J 2014

Chromatin features of plant telomeric sequences at terminal vs. internal positions

MAJEROVÁ, Eva, Terezie MANDÁKOVÁ, GTH VU, Jiří FAJKUS, Martin LYSÁK et. al.

Basic information

Original name

Chromatin features of plant telomeric sequences at terminal vs. internal positions

Authors

MAJEROVÁ, Eva (203 Czech Republic, belonging to the institution), Terezie MANDÁKOVÁ (203 Czech Republic, belonging to the institution), GTH VU (276 Germany), Jiří FAJKUS (203 Czech Republic, guarantor, belonging to the institution), Martin LYSÁK (203 Czech Republic, belonging to the institution) and Miloslava FOJTOVÁ (203 Czech Republic, belonging to the institution)

Edition

Frontiers in Plant Science, LAUSANNE, Frontiers Research Foundation, 2014, 1664-462X

Other information

Language

English

Type of outcome

Článek v odborném periodiku

Field of Study

10611 Plant sciences, botany

Country of publisher

Switzerland

Confidentiality degree

není předmětem státního či obchodního tajemství

References:

Impact factor

Impact factor: 3.948

RIV identification code

RIV/00216224:14740/14:00074402

Organization unit

Central European Institute of Technology

UT WoS

000346855100002

Keywords in English

telomere; chromatin; epigenetics; Nicotiana tabacum; Ballantinia antipoda; histone modifications; DNA methylation

Tags

International impact, Reviewed
Změněno: 10/12/2019 09:57, Mgr. Marie Šípková, DiS.

Abstract

V originále

Epigenetic mechanisms are involved in regulation of crucial cellular processes in eukaryotic organisms. Data on the epigenetic features of plant telomeres and their epigenetic regulation were published mostly for Arabidopsis thaliana, in which the presence of interstitial telomeric repeats (ITRs) may interfere with genuine telomeres in most analyses. Here, we studied the epigenetic landscape and transcription of telomeres and ITRs in Nicotiana tabacum with long telomeres and no detectable ITRs, and in Ballantinia antipoda with large blocks of pericentromeric ITRs and relatively short telomeres. Chromatin of genuine telomeres displayed heterochromatic as well as euchromatic marks, while ITRs were just heterochromatic. Methylated cytosines were present at telomeres and ITRs, but showed a bias with more methylation toward distal telomere positions and different blocks of B. antipoda ITRs methylated to different levels. Telomeric transcripts TERRA (G-rich) and ARRET (C-rich) were identified in both plants and their levels varied among tissues with a maximum in blossoms. Plants with substantially different proportions of internally and terminally located telomeric repeats are instrumental in clarifying the chromatin status of telomeric repeats at distinct chromosome locations.

Links

ED1.1.00/02.0068, research and development project
Name: CEITEC - central european institute of technology
EE2.3.20.0189, research and development project
Name: Rozvoj výzkumné excelence v oblasti evoluční cytogenomiky, epigenetiky a buněčné signalizace
EE2.3.30.0037, research and development project
Name: Zaměstnáním nejlepších mladých vědců k rozvoji mezinárodní spolupráce
GAP501/11/0596, research and development project
Name: Epigenetické mechanismy regulace rostlinných telomer (Acronym: epigenetika telomer)
Investor: Czech Science Foundation