Description of Pseudomonas jessenii subsp. pseudoputida subsp.
nov., amended description of Pseudomonas jessenii and
description of Pseudomonas jessenii subsp. jessenii subsp. nov.

J 2013

Description of Pseudomonas jessenii subsp. pseudoputida subsp. nov., amended description of Pseudomonas jessenii and description of Pseudomonas jessenii subsp. jessenii subsp. nov.

KOSINA, Marcel, Ivana MAŠLAŇOVÁ, Andrea VÁVROVÁ PASCUTTI, Ondrej ŠEDO, Matej LEXA et. al.

Základní údaje

Originální název

Description of Pseudomonas jessenii subsp. pseudoputida subsp. nov., amended description of Pseudomonas jessenii and description of Pseudomonas jessenii subsp. jessenii subsp. nov.

Autoři

KOSINA, Marcel (203 Česká republika, garant, domácí), Ivana MAŠLAŇOVÁ (203 Česká republika, domácí), Andrea VÁVROVÁ PASCUTTI (203 Česká republika, domácí), Ondrej ŠEDO (203 Česká republika, domácí), Matej LEXA (703 Slovensko, domácí), Pavel ŠVEC (203 Česká republika, domácí) a Ivo SEDLÁČEK (203 Česká republika, domácí)

Vydání

Folia Microbiologica, Praha, Czechoslovak Society for Microbiology, 2013, 0015-5632

Další údaje

Jazyk

angličtina

Typ výsledku

Článek v odborném periodiku

Obor

10600 1.6 Biological sciences

Stát vydavatele

Česká republika

Utajení

není předmětem státního či obchodního tajemství

Odkazy

URL

Impakt faktor

Impact factor: 1.145

Kód RIV

RIV/00216224:14310/13:00068207

Organizační jednotka

Přírodovědecká fakulta

DOI

http://dx.doi.org/10.1007/s12223-013-0236-8

UT WoS

000324835100027

Klíčová slova anglicky

Pseudomonas jessenii subsp. pseudoputida subsp. nov.; phenotyping; ribotyping; rpoB; rrs

Štítky

AKR, podil, Pseudomonas jessenii subsp pseudoputida, rivok, ZR

Příznaky

Mezinárodní význam

Změněno: 13. 3. 2018 14:19, doc. Ing. Matej Lexa, Ph.D.

Anotace

V originále

Fluorescent Pseudomonas putida CCM 3656 (ATCC 11250) was analysed according to the methods of polyphasic approach which were based on sequence analyses involving the rpoB and rrs genes, manual ribotyping using endonuclease HindIII, DNA base composition determination and DNA-DNA hybridization. The results obtained by these genotyping methods showed that the strain CCM 3656 is distant from P. putida taxon, which was supported with phenotype characterization represented by whole-cell protein profile analysis, matrix-assisted laser desorption/ionization-time-of-flight mass spectrometry profiling and extended biotyping. The DNA-DNA hybridization experiments performed between the strain CCM 3656 and the closest relatives revealed 77 % similarity with Pseudomonas jessenii. However, the outcomes of sequencing, ribotyping and phenotype characterization allow distinguishing the studied strain from P. jessenii. On the basis of the obtained taxonomic data, we suggest reclassifying strain CCM 3656 to a novel subspecies of P. jessenii and propose naming P. jessenii subsp. pseudoputida subsp. nov. with CCM 3656T as type strain. Furthermore, we present an amended description of P. jessenii and proposal of P. jessenii subsp. jessenii subsp. nov.

Návaznosti

EE2.3.20.0183, projekt VaV

Název: Centrum experimentální biomedicíny

Přiložené soubory

ZVV_2013_33_1105098.pdf

Požádat o autorskou verzi souboru

Citovat

KOSINA, Marcel, Ivana MAŠLAŇOVÁ, Andrea VÁVROVÁ PASCUTTI, Ondrej ŠEDO, Matej LEXA, Pavel ŠVEC a Ivo SEDLÁČEK. Description of Pseudomonas jessenii subsp. pseudoputida subsp. nov., amended description of Pseudomonas jessenii and description of Pseudomonas jessenii subsp. jessenii subsp. nov. Folia Microbiologica. Praha: Czechoslovak Society for Microbiology, 2013, roč. 58, č. 6, s. 631-639. ISSN 0015-5632. Dostupné z: https://dx.doi.org/10.1007/s12223-013-0236-8.

@article{1105098,
   author = {Kosina, Marcel and Mašlaňová, Ivana and Vávrová Pascutti, Andrea and Šedo, Ondrej and Lexa, Matej and Švec, Pavel and Sedláček, Ivo},
   article_location = {Praha},
   article_number = {6},
   doi = {http://dx.doi.org/10.1007/s12223-013-0236-8},
   keywords = {Pseudomonas jessenii subsp. pseudoputida subsp. nov.; phenotyping; ribotyping; rpoB; rrs},
   language = {eng},
   issn = {0015-5632},
   journal = {Folia Microbiologica},
   title = {Description of Pseudomonas jessenii subsp. pseudoputida subsp. nov., amended description of Pseudomonas jessenii and description of Pseudomonas jessenii subsp. jessenii subsp. nov.},
   url = {http://www.ncbi.nlm.nih.gov/pubmed/23636777},
   volume = {58},
   year = {2013}
}

TY  - JOUR
ID  - 1105098
AU  - Kosina, Marcel - Mašlaňová, Ivana - Vávrová Pascutti, Andrea - Šedo, Ondrej - Lexa, Matej - Švec, Pavel - Sedláček, Ivo
PY  - 2013
TI  - Description of Pseudomonas jessenii subsp. pseudoputida subsp. nov., amended description of Pseudomonas jessenii and description of Pseudomonas jessenii subsp. jessenii subsp. nov.
JF  - Folia Microbiologica
VL  - 58
IS  - 6
SP  - 631-639
EP  - 631-639
PB  - Czechoslovak Society for Microbiology
SN  - 00155632
KW  - Pseudomonas jessenii subsp. pseudoputida subsp. nov.
KW  - phenotyping
KW  - ribotyping
KW  - rpoB
KW  - rrs
UR  - http://www.ncbi.nlm.nih.gov/pubmed/23636777
L2  - http://www.ncbi.nlm.nih.gov/pubmed/23636777
N2  - Fluorescent Pseudomonas putida CCM 3656 (ATCC 11250) was analysed according to the methods of polyphasic approach which were based on sequence analyses involving the rpoB and rrs genes, manual ribotyping using endonuclease HindIII, DNA base composition determination and DNA-DNA hybridization. The results obtained by these genotyping methods showed that the strain CCM 3656 is distant from P. putida taxon, which was supported with phenotype characterization represented by whole-cell protein profile analysis, matrix-assisted laser desorption/ionization-time-of-flight mass spectrometry profiling and extended biotyping. The DNA-DNA hybridization experiments performed between the strain CCM 3656 and the closest relatives revealed 77 % similarity with Pseudomonas jessenii. However, the outcomes of sequencing, ribotyping and phenotype characterization allow distinguishing the studied strain from P. jessenii. On the basis of the obtained taxonomic data, we suggest reclassifying strain CCM 3656 to a novel subspecies of P. jessenii and propose naming P. jessenii subsp. pseudoputida subsp. nov. with CCM 3656T as type strain. Furthermore, we present an amended description of P. jessenii and proposal of P. jessenii subsp. jessenii subsp. nov.
ER  -

KOSINA, Marcel, Ivana MAŠLAŇOVÁ, Andrea VÁVROVÁ PASCUTTI, Ondrej ŠEDO, Matej LEXA, Pavel ŠVEC a Ivo SEDLÁČEK. Description of Pseudomonas jessenii subsp. pseudoputida subsp. nov., amended description of Pseudomonas jessenii and description of Pseudomonas jessenii subsp. jessenii subsp. nov. \textit{Folia Microbiologica}. Praha: Czechoslovak Society for Microbiology, 2013, roč.~58, č.~6, s.~631-639. ISSN~0015-5632. Dostupné z: https://dx.doi.org/10.1007/s12223-013-0236-8.

Podrobný výpis o publikaci