Human embryonic stem cells are currently very frequent topic, not only in the scientific world. Their unlimited self-renewal capacity and the ability to develop into any cell type of an adult organism predeterminates them for their potential clinical use. Although there is a lot known e.g. about the culture conditions for their proper growth, about their cell signaling and differentiation capacity, little attention has been paid to research of their metabolic properties yet. Understanding their metabolism is equally important, as they have similar metabolic characteristics to those of tumor cells. These characteristics could be one of the causes of teratomas, which stem cells form very often, when transplanted into a living organism. The aim of this thesis is to develop methods for accurate measurement of some metabolic parameters. Development of these methods could contribute to more accurate analysis of the metabolic changes occurring during their differentiation into specialized cell types. A constituent part the thesis is also to apply those methods to metabolites measurement in cultures of human stem cells (either embryonic or induced) and differentiated cells.