Curriculum Vitae

Curriculum Vitae

Person-Related Identification Information

• Assoc. Prof. RNDr. Jaromír Marek, Ph.D. (1964), X-ray crystallographer

Employment - Position

• Core Facility Single Crystal Diffraction (Central-European Technology Institute) - head
• Research group X-ray Crystallography (Central-European Technology Institute) - head
• Department of Experimental Biology (Faculty of Science) - independent scientist-researcher

Education and Academic Qualifications

• 2000: Associate Professor, Masaryk University, Brno (Chemistry)
• 1995: Ph.D. (Dr.), Masaryk University, Brno (Chemistry)
• 1987: M.S. (RNDr.) - Jan Evangelista Purkyne University, Brno (Physics)

Employment

• 2011- : Core Facility Single Crystal Diffraction, Centre for Structural Biology, CEITEC MU, Masaryk University, independent scientist-researcher and head of CF
• 2011- : Research group X-ray Crystallography, Centre for Structural Biology, CEITEC MU, Masaryk University, independent scientist-researcher and head of RG
• 2006-2011: Dept of Inorganic Chemistry, Fac Sci, Palacky University Olomouc, scientific researcher
• 2001- : Dept of Functional Genomics and Proteomics, Fac Sci, Masaryk University, independent scientist-researcher
• 2000: Dept of Functional Genomics and Proteomics, Fac Sci, Masaryk University, scientific researcher
• 1996-2000: Laboratory of Biomolecular Structure and Dynamics, Fac Sci, Masaryk University, scientific researcher
• 1991-2000: Dept of Inorganic Chemistry, Fac Sci, Masaryk University, assistant professor
• 1990-1991: Dept of Solid State Physics, Fac Sci, Masaryk University, research worker
• 1987-1990: TESLA Rožnov, research worker

Ph.D. students

• Mgr. Tomáš Klumpler, Ph.D. (2011)
• Mgr. Jitka Vévodová, Ph.D. (2002)
• Doc. Mgr. Ivana Kutá-Smatanová, PhD. (1999)

Scientific and Research Activities

• Scientific interests of J. Marek are focused mainly on the single crystal diffraction. He published more than 150 MS. HI=20.

Internship

• 1992-1993 - 6 months - University of Lund, Sweden - student internship (Tempus)
• 1998-1999 - 4 months - University of Lund, Sweden - scientific exchange between the Czech Republic and Sweden

Activities Outside University

• 2008-2012 - The Ministry of Education, Youth and Sports of the Czech Republic - reviewer of projects of the European Social Fund (ESF) in the CR within the Education for Competitiveness Operational Programme (ECOP) - Priority axis 2 - Tertiary education, research and development

Major Publications

• HUDSON, J J R, Kateřina BEDNÁŘOVÁ, Lucie KOZÁKOVÁ, Chunyan LIAO, Marc GUÉRINEAU, Rita COLNAGHI, Susanne VIDOT, Jaromír MAREK, Sreenivas Reddy BATHULA, Alan LEHMANN and Jan PALEČEK. Interactions between the Nse3 and Nse4 Components of the SMC5-6 Complex Identify Evolutionarily Conserved Interactions between MAGE and EID Families. PloS ONE. San Francisco: Public Library of Science, 2011, vol. 6, No 2, p. "nestránkováno", 14 pp. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0017270. URL info
• TRÁVNÍČEK, Zdeněk, Radka NOVOTNÁ, Jaromír MAREK and Igor POPA. Transformations of the natural cytokinin N6-isopentenyladenine in aqueous acidic media: structural aspects. Organic and Biomolecular Chemistry. Cambridge, UK: Royal Society of Chemistry, 2011, vol. 9, No 16, p. 5703-5713. ISSN 1477-0520. DOI info
• PEKÁROVÁ, Blanka, Tomáš KLUMPLER, Olga TŘÍSKOVÁ, Jakub HORÁK, Séverine JANSEN, Radka DOPITOVÁ, Petra BORKOVCOVÁ, Veronika PAPOUŠKOVÁ, Eliška NEJEDLÁ, Vladimír SKLENÁŘ, Jaromír MAREK, Lukáš ŽÍDEK, Jan HEJÁTKO and Lubomír JANDA. Structure and binding specificity of the receiver domain of sensor histidine kinase CKI1 from Arabidopsis thaliana. The Plant Journal. England: BLACKWELL PUBLISHING, 2011, vol. 67, No 5, p. 827-839. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/j.1365-313X.2011.04637.x. URL info
• JEŘÁBKOVÁ, Barbora, Jaromír MAREK, H. BUČKOVÁ, Lenka KOPEČKOVÁ, Karel VESELÝ, J. VALÍČKOVÁ, Jiří FAJKUS and Lenka FAJKUSOVÁ. Keratin mutations in patients with epidermolysis bullosa simplex: correlations between phenotype severity and disturbance of intermediate filament molecular structure. The British journal of dermatology : the official organ of the British Association of Dermatology. London: H.K. Lewis & Co., 2010, vol. 162, ., p. 1004-1013. ISSN 0007-0963. info
• DUTTA, D., A.D. JANA, M. DEBNATH, A. BHAUMIK, Jaromír MAREK and Mahammad ALI. Robust 1D open rack-like architecture in coordination polymers of Anderson POMs [{Na-4(H2O)(14)}{Cu(gly)}(2)][TeMo6O24] and [{Cu(en)(2)}(3){TeW6O24}]: synthesis, characterization and heterogeneous catalytic epoxidation of olefines. Dalton transactions : an international journal of inorganic chemistry. Cambridge: The Royal Society of Chemistry, 2010, vol. 39, No 48, p. 11551-11559. ISSN 1477-9226. URL info
• CHRAPPOVÁ, J., P. SCHWENDT, M. SIVÁK, M. REPISKÝ, V. G. MALKIN and Jaromír MAREK. Dinuclear fluoro-peroxovanadium(V) complexes with symmetric and asymmetric peroxo bridges: syntheses, structures and DFT studies. Dalton transactions : an international journal of inorganic chemistry. Cambridge: The Royal Society of Chemistry, 2009, vol. 2009, No 3, p. 465-473. ISSN 1477-9226. info
• ALI, M., D. DUTTA, S. BISWAS, Jaromír MAREK and A. D. JANA. The first crystallographic observation of up to the third hydration layer of Cu(II) ion in an unusual 'water-cation layer' templated by an Anderson polyoxometallate. CRYSTENGCOMM. Cambridge, UK: RSC Publishing, 2009, vol. 11, No 12, p. 2608-2610. ISSN 1466-8033. URL info
• ZOUHAR, Jan, Jitka VÉVODOVÁ, Jaromír MAREK, Jiří DAMBORSKÝ, X.-D. SU and Břetislav BRZOBOHATÝ. Insights into the Functional Architecture of the Catalytic Center of a Maize Beta-Glucosidase Zm-p60.1. Plant Physiology. USA: American Society of Plant Physiologists, 2001, vol. 127, No 3, p. 973-985. ISSN 0032-0889. info
• MAREK, Jaromír, Jitka VÉVODOVÁ, Ivana KUTÁ-SMATANOVÁ, Y. NAGATA, L.A. SVENSSON, J. NEWMAN, M. TAKAGI and Jiří DAMBORSKÝ. Crystal structure of the haloalkane dehalogenase from Sphingomonas paucimobilis UT26. Biochemistry. Washington, DC, USA: American Chemical Society, 2000, vol. 39, No 46, p. 14082-14086. ISSN 0006-2960. URL info

2012/06/04