HOLUB, Petr, Kamila GREPLOVÁ, Dana KNOFLÍČKOVÁ a Dalibor VALÍK. The Biobanking Research Infrastructurec BBMRI_CZ: a Critical Tool to Enhance. Klinická onkologie. Praha: Česká lékařská společnost J.E.Purkyně, 2012, roč. 2012, č. 2, s. 2S78- 2S81, 4 s. ISSN 0862-495X. |
Další formáty:
BibTeX
LaTeX
RIS
@article{1087133, author = {Holub, Petr and Greplová, Kamila and Knoflíčková, Dana and Valík, Dalibor}, article_location = {Praha}, article_number = {2}, keywords = {biobanking; databases; cancer research}, language = {eng}, issn = {0862-495X}, journal = {Klinická onkologie}, title = {The Biobanking Research Infrastructurec BBMRI_CZ: a Critical Tool to Enhance}, volume = {2012}, year = {2012} }
TY - JOUR ID - 1087133 AU - Holub, Petr - Greplová, Kamila - Knoflíčková, Dana - Valík, Dalibor PY - 2012 TI - The Biobanking Research Infrastructurec BBMRI_CZ: a Critical Tool to Enhance JF - Klinická onkologie VL - 2012 IS - 2 SP - 2S78- 2S81 EP - 2S78- 2S81 PB - Česká lékařská společnost J.E.Purkyně SN - 0862495X KW - biobanking KW - databases KW - cancer research N2 - We introduce the national research biobanking infrastructure, BBMRI_CZ. The infrastructure has been founded by the Ministry of Education and became a partner of the European biobanking infrastructure BBMRI.eu. It is designed as a network of individual biobanks where each biobank stores samples obtained from associated healthcare providers. The biobanks comprise long term storage (various types of tissues classified by diagnosis, serum at surgery, genomic DNA and RNA) and short term storage (longitudinally sampled patient sera). We discuss the operation workflow of the infrastructure that needs to be the distributed system: transfer of the samples to the biobank needs to be accompanied by extraction of data from the hospital information systems and this data must be stored in a central index serving mainly for sample lookup. Since BBMRI_CZ is designed solely for research purposes, the data is anonymised prior to their integration into the central BBMRI_CZ index. The index is then available for registered researchers to seek for samples of interest and to request the samples from biobank managers. The paper provides an overview of the structure of data stored in the index. We also discuss monitoring system for the biobanks, incorporated to ensure quality of the stored samples. ER -
HOLUB, Petr, Kamila GREPLOVÁ, Dana KNOFLÍČKOVÁ a Dalibor VALÍK. The Biobanking Research Infrastructurec BBMRI\_{}CZ: a Critical Tool to Enhance. \textit{Klinická onkologie}. Praha: Česká lékařská společnost J.E.Purkyně, 2012, roč.~2012, č.~2, s.~2S78- 2S81, 4 s. ISSN~0862-495X.
|