In this thesis I study relation between hypoxia and histone H3 citrullination in neutrophilic granulocytes. Neutrophils are innate immune cells and they often perform their effector functions in hypoxic environment, such as a site of inflammation. Histone citrullination is an important epigenetic modification and it occurs at histone H3 in the greatest extent. In the case of neutrophils, citrullination is mostly associated with the process of NETosis, which is an important neutrophil killing mechanism. For the study of the effect of hypoxia, the isolated human neutrophils were incubated with DMOG (dimethyloxalylglycine), which caused stabilisation of HIF-α (hypoxia inducible factor). That switched neutrophils to the hypoxic mode. Citrullinated histone H3 was determined by western blot, intracellular ATP level was also monitored. The results show that DMOG-induced hypoxia leads to histone H3 citrullination. Citrullination was observed already after 2 hours of incubation and the most intensive citrullination was observed when 2 mM DMOG was used. In addition, I observed that intracellular ATP concentration probably does not affect histone H3 citrullination, but further research is needed to completely elucidate the mechanism of action.