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@article{1138887,
author = {Niharika, Neha and Moskalíková, Hana and Kaur, Jasvinder and Khan, Fazlurrahman and Sedláčková, Miroslava and Hampl, Aleš and Damborský, Jiří and Prokop, Zbyněk and Lal, Rup},
article_number = {Part 2},
doi = {http://dx.doi.org/10.1099/ijs.0.039396-0},
keywords = {LIN GENES; SPHINGOMONAS; IDENTIFICATION; DEGRADATION; ACID; MICROORGANISMS; PHYLOGENY; BACTERIA; STRAIN; SOILS},
language = {eng},
issn = {1466-5026},
journal = {International Journal of Systematic and Evolutionary Microbiology},
title = {Sphingobium czechense sp nov., isolated from a hexachlorocyclohexane dump site},
volume = {63},
year = {2013}
}
TY - JOUR
ID - 1138887
AU - Niharika, Neha - Moskalíková, Hana - Kaur, Jasvinder - Khan, Fazlurrahman - Sedláčková, Miroslava - Hampl, Aleš - Damborský, Jiří - Prokop, Zbyněk - Lal, Rup
PY - 2013
TI - Sphingobium czechense sp nov., isolated from a hexachlorocyclohexane dump site
JF - International Journal of Systematic and Evolutionary Microbiology
VL - 63
IS - Part 2
SP - 723-728
EP - 723-728
PB - SOC GENERAL MICROBIOLOGY
SN - 14665026
KW - LIN GENES
KW - SPHINGOMONAS
KW - IDENTIFICATION
KW - DEGRADATION
KW - ACID
KW - MICROORGANISMS
KW - PHYLOGENY
KW - BACTERIA
KW - STRAIN
KW - SOILS
N2 - A yellow pigmented bacterial strain, designated LL01T, was isolated from hexachlorocyclohexane (HCH)-contaminated soil in Spolana Neratovice, former Czech producer of Lindane. A neighbour-joining tree based on 16S rRNA gene sequences showed that strain LL01T occupied a distinct phylogenetic position in the Sphingobium cluster, showing highest similarity with Sphingobium rhizovicinum CC-FH12-1T (98.5%). The DNA G+C content of strain LL01T was 66.1 mol%. The predominant respiratory pigment ubiquonone Q10 is present. The polar lipid profile of the strain LL01T also corresponded to those reported for other Sphingobium species (phosphatidylethanolamine, diphosphatidylglycerol, phosphatidylcholine, phosphatidylglycerol, phosphatidylmonomethylethanolamine, phosphatidyldimethylethanolamine, sphingoglycolipids), supporting its identification as member of the genus Sphingobium. Spermidine was the major polyamine observed in the cell. The results obtained after DNA-DNA hybridization, biochemical and physiological tests clearly distinguished it from closely related species of the genus Sphingobium. Therefore, strain LL01T represents a novel species of the genus Sphingobium for which the name Sphingobium czechense LL01T sp. nov. is proposed (=CCM 7979T=DSM 25410T).
ER -
NIHARIKA, Neha, Hana MOSKALÍKOVÁ, Jasvinder KAUR, Fazlurrahman KHAN, Miroslava SEDLÁČKOVÁ, Aleš HAMPL, Jiří DAMBORSKÝ, Zbyněk PROKOP a Rup LAL. Sphingobium czechense sp nov., isolated from a hexachlorocyclohexane dump site. \textit{International Journal of Systematic and Evolutionary Microbiology}. SOC GENERAL MICROBIOLOGY, 2013, roč.~63, Part 2, s.~723-728. ISSN~1466-5026. Dostupné z: https://dx.doi.org/10.1099/ijs.0.039396-0.
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