brno: Masarykova univerzita v Brně, 2006, p. 7. ISBN 80-210-3942-6.
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FLASAROVA, Magdalena, David ŠMAJS, Petra MATĚJKOVÁ, Vladana WOZNICOVÁ, Monika HEROLDOVÁ-DVOŘÁKOVÁ and Miroslav VOTAVA. Molekulární detekce a typizace Treponema pallidum subsp. pallidum v klinickém materiálu. (Molecular detection and subtyping of Treponema pallidum subsp. pallidum in clinical specimens.). Epidemiologie, mikrobiologie, imunologie. Praha: Česká lékařská společnost J. E. Purkyně, 2006, vol. 55, No 3, p. 105-111. ISSN 1210-7913.
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MATĚJKOVÁ, Petra, Michal STROUHAL, David ŠMAJS, J.K. HOWELL, S.J. NORRIS, T.J. ALBERT and G.M. WEINSTOCK. Oligonucleotide array sequencing of T.pallidum ssp. pallidum strain SS14. In Gordon Research Conference 2006, Biology of Spirochetes. Barga, Italy, 2006, 1 pp.
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ŠMAJS, David, Petra MATĚJKOVÁ and G.M. WEINSTOCK. Recognition of pore-forming colicin Y by its cognate immunity protein. FEMS Microbiology Letters. United Kingdom: Blackwell Publishing Ltd., 2006, vol. 258, No 1, p. 108-113. ISSN 0378-1097.
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STROUHAL, Michal and David ŠMAJS. Restrikční mapování blízce příbuzných spirochet rodu Treponema. (Restriction mapping of closely related treponemal genomes). In Jubilejní 50. studentská vědecká konference. Program a abstrakta. 2006.
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MATĚJKOVÁ, Petra and David ŠMAJS. Sekvenace heterologních oblastí genomu T. pallidum sussp. pertenue kmene Samoan D: cesta ke kompletní genomové sekvenci původce yaws. (Sequencing of the genome of T. pallidum subsp. pertenue strain Samoa D). In Jubilejní 50. studentská vědecká konference. Program a abstrakta. 2006.
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ČEJKOVÁ, Darina, Petra MATĚJKOVÁ and David ŠMAJS. Studium promotorů Treponema pallidum: charakterizace promotorů pro faktor sigma-54. (Promoters of Treponema pallidum: promoters for sigma-54.). In X. Pracovní setkání biochemiků a molekulárních biologů. Sborník příspěvků. Brno: Masarykova univerzita v Brně, 2006, p. 5. ISBN 80-210-3942-6.
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DVOŘÁK, Petr, Marie KOPECKÁ, Jakub NERADIL, Iva SLANINOVÁ and David ŠMAJS. Techniky molekulární biologie a genetiky. Elportál. Brno: Masarykova univerzita, 2006. ISSN 1802-128X.
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BOSÁK, Juraj and David ŠMAJS. Zmapovanie interakcií kolicínov U a Y s receptorom OmpA. (Mapping of colicin U and Y interactions with OmpA receptor.). In Tomáškovy dny 2008. Sborník abstraktů. 2006.
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ŠMAJS, David, Petra MATĚJKOVÁ, Michal STROUHAL, S.J. NORRIS and G.M. WEINSTOCK. Comparing genomes of pathogenic and non-pathogenic spirochetes: DNA-microarray hybridizations, whole genome fingerprinting and DNA sequencing. In Abstract Book of NATO Advanced Research Workshop on Molecular Biology of Spirochetes. 2005.
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ŠMAJS, David, Michal STROUHAL, Petra MATĚJKOVÁ, S.J. NORRIS and G.M. WEINSTOCK. Comparison of the genomes of pathogenic treponemes, Treponema pallidum ssp. pallidum, ssp. pertenue and Treponema paraluiscuniculi. In Clinical Microbiology and Infection. United Kingdom: Blackwell Publishing, 2005, p. 248. ISSN 1470-9465.
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ŠMAJS, David. člen podoborové komise 310. GAČR, 2005.
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WEINSTOCK, G.M., David ŠMAJS, Petra MATĚJKOVÁ, S.J. NORRIS, T. PALZKILL, T.J. ALBERT and E. SODERGREN. Genomics of Treponema. In Abstract Book of NATO Advanced Research Workshop on Molecular Biology of Spirochetes. 2005.
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STROUHAL, Michal and David ŠMAJS. Genomová amplifikace a restrikční mapování patogenních spirochet rodu Treponema. (Genomic amolifications and restriction mapping of pathogenic spirochetes of the genus Treponema.). In Abstrakta 49. Studentské vědecké konference. 2005.
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MATĚJKOVÁ, Petra and David ŠMAJS. Genomová hybridizace kmenů T. pallidum Nichols a SS14 na oligonukleotidovém čipu (Genome hybridizations of T. pallidum strains Nichols and SS14 on the oligonucleotide array). In Sborník abstraktů XIV. Tomáškových dnů 2005. 2005.
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ČEJKOVÁ, Darina and David ŠMAJS. Identifikace regulátorů genové exprese u Treponema pallidum. (Identification of gene expression regulators in Treponema pallidum.). In Sborník příspěvků IX. Pracovního setkání biochemiků a molekulárních biologů. Brno: Přírodovědecká fakulta MU, 2005, p. 5. ISBN 80-210-3635-4.
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MATĚJKOVÁ, Petra and David ŠMAJS. Komparativní genomika Treponema pallidum technikou genomové hybridizace na oligonukleotidovém čipu. (Comparative genomics of T. pallidum strains Nichols and SS14 on the oligonucleotide array). In Abstrakta 49. Studentské vědecké konference. 2005.
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STROUHAL, Michal and David ŠMAJS. Mapování genomů patogenních spirochet. (Genoe mapping of pathogenic spirochetes). In Sborník příspěvků IX. Pracovního setkání biochemiků a molekulárních biologů. Brno: Přírodovědecká fakulta MU, 2005, p. 17-18. ISBN 80-210-3635-4.
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JANALÍKOVÁ, Magda, David ŠMAJS and Jan ŠMARDA. Molecular recognition of colicin U and Y pore-forming domains by their cognate immunity proteins. In Supplement Abstracts of 12th European Conference on Bacterial Protein Toxins. 2005.
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JANALÍKOVÁ, Magda and David ŠMAJS. Molekulární interakce kolicinu se svým imunitním proteinem. (Molecular interaction of colicin U with immunity protein). In Abstrakta 49. Studentské vědecké konference. 2005.
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JANALÍKOVÁ, Magda and David ŠMAJS. Molekulární interakce kolicinu U se svým imunitním proteinem. (Molecular interaction of colicin U with its immunity protein). In Chemické listy 99. ČR: ČCHS, 2005, p. 364. ISSN 0009-2770.
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JANALÍKOVÁ, Magda and David ŠMAJS. Molekulární interakce mezi kolicinem U a jeho imunitním proteinem. (Molecular interaction between colicin U and its immunity protein). In Sborník příspěvků IX. Pracovního setkání biochemiků a molekulárních biologů. Brno: Přírodovědecká fakulta MU, 2005, p. 7. ISBN 80-210-3635-4.
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JANALÍKOVÁ, Magda and David ŠMAJS. Molekulární rozpoznávání kolicinů U a Y svými imunitními proteiny. (Molecular recognition of colicin U and Y by their immunity proteins). In Sborník abstraktů XIV. Tomáškových dnů 2005. 2005.
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MATĚJKOVÁ, Petra, David ŠMAJS, T.J. ALBERT, S.J. NORRIS and G.M. WEINSTOCK. Reproducibility of Comparative Genomics Sequencing in Treponema pallidum ssp. pallidum. In Abstract Book of NATO Advanced Research Workshop on Molecular Biology of Spirochetes. 2005.
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STROUHAL, Michal and David ŠMAJS. Restrikční mapování genomů blízce příbuzných patogenních spirochet rodu Treponema. (Restriction mapping of closely related pathogenic spirochetes of the genus Treponema). In Sborník abstraktů XIV. Tomáškových dnů 2005. 2005.
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STROUHAL, Michal and David ŠMAJS. Restrikční mapování genomů blízce příbuzných spirochet rodu Treponema. (restriction mapping of the treponemal genomes). In Chemické listy. ČR: ČCHS, 2005, p. 386-387. ISSN 0009-2770.
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ČEJKOVÁ, Darina and David ŠMAJS. Studium domnělých regulátorů genové exprese a sigma 54-závislých promotorů spirochety Treponema pallidum. (PUTATIVE GENE EXPRESSION REGULATORS AND 54-DEPENDENT PROMOTERS OF THE SPIROCHETE TREPONEMA PALLIDUM). In Sborník abstraktů XIV. Tomáškových dnů 2005. 2005.
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ČEJKOVÁ, Darina and David ŠMAJS. Studium domnělých regulátorů genové exprese spirochety Treponema pallidum. (Putative gene regulators in Treponema pallidum). In Abstrakta 49. Studenstské vědecké konference. 2005.
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MATĚJKOVÁ, Petra, David ŠMAJS, S.J. NORRIS and G.M. WEINSTOCK. Studium genové exprese u T. pallidum. (Gene expression profiling in T. pallidum). In Sborník příspěvků IX. Pracovního setkání biochemiků a molekulárních biologů. 2005th ed. Brno: Přírodovědecká fakulta MU, 2005, p. 11. ISBN 80-210-3635-4.
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ŠMAJS, David, M. MCKEVITT, J.K. HOWELL, S.J. NORRIS, W.W. CAI, T. PALZKILL and G.M. WEINSTOCK. Transcriptome of Treponema pallidum: gene expression profile during experimental rabbit infection. J. Bacteriol. 2005, vol. 2005, No 187, p. 1866-1874. ISSN 0021-9193.
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WEINSTOCK, George M., David ŠMAJS, Petra MATĚJKOVÁ, Michal STROUHAL, Thomas J. ALBERT, Steven J. NORRIS, Timothy PALZKILL and Erica J. SODERGREN. Treponema Genomics. In Molecular Biology of Spirochetes. Praha: Státní zdravotní ústav., 2005, p. 96-100. Volume 373 NATO Science Series. ISBN 1-58603-665-3.
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ŠMAJS, David, Petra MATĚJKOVÁ, S.J. NORRIS and G.M. WEINSTOCK. Comparative genomics of Treponema pallidum ssp. pallidum and Treponema paraluiscuniculi. Clin. Microbiol. Infec. 2004, vol. 10, No 3, p. 452. ISSN 1198-743X.
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SESHADRI, R., G.S.A. MYERS, H. TETTELIN, J.A. EISEN, J.F. HEIDELBERG, R.J. DODSON, T.M. DAVIDSEN, R.T. DEBOY, D.E. FOUTS, D.H. HAFT, J. SELENGUT, O. REN, L.M. BRINKAC, R. MADUPU, J. KOLONAY, S.A. DURKIN, S.C. DAUGHERTY, J. SHETTY, A. SHVARTSBEYN, E. GEBREGEORGIS, K. GEER, G. TSEGAYE, J. MALEK, B. AYODEJI, S. SHATSMAN, M.P. MCLEOD, David ŠMAJS, J.K. HOWELL, S. PAL, A. AMIN, P. VASHISTH, T.Z. MCNEILL, G.M. WEINSTOCK, S.J. NORRIS, C.M. FRASER and I.T. PAULSEN. Comparison of the genome of the oral pathogen, Treponema denticola, with other spirochete genomes. Proc. Nat. Acad. Sci. 2004, vol. 101, p. 5646-5651.
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ŠMAJS, D., S.J. NORRIS and G.M. WEINSTOCK. Construction of Treponema pallidum BAC library for functional and genomic applications. Methods Mol. Biol. 2004, vol. 255, p. 47-56.
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ŠMAJS, David. člen podoborové komise 310. GAČR, 2004.
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ŠMAJS, David. FEMS Research Fellowship 2004, Vienna, Austria. Federation of European Microbiological Societies, 2004.
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MATĚJKOVÁ, Petra, David ŠMAJS, S.J. NORRIS and G.M. WEINSTOCK. Genome differences and detection of pathogenic Treponema pallidum subspecies. Clin. Microbiol. Infec. 2004, vol. 10, No 3, p. 451-452. ISSN 1198-743X.
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ŠMAJS, David and Magda JANALÍKOVÁ. Hybrid colicins U/Y and their interaction with cognate immunity proteins. In VIII. Pracovní setkání biochemiků a molekulárních biologů. Sborník příspěvků, Masarykova univerzita v Brně, 2004. Brno: Masarykova univerzita v Brně, 2004, p. 11-12. ISBN 80-210-3321-5.
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JANALÍKOVÁ, Magda and David ŠMAJS. Hybridní molekuly kolicinů U/Y a jejich interakce s imunitními proteiny (Hybrid colicin U/Y Molecules and their interactyion with immunity proteins). In Sborník abstraktů XIII. konference mladých mikrobiologů Tomáškovy dny 2004. 2004th ed. Brno: Lékařská fakulta MU, 2004, p. 14.
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JANALÍKOVÁ, Magda and David ŠMAJS. Hybridní molekuly kolicinů U/Y a jejich interakce s imunitními proteiny (Hybrid colicin molecules U/Y and their interaction with immunity proteins). In 48. studentská vědecká konference LF MU v Brně. 6. 5. 2004. Brno: Masarykova univerzita v Brně, 2004, p. 20.
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ŠMAJS, David and Petra MATĚJKOVÁ. Interaction of colicins U and Y with recombinant immunity proteins. In VIII. Pracovní setkání biochemiků a molekulárních biologů. Sborník příspěvků. Brno: Masarykova univerzita v Brně, 2004, p. 17. ISBN 80-210-3321-5.
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MATĚJKOVÁ, Petra and David ŠMAJS. Nukleotidové polymorfismy u blízce příbuzných treponem a jejich detekce (Nucleotide polytmorphisms in genomes of closely related treponemes and their detection). In Sborník abstraktů XIII. konference mladých mikrobiologů Tomáškovy dny 2004. 2004th ed. Brno: Lékařská fakulta MU, 2004, p. 17 - 18, 1 pp.
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MATĚJKOVÁ, Petra and David ŠMAJS. Nukleotidové záměny v genomech blízce příbuzných treponem a jejich detekce (Nucleotide changes in the genomes of closely related treponemes). In Abstrakta 48. Studentské vědecké konference. 2004th ed. Brno: Lékařská fakulta MU, 2004, p. 29-30, 1 pp.
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VESELSKÁ, Renata, Miroslav GABRIEL, Roman JANISCH, Marie KOPECKÁ, Jakub NERADIL, Iva SLANINOVÁ, Augustin SVOBODA, David ŠMAJS and Jan ŠMARDA. Praktická cvičení z biologie. Protokoly - část I. 3. přepracované vydání. Brno: Masarykova univerzita, 2004, 48 pp.
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STROUHAL, Michal and David ŠMAJS. Restrikční mapování genomů blízce příbuzných spirochet rodu Treponema (Restriction mapping of closely related spirochetes of the genus Treponema). In Sborník abstraktů XIII. konference mladých mikrobiologů Tomáškovy dny 2004. 2004th ed. Brno: Lékařská fakulta MU, 2004, p. 16 - 17.
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STROUHAL, Michal and David ŠMAJS. Restrikční mapování genomů blízce příbuzných spirochet rodu Treponema (Restriction mapping of closely related treponemes). In Abstrakta 48. Studentské vědecké konference. 2004th ed. Brno: Lékařská fakulta MU, 2004, p. 42.
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STROUHAL, Michal and David ŠMAJS. Restrikční profil genomů vybraných zástupců rodu Treponema (Genomic restriction profiles of the selected strains of the genus Treponema). Bulletin Československé společnosti mikrobiologické. Praha-Bratislava: ČSSM, 2004, XXXXV, A, p. 275. ISSN 0009-0646.
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ŠMARDA, Jan. Specifická baktericidní agens v některých nových rodech čeledi Enterobacteriaceae (Specific bacteriocins in some new genera of the family Enterobacteriaceae). Brno: GAČR, 2004, 9 pp. 310/01/0013.
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ŠMAJS, David and Petra MATĚJKOVÁ. Treponema pallidum susp. pallidum v postgenomické éře (Treponema pallidum susp. pallidum in the postgenomic era). Bulletin Československé společnosti mikrobiologické. Praha-Bratislava: ČSSM, 2004, XXXXV, A, p. 114. ISSN 0009-0646.
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MATĚJKOVÁ, Petra, David ŠMAJS, SJ NORRIS and GM WEINSTOCK. Comparative genomics of pathogenic Treponema pallidum species. In Sborník příspěvků VII. Pracovní setkání biochemiků a molekulárních biologů. 2003rd ed. Brno: Masarykova univerzita, 2003, p. 3 - 4, 1 pp. ISBN 80-210-3053-4.
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MATĚJKOVÁ, Petra, David ŠMAJS, SJ NORRIS and GM WEINSTOCK. Comparative genomics of pathogenic Treponema pallidum subspecies. CHEMICKÉ LISTY. Praha: Česká společnost chemická, 2003, vol. 2003, No 97, p. 297-298. ISSN 0009-2770.
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ŠMAJS, David. Functional genomics as a tool to study pathogenic spirochetes. In Abstrakta XVII Biological Days - Memory in living systems. 2003rd ed. Brno: Československá biologická společnost a Biologický ústav, 2003, p. 18. ISBN 80-210-3264-2.
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JANALÍKOVÁ, Magda and David ŠMAJS. Hybridní molekuly kolicinů U/Y a jejich interakce s imunitním proteinem (Hybrid colicin U/Y molecules and interaction with immunity proteins). In Sborník abstraktů XII. konference mladých mikrobiologů Tomáškovy dny 2003. 2003rd ed. Brno: Lékařská fakulta MU, 2003, p. 15.
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JANALÍKOVÁ, Magda and David ŠMAJS. Hybridní molekuly kolicinů U/Y a jejich interakce s imunitním proteinem (Hybrid colicin U/Y molecules and their interaction with immunity proteins). In Abstrakta 47. Studentské vědecké konference. 2003rd ed. Brno: Lékařská fakulta MU, 2003, p. 12.
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MATĚJKOVÁ, Petra, David ŠMAJS, SJ NORRIS and GM WEINSTOCK. Komparativní genomika patogenních poddruhů treponema pallidum (Comparative genomics of pathogenic subspecies of Treponema pallidum). In Sborník abstraktů XII. konference mladých mikrobiologů Tomáškovy dny 2003. 2003rd ed. Brno: Lékařská fakulta MU, 2003, p. 14.
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MATĚJKOVÁ, Petra and David ŠMAJS. Komparativní genomika patogenních poddruhů Treponema pallidum (Comparative genomics of pathogenic Treponema pallidum subspecies). In Abstrakta 47. Studentské vědecké konference. 2003rd ed. Brno: Lékařská fakulta MU, 2003, p. 15 - 16, 1 pp.
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MCKEVITT, M., K. PATEL, David ŠMAJS, M. MARSH, S.J. NORRIS, G.M. WEINSTOCK and T. PALZKILL. Systematic cloning of Treponema pallidum open reading frames for protein expression and antigen discovery. Genome Res. 2003, vol. 13, p. 1665-1674.
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ŠMAJS, David, Jan ŠMARDA and G.M. WEINSTOCK. The Escherichia fergusonii iucABCD iutA genes are located within a longer chromosomal region similar to pathogenicity islands. (he Escherichia fergusonii iucABCD iutA genes are located within a longer chromosomal region similar to pathogenicity islands.). Folia Microbiologica. 2003, 48/2003, No 48, p. 139-147. ISSN 0015-5632.
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ŠMAJS, David, Petra MATĚJKOVÁ, SJ NORRIS and GM WEINSTOCK. Transcriptome of Treponema pallidum: gene expression profile during experimental rabbit infection. FEMS Congress of European Microbiologists. Slovenia, Ljubljana: FEMS, 2003, vol. 1, No 1, p. 459. ISSN 0378-1097.
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ŠMAJS, David, Petra MATĚJKOVÁ, SJ NORRIS and GM WEINSTOCK. Transcriptome of Treponema pallidum: gene expression profile during experimental rabbit infection. CHEMICKÉ LISTY. Praha: Česká společnost chemická, 2003, vol. 2003, No 97, p. 311. ISSN 0009-2770.
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ŠMAJS, David, Petra MATĚJKOVÁ, SJ NORRIS and GM WEINSTOCK. Transcriptome of Treponema pallidum: gene expression profiling of treponemes grown in rabbits. In Sborník příspěvků VII. Pracovní setkání biochemiků a molekulárních biologů. 2003rd ed. Brno: Masarykova univerzita, 2003, p. 12. ISBN 80-210-3053-4.
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ŠMAJS, David, Petra MATĚJKOVÁ, SJ NORRIS and GM WEINSTOCK. Transkriptom spirochety Treponema pallidum: úroveň genové exprese během experimentální infekce králíků (Transkriptome of Treponema pallidum: gene expression levels during experimental rabbit infection). In Sborník abstraktů XII. konference mladých mikrobiologů Tomáškovy dny 2003. 2003rd ed. Brno: Lékařská fakulta MU, 2003, p. 14 - 15, 1 pp.
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ŠMAJS, David, M. MCKEVITT, L. WANG, J.K. HOWELL, S.J. NORRIS, T. PALZKILL and G.M. WEINSTOCK. BAC library of T. pallidum DNA in E. coli. Genome Res. 2002, vol. 2002, No 12, p. 515-522.
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ŠMAJS, David, S.E. KARPATHY, Jan ŠMARDA and G.M- WEINSTOCK. Colicins produced by the Escherichia fergusonii strains closely resemble colicins coded by E. coli. FEMS Microbiol. Lett. 2002, vol. 2002, No 208, p. 261-264.
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ŠMAJS, David, S.J. NORRIS and G.M. WEINSTOCK. Construction of Treponema pallidum BAC library for functional and genomic apllications. In: Zhao,S. et al. (eds): Methods in Molecular Biology Series. Bacterial Artificial Chromosomes: Methods and Protocols. Washington, D.C. USA, 2002.
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SVOBODA, Augustin, Miroslav GABRIEL, Roman JANISCH, Marie KOPECKÁ, Iva SLANINOVÁ, David ŠMAJS and Jan ŠMARDA. Praktická cvičení z biologie. Část I. 2.vyd.2. dotisk. Brno: Masarykova univerzita, 2002.
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SVOBODA, Augustin, Miroslav GABRIEL, Roman JANISCH, Marie KOPECKÁ, Iva SLANINOVÁ, David ŠMAJS, Jan ŠMARDA and Renata VESELSKÁ. Praktická cvičení z biologie. Protokoly - část I. In Praktická cvičení z biologie. Protokoly - část I. 2. vydání, dotisk. Brno: Masarykova univerzita v Brně, 2002, 55 pp. Skripta pro posluchače lékařské fakulty. ISBN 80-210-1852-6.
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ŠMARDA, Jan, David ŠMAJS, Jiří KOMRSKA and Vladimír KRZYŽÁNEK. S-layers on cell walls of cyanobacteria. Micron. 2002, vol. 2002, No 33, p. 227-246. ISSN 0968-4328.
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ŠMARDA, Jan, David ŠMAJS and H. LHOTOVA. Three recently acknowledged Escherichia species strikingly differ in the incidence of bacteriocinogenic and lysogenic strains. J. Basic Microbiol. 2002, vol. 2002, No 42, p. 429-433.
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