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Curriculum vitae

Person Identification
  • Mgr. Eva Fadrna, PhD., born March 26, 1971, in Brno, Czechoslovakia.
Workplace
  • National Centre for Biomolecular Research
    Faculty of Science MU
    Kotlarska 2
    611 37 Brno
    Czech Republic
Employment Position
  • Research Assistant
Education and Academic Qualifications
  • 1999: PhD in Organic Chemistry, Faculty of Science, Masaryk University of Brno, ``Conformational behavior of nucleic acids fragments - a computational study'';
  • 1994: Mgr (degree equivalent to MSc.) in Biochemistry, Faculty of Science, Masaryk University of Brno, ``Computational study of conformational behavior and flexibility of oligonucleotides''.
Employment Summary
  • 1999 - : Research Assistant, National Centre for Biomolecular Research (former Laboratory of Biomolecular Structure and Dynamics), Faculty of Science, MU, Brno.
Pedagogical Activities
  • Introduction to Unix and Internet
  • participation on the lectures in Structural biochemistry
Scientific and Research Activities
  • Computational studies on biologically interesting molecules (nucleic acids fragments), studies of molecular flexibility.
Academical Stays
  • 1997: two-month research stay at Paris, France.
Projects
  • 1996 - : Czech Chemical Society - member
Appreciation of Science Community
  • 1999 - Prize of University - for PhD work
  • 1997 - Prix de Chimie, Rhone Poulenc
Selected Publications
  • FADRNÁ, Eva, Naděžda ŠPAČKOVÁ, Daniel SVOZIL, Jiří ŠPONER and Jaroslav KOČA. Human telomeric G-DNA - a test example for force field adjustment. In Journal Of Biomolecular Structure and Dynamics. Albany: Adenine Press, 2007, p. 709-709. ISSN 0006-3525. info
  • FADRNÁ, Eva, Jiří FUKAL and Jaroslav KOČA. Computational study of restriction endonuclease HincII. In Materials Structure, vol. 14, no. 1 (2007), 6th Discussions in Structural Molecular Biology. Nové Hrady, Czech Republic: Academic and University Center, Nové Hrady, 2007, p. 33-33. info
  • FADRNÁ, Eva, Jaroslav KOČA and Jiří ŠPONER. Influence of Ion Parameters On Molecular Dynamics and/or Free Energy Calculation (Influence of Ion Parameters On Molecular Dynamics and/or Free Energy Calculatio). In Workshop on Modelling interactions in Biomolecules II. Praha: Karlova Univerzita Praha, 2005, p. O, 1 pp. info
  • FADRNÁ, Eva, Klára HLADEČKOVÁ and Jaroslav KOČA. Long-range Electrostatic Interactions in Molecular Dynamics: An Endothelin-1 Case Study. Journal of Biomolecular Structure and Dynamics. USA: Adenine Press, 2005, vol. 23, No 2, p. 151-162. ISSN 0739-1102. URL info
  • FADRNÁ, Eva, Naděžda ŠPAČKOVÁ, Richard ŠTEFL, Jaroslav KOČA, Thomas E. CHEATHAM and Jiří ŠPONER. Molecular dynamics simulations of guanine quadruplex loops:Advances and force field limitations. Biophysical Journal. Bethesda, USA: Biophysical Society, 2004, vol. 87, No 1, p. 227-242. ISSN 0006-3495. URL info
  • FADRNÁ, Eva, Naděžda ŠPAČKOVÁ, Jaroslav KOČA and Jiří ŠPONER. Struktura a interakce nukleových kyselin pohledem molekulové dynamiky (Structure and dynamics of nucleic acids in a framework of molecular dynamics). In sborník konference. 2004th ed. Pardubice: XXVII. Konference organických chemiků, 2004, p. 07-9. ISBN 80-7194-671-0. info
  • FADRNÁ, Eva and Jaroslav KOČA. Conformational Flexibility of Two RNA Trimers Explored by Computational Tools and Database Search. Journal of Biomolecular Structure and Dynamics. USA: Adenine Press, 2003, vol. 20, No 5, p. 715-731. ISSN 0739-1102. URL info
  • ŠTEFL, Richard, Thomas E. CHEATHAM, Naděžda ŠPAČKOVÁ, Eva FADRNÁ, Imre BERGER, Jaroslav KOČA and Jiří ŠPONER. Formation Pathways of a Guanine-Quadruplex DNA Revealed by Molecular Dynamics and Thermodynamics Analysis of the Substates. Biophysical Journal. Bethesda, USA: Biophysical Society, 2003, vol. 85, No 3, p. 1787-1804. ISSN 0006-3495. URL info
  • FADRNÁ, Eva, Naděžda ŠPAČKOVÁ, Jiří ŠPONER and Jaroslav KOČA. Conformational Flexibility of DNA sequences studied by Advanced Molecular Mechanics and Dynamics Tools. In Book of Abstracts. 2003rd ed. Praha: Workshop on Modeling Interactions in Biomolecules, 2003, p. 20. info
  • ŠTEFL, Richard, Eva FADRNÁ and Jaroslav KOČA. Differences in Conformational Behavior of ATA and TAT Sequences in Single Strand DNA Trimer. Journal of Biomolecular Structure and Dynamics. USA: Adenine Press, 1999, vol. 16, No 5, p. 1087-1095. ISSN 0739-1102. URL info
  • FADRNÁ, Eva and Jaroslav KOČA. Single-coordinate-driving method combined with simulated annealing. An efficient tool to search conformational space. Journal of Physical Chemistry B. USA: ACS Publications, 1997, vol. 101, No 39, p. 7863-7868. ISSN 1089-5647. URL info
  • FADRNÁ, Eva and Jaroslav KOČA. A combination of driving method with simulated annealing to search conformational space. Journal of Molecular Structure (Theochem). Netherlands: Elsevier Science, 1997, vol. 398, No 399, p. 523-528. ISSN 0166-1280. URL info
  • FADRNÁ, Eva and Jaroslav KOČA. CICADA Interface with AMBER. An Application on Oligonucleotides and their Fragments. Journal of Biomolecular Structure and Dynamics. USA: Adenine Press, 1996, vol. 14, No 1, p. 137-152. ISSN 0739-1102. URL info

2001/11/16

Curriculum vitae: Mgr. Eva Fadrná, Ph.D. (učo 1573), version: English(1), last update: 2001/11/16 15:15, E. Fadrná

Another Variant: Czech(1)