Bi8420 Microbial ecology

Faculty of Science
Spring 2015
Extent and Intensity
2/0/0. 2 credit(s) (fasci plus compl plus > 4). Type of Completion: zk (examination).
Teacher(s)
doc. Ing. Martin Krsek, CSc., MSc (lecturer)
Guaranteed by
doc. RNDr. Miroslav Němec, CSc.
Department of Experimental Biology – Biology Section – Faculty of Science
Contact Person: doc. RNDr. Miroslav Němec, CSc.
Supplier department: Department of Experimental Biology – Biology Section – Faculty of Science
Timetable
Wed 13:00–14:50 E25/209
Prerequisites
Examination - microbiology, biochemistry, ecology of plants and animals.
Course Enrolment Limitations
The course is offered to students of any study field.
Course objectives
At the end of this course students will be able to define basic categories in microbial ecology, to understand importance of microbes for trophic chains and nutrient cycling in nature, their contribution to geochemical transformations and relationship between microbes, plants and animals.
Syllabus
  • Introduction, history of microbial ecology. Microbial communities – composition, diversity, nutrition. Colonization, succession, climax. Structure of microbial communities, interactions within communities. Interactions between microbes and animals, and plants. Microbes in their natural habitats – atmo-ecosphere, hydro-ecosphere, litho-ecosphere. Quantitative ecology – sample collection and processing, detection of microbial populations, determination of microbial numbers and microbial biomass, methods of molecular microbial ecology. Biogeochemical cycles.
Literature
    recommended literature
  • Killman K. : Soil ecology. Cambridge University Press, 1995
  • I.L.Pepper, C.P.Gerba, T.J.Gentry: Environmental Microbiology, Academic Press, 2015
  • Larry L. Barton, D.E.Northup: Microbial Ecology, Wiley-Blackwell, 2011
  • Brock T.D. : Principles of microbial ecology. Prentice, 1966
  • Němec M. : Ekologie mikroorganismů. Praha , 1986
  • Atlas RM, Bartha R: Microbial ecology: fundamentals and applications. Benjamin/Cummings Publishing Company, 1997
Teaching methods
Lecture - powerpoint presentation.
Assessment methods
Oral examination. To pass successfully the examination student has to answer correctly at least half of given questions.
Language of instruction
Czech
Further comments (probably available only in Czech)
Study Materials
The course is taught annually.
The course is also listed under the following terms Spring 2008 - for the purpose of the accreditation, Spring 2011 - only for the accreditation, Spring 2003, Spring 2004, Spring 2005, Spring 2006, Spring 2007, Spring 2008, Spring 2009, Spring 2010, Spring 2011, Spring 2012, spring 2012 - acreditation, Spring 2013, Spring 2014, Spring 2016, Spring 2017, spring 2018, Spring 2019, Spring 2020, Spring 2021, Spring 2022, Spring 2023, Spring 2024, Spring 2025.
  • Enrolment Statistics (Spring 2015, recent)
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