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@inproceedings{1122641, author = {Byška, Jan and Jurčík, Adam and Sochor, Jiří}, address = {Germany}, booktitle = {TPCG 2013}, editor = {Silvester Czanner and Wen Tang}, keywords = {voxels;protein; tunnel; computational geometry; visualization}, howpublished = {tištěná verze "print"}, language = {eng}, location = {Germany}, isbn = {978-3-905673-98-2}, pages = {17-24}, publisher = {Eurographics Association}, title = {Geometry-based Algorithm for Detection of Asymmetric Tunnels in Protein Molecules}, year = {2013} }
TY - JOUR ID - 1122641 AU - Byška, Jan - Jurčík, Adam - Sochor, Jiří PY - 2013 TI - Geometry-based Algorithm for Detection of Asymmetric Tunnels in Protein Molecules PB - Eurographics Association CY - Germany SN - 9783905673982 KW - voxels;protein KW - tunnel KW - computational geometry KW - visualization N2 - We present a novel geometry-based method for computing asymmetric tunnels and voids in proteins, approximating their real shape with selected precision. Our method combines ideas from Voronoi and grid based approaches for protein analysis. We represent tunnels in protein using voxel data grid which allows us to store their shape more accurately. Our algorithm employs a tunnel skeleton computed using Voronoi diagram. The skeleton allows us to perform grid computation in a bounded space, with lower time and memory demands, and easily identify and measure individual tunnels. ER -
BYŠKA, Jan, Adam JURČÍK a Jiří SOCHOR. Geometry-based Algorithm for Detection of Asymmetric Tunnels in Protein Molecules. In Silvester Czanner and Wen Tang. \textit{TPCG 2013}. Germany: Eurographics Association, 2013, s.~17-24. ISBN~978-3-905673-98-2.
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