Publication Records

MAKOVICKÝ, Peter, Edita JEKLOVÁ, Břetislav LIPOVÝ, Filip RAŠKA, Martin KNOZ, Rea JAROSOVA, Šárka KOBZOVÁ, Lukáš VACEK, Adam NOREK and Lubomír JANDA. A scoring system for histological evaluation of skin during Staphylococcus aureus infections. Biologia. New York: Springer, 2024, vol. 79, No 3, p. 917-925. ISSN 0006-3088. Available from: https://dx.doi.org/10.1007/s11756-023-01567-4.

SALMANTON-GARCIA, Jon, Oliver A CORNELY, Jannik STEMLER, Aleksandra BARAC, Joerg STEINMANN, Alena SIVÁKOVÁ, Emin Halis AKALIN, Sevtap ARIKAN-AKDAGLII, Laura LOUGHLINJ, Cristina TOSCANO, Manjusha NARAYANAN, Benedict ROGERS, Birgit WILLINGER, Deniz AKYOL, Emmanuel ROILIDES, Katrien LAGROU, Malgorzata MIKULSKA, Blandine DENIS, Diane PONSCARME, Urlike SCHARMANN, Alpay AZAP, Deborah LOCKHART, Tihana BICANICY, Florian KRON, Nurettin ERBEN, Riina RAUTEMAA-RICHARDSON, Anna L GOODMAN, Carolina GARCIA-VIDAL, Cornelia LASS-FLOERL, Jean-Pierre GANGNEUX, Lucia TARAMASSO, Maite RUIZ, Yael SCHICK, Van Wijngaerden ERIC, Christopher MILACEK, Daniele Roberto GIACOBBE, Clare LOGANY, Emily ROONEY, Andrea GORI, Murat AKOVA, Matteo BASSETTI, Martin HOENIGL and Philipp KOEHLER. Attributable mortality of candidemia – Results from the ECMM Candida III multinational European Observational Cohort Study. JOURNAL OF INFECTION. LONDON: W B SAUNDERS CO LTD, 2024, vol. 89, No 3, p. 1-10. ISSN 0163-4453. Available from: https://dx.doi.org/10.1016/j.jinf.2024.106229.

VRBOVÁ, Eliška, Petra POSPÍŠILOVÁ, Eliška DASTYCHOVÁ, Martina KOJANOVA, Miluse KREIDLOVA, Filip ROB, Vladimír VAŠKŮ, Petra MOSIO, Radim STRNADEL, Olga FAUSTMANNOVA, Ivana KUKLOVA, Monika DVOŘÁKOVÁ HEROLDOVÁ, Hana ZAKOUCKA and David ŠMAJS. Majority of Treponema pallidum ssp. pallidum MLST allelic profiles in the Czech Republic (2004–2022) belong to two SS14-like clusters. Scientific Reports. BERLIN: NATURE RESEARCH, 2024, vol. 14, No 1, p. 1-9. ISSN 2045-2322. Available from: https://dx.doi.org/10.1038/s41598-024-68656-5.

VACEK, Lukáš, Dominika POLAŠTÍK KLEKNEROVÁ, Břetislav LIPOVÝ, Jakub HOLOUBEK, Dominika MATYSKOVÁ, E. CERNA, J. BRTNIKOVA, E. JEKLOVA, S. KOBZOVA, L. JANDA, Lenka LIŠKOVÁ, Daniel DIABELKO, Tibor BOTKA, Roman PANTŮČEK, Filip RŮŽIČKA and L. VOJTOVA. Phage therapy combined with Gum Karaya injectable hydrogels for treatment of methicillin-resistant Staphylococcus aureus deep wound infection in a porcine model. International Journal of Pharmaceutics. AMSTERDAM: ELSEVIER, 2024, vol. 660, July 2024, p. 1-11. ISSN 0378-5173. Available from: https://dx.doi.org/10.1016/j.ijpharm.2024.124348.

JIRASEK, Petr, Alexandr JUSKU, Jana FRANKOVA, Marketa URBANKOVA, Daniel DIABELKO, Filip RŮŽIČKA, Barbora PAPOUSKOVA, Karin CHYTILOVA, Jiri VRBA, Jakub HAVLASEK, Katerina LANGOVA, Jan STORCH, Iva VOBORNA, Vilim SIMANEK and Jan VACEK. Phytocannabinoids and gingival inflammation: Preclinical findings and a placebo-controlled double-blind randomized clinical trial with cannabidiol. JOURNAL OF PERIODONTAL RESEARCH. HOBOKEN: WILEY, 2024, vol. 59, No 3, p. 468-479. ISSN 0022-3484. Available from: https://dx.doi.org/10.1111/jre.13234.

LIPOVÝ, Břetislav, Lukáš VACEK, Dominika POLAŠTÍK KLEKNEROVÁ, Edita JEKLOVA, Lenka LIŠKOVÁ, Jakub HOLOUBEK, Dominika MATYSKOVÁ and Filip RŮŽIČKA. Porcine model of a complicated skin and soft tissue infection caused by Pseudomonas aeruginosa. Veterinarni Medicina. Prague: CZECH ACAD AGRIC SCI, 2024, vol. 69, No 6, p. 191-197. ISSN 0375-8427. Available from: https://dx.doi.org/10.17221/25/2024-VETMED.

PAVELKA, Antonín, Lukáš VACEK, Adam NOREK, Šárka KOBZOVÁ and Lubomír JANDA. Recombinant production of human antimicrobial peptide LL- 37 and its secondary structure. Biologia. Springer, 2024, vol. 79, No 1, p. 263-273. ISSN 0006-3088. Available from: https://dx.doi.org/10.1007/s11756-023-01539-8.

DRÁPALOVÁ, Eva, Lenka MICHLOVSKÁ, Hana POŠTULKOVÁ, Ivana CHAMRADOVÁ, Břetislav LIPOVÝ, Jakub HOLOUBEK, Lukáš VACEK, Filip RŮŽIČKA, Markéta HANSLIANOVÁ, Táňa FIDLEROVÁ, Eva ČERNÁ, Barbara HRDLIČKOVÁ and Lucy VOJTOVÁ. Antimicrobial Cost-Effective Transparent Hydrogel Films from Renewable Gum Karaya/Chitosan Polysaccharides for Modern Wound Dressings. ACS Applied Polymer Materials. WASHINGTON: AMER CHEMICAL SOC, 2023, vol. 5, No 4, p. 2774-2786. ISSN 2637-6105. Available from: https://dx.doi.org/10.1021/acsapm.3c00025.

VACEK, Lukáš, Michaela KOUŘILOVÁ, Šárka KOBZOVÁ and Lubomír JANDA. Antimicrobial effect of endolysins LYSDERM‐S and LYSDERM‐T1 and endolysin‐ubiquitin combination on methicillin‐resistant Staphylococcus aureus. BIOLOGIA. NEW YORK: SPRINGER, 2023, vol. 78, No 2, p. 601-608. ISSN 0006-3088. Available from: https://dx.doi.org/10.1007/s11756-022-01282-6.

MARIE, Koch Stella, Carsten FREIDANK-POHL, Siontas OLIVER, Cortesao MARTA, Mota AFONSO, Runzheimer KATHARINA, Jung SASCHA, Katarína REBROŠOVÁ, Martin SILER, Moeller RALF and Meyer VERA. Aspergillus niger as a cell factory for the production of pyomelanin, a molecule with UV-C radiation shielding activity. FRONTIERS IN MICROBIOLOGY. LAUSANNE: FRONTIERS MEDIA SA, 2023, vol. 14, July 2023, p. 1-15. ISSN 1664-302X. Available from: https://dx.doi.org/10.3389/fmicb.2023.1233740.

ARENDRUP, Maiken Cavling, Sevtap ARIKAN-AKDAGLI, Karin Meinike JORGENSEN, Aleksandra BARAC, Jorg STEINMANN, Cristina TOSCANO, Valentina Arsic ARSENIJEVIC, Assunta SARTOR, Cornelia LASS-FLOERL, Axel HAMPRECHT, Tadeja MATOS, Benedict R S ROGERS, Inmaculada QUILES, Jochem BUIL, Volkan OZENCI, Robert KRAUSE, Matteo BASSETTI, Laura LOUGHLIN, Blandine DENIS, Anna GRANCINI, P Lewis WHITE, Katrien LAGROU, Birgit WILLINGER, Riina RAUTEMAA-RICHARDSON, Petr HAMAL, Beyza ENER, Tugce UNALAN-ALTINTOP, Ebru EVREN, Suleyha HILMIOGLU-POLAT, Yasemin OZ, Ozlem Koyuncu OZYURT, Faruk AYDIN, Filip RŮŽIČKA, Eelco F J MEIJER, Jean Pierre GANGNEUX, Deborah E A LOCKHART, Nina KHANNA, Clare LOGAN, Ulrike SCHARMANN, Guillaume DESOUBEAUX, Emmanuel ROILIDES, Alida Fe TALENTO, van Dijk KARIN, Philipp KOEHLER, Jon SALMANTON-GARCIA, Oliver A CORNELY and Martin HOENIGL. European candidaemia is characterised by notable differential epidemiology and susceptibility pattern: Results from the ECMM<i> Candida</i> III study. JOURNAL OF INFECTION. LONDON: W B SAUNDERS CO LTD, 2023, vol. 87, No 5, p. 428-437. ISSN 0163-4453. Available from: https://dx.doi.org/10.1016/j.jinf.2023.08.001.

ŽAJDLÍKOVÁ, Veronika, Veronika FARKOVÁ, Jiří KUČERA, Kateřina DADÁKOVÁ, Martina ZAPLETALOVÁ, Kateřina PAŠKOVÁ, Roman ŘEMÍNEK, Zdeněk GLATZ, Lydie IZAKOVIČOVÁ HOLLÁ, Filip RŮŽIČKA, Jan LOCHMAN and Petra BOŘILOVÁ LINHARTOVÁ. Gene expression and metabolic activity of Streptococcus mutans during exposure to dietary carbohydrates glucose, sucrose, lactose, and xylitol. Molecular Oral Microbiology. Hoboken: Wiley, 2023, vol. 38, No 5, p. 424-441. ISSN 2041-1006. Available from: https://dx.doi.org/10.1111/omi.12428.

HOENIGL, Martin, Jon SALMANTON-GARCÍA, Matthias EGGER, Gangneux JEAN-PIERRE, Tihana BICANIC, Sevtap ARIKAN-AKDAGLI, Ana ALASTRUEY-IZQUIERDO, Nikolai KLIMKO, Aleksandra BARAC, Volkan ÖZENCI, Eelco F J MEIJER, Nina KHANNA, Matteo BASSETTI, Riina RAUTEMAA-RICHARDSON, Katrien LAGROU, Adam KAI-MANUEL, Emin Halis AKALIN, Murat AKOVA, Valentina Arsic ARSENIJEVIC, Avinash AUJAYEB, Ola BLENNOW, Stéphane BRETAGNE, François DANION, Blandine DENIS, Nick Alexander de JONGE, Guillaume DESOUBEAUX, Lubos DRGONA, Nurettin ERBEN, Andrea GORI, Julio García RODRÍGUEZ, Carolina GARCIA-VIDAL, Daniele Roberto GIACOBBE, Anna L GOODMAN, Petr HAMAL, Helena HAMMARSTRÖM, Cristina TOSCANO, Fanny LANTERNIER, Cornelia LASS-FLÖRL, Deborah E A LOCKHART, Thomas LONGVAL, Laura LOUGHLIN, Tadeja MATOS, Malgorzata MIKULSKA, Manjusha NARAYANAN, Sonia MARTÍN-PÉREZ, Juergen PRATTES, Benedict ROGERS, Laman RAHIMLI, Maite RUIZ, Emmanuel ROILIDES, Michael SAMARKOS, Ulrike SCHARMANN, Uluhan SILI, Oguz Resat SIPAHI, Alena SIVÁKOVÁ, Joerg STEINMANN, Janina TRAUTH, Ozge TURHAN, Jens Van PRAET, Antonio VENA, P Lewis WHITE, Birgit WILLINGER, Anna Maria TORTORANO, Maiken C ARENDRUP, Philipp KOEHLER and Oliver A CORNELY. Guideline adherence and survival of patients with candidaemia in Europe: results from the ECMM Candida III multinational European observational cohort study. The Lancet Infectious Diseases. OXFORD: ELSEVIER SCI LTD, 2023, vol. 23, No 6, p. 751-761. ISSN 1473-3099. Available from: https://dx.doi.org/10.1016/S1473-3099(22)00872-6.

KATHARINA, Siems, Runzheimer KATHARINA, Katarína REBROŠOVÁ, Etzbach LARA, Auerhammer ALINA, Rehm ANNA, Schwengers OLIVER, Martin ŠILER, Ota SAMEK, Filip RŮŽIČKA and Moeller RALF. Identification of staphyloxanthin and derivates in yellow-pigmented Staphylococcus capitis subsp. capitis. Frontiers in Microbiology. LAUSANNE: FRONTIERS MEDIA SA, 2023, vol. 14, September 2023, p. 1-12. ISSN 1664-302X. Available from: https://dx.doi.org/10.3389/fmicb.2023.1272734.

REBROŠOVÁ, Katarína, Silvie BERNATOVÁ, Martin ŠILER, Jan MAŠEK, Ota SAMEK, Jan JEŽEK, Martin KIZOVSKY, Veronika HOLÁ, Pavel ZEMÁNEK and Filip RŮŽIČKA. Rapid Identification of Pathogens Causing Bloodstream Infections by Raman Spectroscopy and Raman Tweezers. Microbiology Spectrum. WASHINGTON: American Society for Microbiology, 2023, vol. 11, No 3, p. 1-15. ISSN 2165-0497. Available from: https://dx.doi.org/10.1128/spectrum.00028-23.

VACULÍK, Ondřej, Silvie BERNATOVÁ, Katarína REBROŠOVÁ, Ota SAMEK, Lukáš ŠILHAN, Filip RŮŽIČKA, Mojmír ŠERÝ, Martin ŠILER, Jan JEŽEK and Pavel ZEMÁNEK. Rapid identification of pathogens in blood serum via Raman tweezers in combination with advanced processing methods. Biomedical Optics Express. WASHINGTON: OPTICA PUBLISHING GROUP, 2023, vol. 14, No 12, p. 6410-6421. ISSN 2156-7085. Available from: https://dx.doi.org/10.1364/BOE.503628.

BENEŠOVÁ, M., S. BERNATOVÁ, F. MIKA, Z. POKORNÁ, J. JEŽEK, M. ŠILER, O. SAMEK, Filip RŮŽIČKA, Katarína REBROŠOVÁ, P. ZEMÁNEK and Z. PILÁT. SERS-Tags: Selective Immobilization and Detection of Bacteria by Strain-Specific Antibodies and Surface-Enhanced Raman Scattering. Biosensors. Basel: MDPI, 2023, vol. 13, No 2, p. 1-14. ISSN 2079-6374. Available from: https://dx.doi.org/10.3390/bios13020182.

CVANOVÁ, Michaela, Filip RŮŽIČKA, Martina KUKLETOVÁ, Břetislav LIPOVÝ, Daniela GACHOVÁ, Lydie IZAKOVIČOVÁ HOLLÁ, Zdeněk DANĚK, Veronika HOLÁ, Michaela BARTOŠOVÁ, Jiří JARKOVSKÝ, Ladislav DUŠEK and Petra BOŘILOVÁ LINHARTOVÁ. Candida species and selected behavioral factors co-associated with severe early childhood caries: Case-control study. Frontiers in Cellular and Infection Microbiology. Lausanne: Frontiers, 2022, vol. 12, July 2022, p. 1-15. ISSN 2235-2988. Available from: https://dx.doi.org/10.3389/fcimb.2022.943480.

HORKÁ, Marie, Filip RŮŽIČKA, Alena SIVÁKOVÁ, Pavel KARÁSEK, Jiří ŠALPLACHTA, Roman PANTŮČEK and Michal ROTH. Capillary electrophoretic methods for classification of methicillin-resistant Staphylococcus aureus (MRSA) clones. Analytica Chimica Acta. Amsterdam, Netherlands: Elsevier, 2022, vol. 1227, September, p. 1-7. ISSN 0003-2670. Available from: https://dx.doi.org/10.1016/j.aca.2022.340305.

HORKA, Marie, Filip RŮŽIČKA, Pavel KARASEK, Jiri SALPLACHTA, Alena SIVÁKOVÁ and Michal ROTH. Classification of clinical Cutibacterium acnes isolates at phylotype level by capillary electrophoretic methods in roughened fused silica capillary. Talanta. AMSTERDAM: Elsevier, 2022, vol. 247, September 2022, p. 1-7. ISSN 0039-9140. Available from: https://dx.doi.org/10.1016/j.talanta.2022.123565.

MARINČÁK VRANKOVÁ, Zuzana, Margarita ROUSI, Michaela CVANOVÁ, Daniela GACHOVÁ, Filip RŮŽIČKA, Veronika HOLÁ, Jan LOCHMAN, Lydie IZAKOVIČOVÁ HOLLÁ, Alena BRYŠOVÁ and Petra BOŘILOVÁ LINHARTOVÁ. Effect of fixed orthodontic appliances on gingival status and oral microbiota: a pilot study. BMC Oral Health. London: BMC, 2022, vol. 22, No 1, p. 1-12. ISSN 1472-6831. Available from: https://dx.doi.org/10.1186/s12903-022-02511-9.

FURMANCIKOVA, Petra, Zora STASTKOVA, Pavlina NAVRATILOVA, Ivana BEDNAROVA and Milada DVOŘÁČKOVÁ. Prevalence and detection of Helicobacter pylori in raw cows' and goats' milk in selected farms in the Czech Republic. Journal of Food and Nutrition Research. Bratislava: VUP FOOD RESEARCH INST, 2022, vol. 61, No 2, p. 192-197. ISSN 1336-8672.

RAŠKA, Filip, Břetislav LIPOVÝ, Jakub HOLOUBEK, Š. KOBZOVÁ, Lukáš VACEK, L. VOJTOVÁ and L. JANDA. Promising effect of topical antimicrobial ‘biobetters’ against methicillin-resistant Staphylococcus aureus strains. Burns. OXON: ELSEVIER SCI LTD, 2022, vol. 48, No 7, p. 1770-1772. ISSN 0305-4179. Available from: https://dx.doi.org/10.1016/j.burns.2022.08.011.

SNOPKOVÁ, Kateřina, Kristýna DUFKOVÁ, Ivo CHAMRÁD, René LENOBEL, Darina ČEJKOVÁ, Marcel KOSINA, Matěj HRALA, Veronika HOLÁ, Ivo SEDLÁČEK and David ŠMAJS. Pyocin-mediated antagonistic interactions in Pseudomonas spp. isolated in James Ross Island, Antarctica. ENVIRONMENTAL MICROBIOLOGY. HOBOKEN: WILEY, 2022, vol. 24, No 3, p. 1294-1307. ISSN 1462-2912. Available from: https://dx.doi.org/10.1111/1462-2920.15809.

REBROŠOVÁ, Katarína, Ota SAMEK, Martin KIZOVSKY, Silvie BERNATOVA, Veronika HOLÁ and Filip RŮŽIČKA. Raman Spectroscopy - A Novel Method for Identification and Characterization of Microbes on a Single-Cell Level in Clinical Settings. Frontiers in Cellular and Infection Microbiology. Lausanne: Frontiers, 2022, vol. 12, April 2022, p. 1-10. ISSN 2235-2988. Available from: https://dx.doi.org/10.3389/fcimb.2022.866463.

REBROŠOVÁ, Katarína, Silvie BERNATOVÁ, Martin ŠILER, Magdalena UHLIROVA, Ota SAMEK, Jan JEŽEK, Veronika HOLÁ, Filip RŮŽIČKA and Pavel ZEMANEK. Raman spectroscopy - a tool for rapid differentiation among microbes causing urinary tract infections. Analytica Chimica Acta. Amsterdam: Elsevier, 2022, vol. 1191, January 2022, p. 1-10. ISSN 0003-2670. Available from: https://dx.doi.org/10.1016/j.aca.2021.339292.

KOTÁSKOVÁ, Iva, Vít SYROVÁTKA, Hana OBRUČOVÁ, Petra VÍDEŇSKÁ, Barbora ZWINSOVÁ, Veronika HOLÁ, Eva BLAŠTÍKOVÁ, Filip RŮŽIČKA and Tomáš FREIBERGER. Actinotignum schaalii: Relation to Concomitants and Connection to Patients’ Conditions in Polymicrobial Biofilms of Urinary Tract Catheters and Urines. Microorganisms. Basel: MDPI, 2021, vol. 9, No 3, p. 1-23. ISSN 2076-2607. Available from: https://dx.doi.org/10.3390/microorganisms9030669.

HORKÁ, Marie, Pavel KARÁSEK, Michal ROTH, Dana ŠTVERÁKOVÁ, Jiří ŠALPLACHTA, Filip RŮŽIČKA and Roman PANTŮČEK. Bacteriophage replication on permissive host cells in fused silica capillary with nanostructured part as potential of electrophoretic methods for developing phage applications. Talanta. Amsterdam: Elsevier, 2021, vol. 224, March 2021, p. "121800-1"-"121800-8", 8 pp. ISSN 0039-9140. Available from: https://dx.doi.org/10.1016/j.talanta.2020.121800.

KOBZOVÁ, Šárka, Lukáš VACEK, Břetislav LIPOVÝ, Markéta HANSLIANOVÁ, Lucy VOJTOVÁ and Lubomír JANDA. Enzymová léčba infekcí kůže a měkkých tkání (Enzyme-based treatment of skin and soft tissue infections). Epidemiologie, mikrobiologie, imunologie. PRAGUE: CESKA LEKARSKA SPOLECNOST J EV PURKYNE, 2021, vol. 70, No 1, p. 52-61. ISSN 1210-7913.

KELAR TUČEKOVÁ, Zlata, Lukáš VACEK, Richard KRUMPOLEC, Jakub KELAR, Miroslav ZEMÁNEK, Mirko ČERNÁK and Filip RŮŽIČKA. Multi-Hollow Surface Dielectric Barrier Discharge for Bacterial Biofilm Decontamination. Molecules. Basel: MDPI, 2021, vol. 26, No 4, p. "910", 13 pp. ISSN 1420-3049. Available from: https://dx.doi.org/10.3390/molecules26040910.

CAPOOR, M. N., Anna KONIECZNA, A. MCDOWELL, Filip RŮŽIČKA, Martin SMRČKA, Radim JANČÁLEK, Karel MÁCA, Michael LUJC, Fatima AHMED, C. BIRKENMAIER, S. DUDLI and Ondřej SLABÝ. Pro-Inflammatory and Neurotrophic Factor Responses of Cells Derived from Degenerative Human Intervertebral Discs to the Opportunistic Pathogen Cutibacterium acnes. International Journal of Molecular Sciences. Basel: MDPI, 2021, vol. 22, No 5, p. 1-16. ISSN 1422-0067. Available from: https://dx.doi.org/10.3390/ijms22052347.

BERNATOVA, S., Katarína REBROŠOVÁ, Z. PILAT, M. SERY, A. GJEVIK, O. SAMEK, J. JEZEK, M. SILER, M. KIZOVSKY, T. KLEMENTOVA, Veronika HOLÁ, Filip RŮŽIČKA and P. ZEMANEK. Rapid detection of antibiotic sensitivity of Staphylococcus aureus by Raman tweezers. European Physical Journal Plus. HEIDELBERG: SPRINGER HEIDELBERG, 2021, vol. 136, No 2, p. 1-10. ISSN 2190-5444. Available from: https://dx.doi.org/10.1140/epjp/s13360-021-01152-1.

GRILLOVÁ, Linda, Jana MUSILOVA, Klára JANEČKOVÁ, Petra POSPÍŠILOVÁ, Ivana KUKLOVA, Vladana WOZNICOVÁ, Hana ZAKOUCKA and David ŠMAJS. The Arg753Gln Polymorphism of Toll-Like Receptor 2 Has a Lower Occurrence in Patients with Syphilis, Suggesting Its Protective Effect in Czech and Slovak Individuals. INFECTION AND IMMUNITY. WASHINGTON: American Society for Microbiology, 2021, vol. 89, No 1, p. 1-6. ISSN 0019-9567. Available from: https://dx.doi.org/10.1128/IAI.00503-20.

TKADLEC, Jan, Vaclav CAPEK, Marie BRAJEROVA, Eva SMELIKOVA, Oto MELTER, Tamara BERGEROVA, Sylvia POLIVKOVA, Magda BALEJOVA, Marketa HANSLIANOVA, Daniela FACKOVA, Katerina NERADOVA, Renata TEJKALOVÁ, Iva VAGNEROVA, Natasa BARTONIKOVA, Eva CHMELAROVA, Pavel DREVINEK and Marcela KRUTOVA. The molecular epidemiology of methicillin-resistant Staphylococcus aureus (MRSA) in the Czech Republic. Journal of Antimicrobial Chemotherapy. OXFORD: Oxford University Press, 2021, vol. 76, No 1, p. 55-64. ISSN 0305-7453. Available from: https://dx.doi.org/10.1093/jac/dkaa404.

VRBOVÁ, Eliška, Lenka MIKALOVÁ, Linda GRILLOVÁ, Petra POSPÍŠILOVÁ, Radim STRNADEL, Eliška DASTYCHOVÁ, Martina KOJANOVA, Miluse KREIDLOVA, Daniela VANOUSOVA, Filip ROB, Premysl PROCHAZKA, Alena KRCHŇÁKOVÁ, Vladimír VAŠKŮ, Vladana WOZNICOVÁ, Monika DVOŘÁKOVÁ HEROLDOVÁ, Ivana KUKLOVA, Hana ZAKOUCKA and David ŠMAJS. A retrospective study on nested PCR detection of syphilis treponemes in clinical samples: PCR detection contributes to the diagnosis of syphilis in patients with seronegative and serodiscrepant results. Plos one. San Francisco: Public Library of Science, 2020, vol. 15, No 8, p. 1-11. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0237949.

PILAT, Zdenek, Alexandr JONAS, Jana PILATOVA, Tereza KLEMENTOVA, Silvie BERNATOVA, Martin SILER, Tadeas MANKA, Martin KIZOVSKY, Filip RŮŽIČKA, Roman PANTŮČEK, Ute NEUGEBAUER, Ota SAMEK and Pavel ZEMANEK. Analysis of Bacteriophage-Host Interaction by Raman Tweezers. Analytical chemistry. Washington: American Chemical Society, 2020, vol. 92, No 18, p. 12304-12311. ISSN 0003-2700. Available from: https://dx.doi.org/10.1021/acs.analchem.0c01963.

VACEK, Lukáš, Šárka KOBZOVÁ, Richard ČMELÍK, Roman PANTŮČEK and Lubomír JANDA. Enzybiotics LYSSTAPH-S and LYSDERM-S as Potential Therapeutic Agents for Chronic MRSA Wound Infections. Antibiotics. Basel: MDPI, 2020, vol. 9, No 8, p. "519-1"-"519-16", 16 pp. ISSN 2079-6382. Available from: https://dx.doi.org/10.3390/antibiotics9080519.

SALPLACHTA, Jiri, Marie HORKA, Pavel KARASEK, Filip RŮŽIČKA and Michal ROTH. Identification of Aspergillus Conidia in Bronchoalveolar Lavage Using Offline Combination of Capillary Electrophoresis in Supercritical Water-Treated Fused Silica Capillary and Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry. Analytical chemistry. WASHINGTON: AMER CHEMICAL SOC, 2020, vol. 92, No 11, p. 7588-7595. ISSN 0003-2700. Available from: https://dx.doi.org/10.1021/acs.analchem.0c00165.

DVOŘÁČKOVÁ, Milada, Filip RŮŽIČKA, Monika DVOŘÁKOVÁ HEROLDOVÁ, Lukáš VACEK, Dana BEZDĚKOVÁ, Martin BENEŠÍK, Petr PETRÁŠ and Roman PANTŮČEK. Možnosti terapeutického ovlivnění stafylokokových infekcí prostřednictvím bakteriofágů a vybrané metody testování citlivosti stafylokoků in vitro (Therapeutic potential of bacteriophages for staphylococcal infections and selected methods for in vitro susceptibility testing of staphylococci). Epidemiologie, mikrobiologie, imunologie. Praha: Mladá fronta a.s., 2020, vol. 69, No 1, p. 10-18. ISSN 1210-7913.

HORKÁ, Marie, Pavel KARÁSEK, Jiří ŠALPLACHTA, Filip RŮŽIČKA, Dana ŠTVERÁKOVÁ, Roman PANTŮČEK and Michal ROTH. Nano-etched fused-silica capillary used for on-line preconcentration and electrophoretic separation of bacteriophages from large blood sample volumes with off-line MALDI-TOF mass spectrometry identification. Microchimica Acta. Vienna: Springer, 2020, vol. 187, No 3, p. "177-1"-"177-9", 9 pp. ISSN 0026-3672. Available from: https://dx.doi.org/10.1007/s00604-020-4154-6.

HORKA, Marie, Jiri SALPLACHTA, Pavel KARASEK, Filip RŮŽIČKA and Michal ROTH. Online Concentration of Bacteria from Tens of Microliter Sample Volumes in Roughened Fused Silica Capillary with Subsequent Analysis by Capillary Electrophoresis and Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry. ACS INFECTIOUS DISEASES. WASHINGTON: AMER CHEMICAL SOC, 2020, vol. 6, No 3, p. 355-365. ISSN 2373-8227. Available from: https://dx.doi.org/10.1021/acsinfecdis.9b00200.

SNOPKOVÁ, Kateřina, Kristýna DUFKOVÁ, Petra KLIMEŠOVÁ, Martina VANĚRKOVÁ, Filip RŮŽIČKA and Veronika HOLÁ. Prevalence of bacteriocins and their co-association with virulence factors within Pseudomonas aeruginosa catheter isolates. International Journal of Medical Microbiology. Munich: Elsevier, 2020, vol. 310, No 8, p. 1-7. ISSN 1438-4221. Available from: https://dx.doi.org/10.1016/j.ijmm.2020.151454.

HORKÁ, Marie, Jiri ŠALPLACHTA, Pavel KARÁSEK, Filip RŮŽIČKA, Dana ŠTVERÁKOVÁ, Roman PANTŮČEK and Michal ROTH. Rapid Isolation, Propagation, and Online Analysis of a Small Number of Therapeutic Staphylococcal Bacteriophages from a Complex Matrix. ACS Infectious Diseases. Washington, D.C.: American Chemical Society, 2020, vol. 6, No 10, p. 2745-2755. ISSN 2373-8227. Available from: https://dx.doi.org/10.1021/acsinfecdis.0c00358.

KRUTOVA, Marcela, Vaclav CAPEK, Elka NYCOVA, Sabina VOJACKOVA, Magda BALEJOVA, Lenka GEIGEROVA, Renata TEJKALOVÁ, Lenka HAVLINOVA, Iva VAGNEROVA, Pavel CERMAK, Lenka RYSKOVA, Petr JEZEK, Dana ZAMAZALOVA, Denisa VESELA, Alice KUCHAROVA, Dana NEMCOVA, Martina CURDOVA, Otakar NYC and Pavel DREVINEK. The association of a reduced susceptibility to moxifloxacin in causativeClostridium(Clostridioides)difficilestrain with the clinical outcome of patients. ANTIMICROBIAL RESISTANCE AND INFECTION CONTROL. LONDON: BMC, 2020, vol. 9, No 1, p. 1-7. ISSN 2047-2994. Available from: https://dx.doi.org/10.1186/s13756-020-00765-y.

CAPOOR, Manu, C. BIRKENMAIER, J.C. WANG, A. MCDOWELL, F.S. AHMED, H. BRGGEMANN, E. COSCIA, D.G. DAVIES, S. OHRT-NISSEN, A. RAZ, Filip RŮŽIČKA, J.E. SCHMITZ, V.A. FISCHETTI and Ondřej SLABÝ. A review of microscopy-based evidence for the association of Propionibacterium acnes biofilms in degenerative disc disease and other diseased human tissue. European Spine Journal. NEW YORK: Springer, 2019, vol. 28, No 12, p. 2951-2971. ISSN 0940-6719. Available from: https://dx.doi.org/10.1007/s00586-019-06086-y.

DVOŘÁČKOVÁ, Milada, Filip RŮŽIČKA, Martin BENEŠÍK, Roman PANTŮČEK and Monika DVOŘÁKOVÁ HEROLDOVÁ. Antimicrobial effect of commercial phage preparation Stafal (R) on biofilm and planktonic forms of methicillin-resistant Staphylococcus aureus. Folia microbiologica. Dordrecht: Springer, 2019, vol. 64, No 1, p. 121-126. ISSN 0015-5632. Available from: https://dx.doi.org/10.1007/s12223-018-0622-3.

KOTÁSKOVÁ, Iva, Hana OBRUČOVÁ, Veronika LÝČKOVÁ, Filip RŮŽIČKA and Tomáš FREIBERGER. Capability of Fluorescent Capillary Electrophoresis To Distinguish Species of the Candida parapsilosis Complex. Journal of Clinical Microbiology. Washington: American Society for Microbiology, 2019, vol. 57, No 5, p. 1-3. ISSN 0095-1137. Available from: https://dx.doi.org/10.1128/JCM.00135-19.

MOUTELÍKOVÁ, Romana, Pavel SAUER, Monika DVOŘÁKOVÁ HEROLDOVÁ, Veronika HOLÁ and Jana PRODĚLALOVÁ. Emergence of Rare Bovine-Human Reassortant DS-1-Like Rotavirus A Strains with G8P[8] Genotype in Human Patients in the Czech Republic. VIRUSES-BASEL. BASEL: MDPI AG, 2019, vol. 11, No 11, p. 1-14. ISSN 1999-4915. Available from: https://dx.doi.org/10.3390/v11111015.

OBRUCOVA, H., Iva KOTÁSKOVÁ, R. TIHELKOVA, Veronika HOLÁ, Filip RŮŽIČKA and Tomáš FREIBERGER. Fluorescent Capillary Electrophoresis Is Superior to Culture in Detecting Candida Species from Samples of Urinary Catheters and Ureteral Stents with Mono- or Polyfungal Biofilm Growth. Journal of Clinical Microbiology. Washington: American Society for Microbiology, 2019, vol. 57, No 4, p. nestrankovano, 10 pp. ISSN 0095-1137. Available from: https://dx.doi.org/10.1128/JCM.01861-18.

REBROŠOVÁ, Katarína, Martin ŠILER, Ota SAMEK, Filip RŮŽIČKA, Silvie BERNATOVÁ, Jan JEŽEK, Pavel ZEMÁNEK and Veronika HOLÁ. Identification of ability to form biofilm in Candida parapsilosis and Staphylococcus epidermidis by Raman spectroscopy. FUTURE MICROBIOLOGY. LONDON: FUTURE MEDICINE LTD, 2019, vol. 14, No 6, p. 509-518. ISSN 1746-0913. Available from: https://dx.doi.org/10.2217/fmb-2018-0297.

CAPOOR, Manu, Jan LOCHMAN, Andrew MCDOWELL, Jonathan E. SCHMITZ, Martin SOLANSKÝ, Martina ZAPLETALOVÁ, Todd F. ALAMIN, Michael F. COSCIA, Steven R. GARFIN, Radim JANČÁLEK, Filip RŮŽIČKA, Nick A. SHAMIE, Martin SMRČKA, Jeffrey C. WANG, Christof BIRKENMAIER and Ondřej SLABÝ. Intervertebral disc penetration by antibiotics used prophylactically in spinal surgery: implications for the current standards and treatment of disc infections. European Spine Journal. NEW YORK: Springer, 2019, vol. 28, No 4, p. 783-791. ISSN 0940-6719. Available from: https://dx.doi.org/10.1007/s00586-018-5838-z.

VRBOVÁ, Eliška, Linda GRILLOVÁ, Lenka MIKALOVÁ, Petra POSPÍŠILOVÁ, Radim STRNADEL, Eliška DASTYCHOVÁ, Martina KOJANOVA, Miluse KREIDLOVA, Daniela VANOUSOVA, Filip ROB, Premysl PROCHAZKA, Alena KRCHŇÁKOVÁ, Vladimír VAŠKŮ, Vladana WOZNICOVÁ, Monika DVOŘÁKOVÁ HEROLDOVÁ, Ivana KUKLOVA, Hana ZAKOUCKA and David ŠMAJS. MLST typing of Treponema pallidum subsp. pallidum in the Czech Republic during 2004-2017: Clinical isolates belonged to 25 allelic profiles and harbored 8 novel allelic variants. Plos one. San Francisco: Public Library of Science, 2019, vol. 14, No 5, p. 1-15. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0217611.

KOTÁSKOVÁ, Iva, Hana OBRUČOVÁ, Barbora MALIŠOVÁ, Petra VÍDEŇSKÁ, Barbora ZWINSOVÁ, Tereza PEROUTKOVÁ, Milada DVOŘÁČKOVÁ, Petr KUMSTÁT, Pavel TROJAN, Filip RŮŽIČKA, Veronika HOLÁ and Tomáš FREIBERGER. Molecular Techniques Complement Culture-Based Assessment of Bacteria Composition in Mixed Biofilms of Urinary Tract Catheter-Related Samples. Frontiers in Microbiology. Lausanne: Frontiers Media SA, 2019, vol. 10, No 462, p. 1-15. ISSN 1664-302X. Available from: https://dx.doi.org/10.3389/fmicb.2019.00462.

HORKA, Marie, Jiri SALPLACHTA, Filip RŮŽIČKA and Karel SLAIS. Utilization of Red Nonionogenic Tenside Labeling, Isoelectric Focusing, and Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry in the Identification of Uropathogens in the Presence of a High Level of Albumin. ACS INFECTIOUS DISEASES. WASHINGTON: AMER CHEMICAL SOC, 2019, vol. 5, No 8, p. 1348-1356. ISSN 2373-8227. Available from: https://dx.doi.org/10.1021/acsinfecdis.9b00045.

LIPOVÝ, Břetislav, Jakub HOLOUBEK, Lukáš VACEK, Filip RŮŽIČKA, E. NEDOMOVA, H. POŠTULKOVÁ and L. VOJTOVÁ. Antimicrobial effect of novel hydrogel matrix based on natural polysaccharide Sterculia urens. Čs. epidemiologie, mikrobiologie, imunologie. Praha: ČSL JEP, 2018, vol. 67, No 4, p. 166-174. ISSN 1210-7913.

PROCHAZKA, David, Martin MAZURA, Ota SAMEK, Katarína REBROŠOVÁ, Pavel PORIZKA, J. KLUS, Petra PROCHAZKOVÁ, J. NOVOTNY, Karel NOVOTNÝ and J. KAISER. Combination of laser-induced breakdown spectroscopy and Raman spectroscopy for multivariate classification of bacteria. Spectrochimica Acta, Part B: Atomic Spectroscopy. Oxford: PERGAMON-ELSEVIER SCIENCE LTD, 2018, vol. 139, JAN 2018, p. 6-12. ISSN 0584-8547. Available from: https://dx.doi.org/10.1016/j.sab.2017.11.004.

HORKÁ, Marie, Dana ŠTVERÁKOVÁ, Jiří ŠALPLACHTA, Karel ŠLAIS, Marta ŠIBOROVÁ, Filip RŮŽIČKA and Roman PANTŮČEK. Electrophoretic techniques for purification, separation and detection of Kayvirus with subsequent control by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry and microbiological methods. Journal of Chromatography A. Amsterdam, Netherlands: Elsevier, 2018, vol. 1570, OCT, p. 155-163. ISSN 0021-9673. Available from: https://dx.doi.org/10.1016/j.chroma.2018.07.078.

MOUTELIKOVA, R., Monika DVOŘÁKOVÁ HEROLDOVÁ, Veronika HOLÁ, P. SAUER and J. PRODELALOVA. Human rotavirus A detection: Comparison of enzymatic immunoassay and rapid chromatographic test with two quantitative RT-PCR assays. Epidemiologie, mikrobiologie, imunologie. Praha: Česká lékařská společnost Jana Evangelisty Purkyně, 2018, vol. 67, No 3, p. 110-113. ISSN 1210-7913.

SALPLACHTA, Jiri, Marie HORKA, Filip RŮŽIČKA and Karel SLAIS. Identification of bacterial uropathogens by preparative isoelectric focusing and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Journal of Chromatography A. Amsterdam, Netherlands: Elsevier, 2018, vol. 1532, JAN 12 2018, p. 232-237. ISSN 0021-9673. Available from: https://dx.doi.org/10.1016/j.chroma.2017.11.072.

CAPOOR, Manu, Filip RŮŽIČKA, Gurpreet SANDHU, Jess ROLLASON, Konstantinos MAVROMMATIS, externista FAHAD AHMED, Jonathan E. SCHMITZ, Assaf RAZ, Holger BRUGGEMANN, Peter A. LAMBERT, Vincent A. FISCHETTI and Ondřej SLABÝ. Importance of Propionibacterium acnes hemolytic activity in human intervertebral discs: A microbiological study. Plos one. San Francisco: Public Library of Science, 2018, vol. 13, No 11, p. 1-10. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0208144.

HRUBANOVA, Kamila, Vladislav KRZYZANEK, Jana NEBESAROVA, Filip RŮŽIČKA, Zdenek PILAT and Ota SAMEK. Monitoring Candida parapsilosis and Staphylococcus epidermidis Biofilms by a Combination of Scanning Electron Microscopy and Raman Spectroscopy. Sensors. Basel: MDPI AG, 2018, vol. 18, No 12, p. 1-19. ISSN 1424-8220. Available from: https://dx.doi.org/10.3390/s18124089.

HORKÁ, M., P. KARÁSEK, M. ROTH and Filip RŮŽIČKA. Pre-concentration and separation of bacteria by volume coupling electrophoresis on supercritical water-etched fused silica capillary with two segments of different internal diameters and inner surface roughnesses. Analytical and Bioanalytical Chemistry. Heidelberg: Springer Heidelberg, 2018, vol. 410, No 1, p. 167-175. ISSN 1618-2642. Available from: https://dx.doi.org/10.1007/s00216-017-0706-y.

HORKÁ, Marie, Jiří ŠALPLACHTA, Filip RŮŽIČKA and Karel ŠLAIS. Preparative and capillary isoelectric focusing for detection and identification of Aspergillus conidia in complex sample matrices. Journal of Separation Science. Germany: WILEY-V C H VERLAG GMBH, 2018, vol. 41, No 22, p. 1-10. ISSN 1615-9306. Available from: https://dx.doi.org/10.1002/jssc.201800547.

HRUBANOVA, Kamila, Jana NEBESAROVA, Filip RŮŽIČKA and Vladislav KRZYZANEK. The innovation of cryo-SEM freeze-fracturing methodology demonstrated on high pressure frozen biofilm. Micron. OXFORD: PERGAMON-ELSEVIER SCIENCE LTD, 2018, vol. 110, JUL 2018, p. 28-35. ISSN 0968-4328. Available from: https://dx.doi.org/10.1016/j.micron.2018.04.006.