Complete mitochondrial genome of the giant liver fluke
Fascioloides magna (Digenea: Fasciolidae) and its comparison
with selected trematodes

J 2016

Complete mitochondrial genome of the giant liver fluke Fascioloides magna (Digenea: Fasciolidae) and its comparison with selected trematodes

MA, Jun, Jun-Jun HE, Guo-Hua LIU, Roman LEONTOVYČ, Martin KAŠNÝ et. al.

Základní údaje

Originální název

Complete mitochondrial genome of the giant liver fluke Fascioloides magna (Digenea: Fasciolidae) and its comparison with selected trematodes

Autoři

MA, Jun (156 Čína), Jun-Jun HE (156 Čína), Guo-Hua LIU (156 Čína), Roman LEONTOVYČ (203 Česká republika), Martin KAŠNÝ (203 Česká republika, garant, domácí) a Xing-Quan ZHU (156 Čína)

Vydání

PARASITES & VECTORS, BioMed Central, 2016, 1756-3305

Další údaje

Jazyk

angličtina

Typ výsledku

Článek v odborném periodiku

Obor

30309 Tropical medicine

Stát vydavatele

Velká Británie a Severní Irsko

Utajení

není předmětem státního či obchodního tajemství

Impakt faktor

Impact factor: 3.035

Kód RIV

RIV/00216224:14310/16:00093533

Organizační jednotka

Přírodovědecká fakulta

DOI

http://dx.doi.org/10.1186/s13071-016-1699-7

UT WoS

000381193700001

Klíčová slova anglicky

Fascioloides magna; Fasciola; Mitochondrial genome; Phylogenetic analysis

Štítky

AKR, rivok

Změněno: 6. 3. 2018 14:36, Mgr. Lucie Jarošová, DiS.

Anotace

V originále

Background: Representatives of the trematode family Fasciolidae are responsible for major socio-economic losses worldwide. Fascioloides magna is an important pathogenic liver fluke of wild and domestic ungulates. To date, only a limited number of studies concerning the molecular biology of F. magna exist. Therefore, the objective of the present study was to determine the complete mitochondrial (mt) genome sequence of F. magna, and assess the phylogenetic relationships of this fluke with other trematodes based on the mtDNA dataset. Findings: The complete F. magna mt genome sequence is 14,047 bp. The gene content and arrangement of the F. magna mt genome is similar to those of Fasciola spp., except that trnE is located between trnG and the only non-coding region in F. magna mt genome. Phylogenetic relationships of F. magna with selected trematodes using Bayesian inference (BI) was reconstructed based on the concatenated amino acid sequences for 12 protein-coding genes, which confirmed that the genus Fascioloides is closely related to the genus Fasciola; the intergeneric differences of amino acid composition between the genera Fascioloides and Fasciola ranged 17.97-18.24 %. Conclusions: The determination of F. magna mt genome sequence provides a valuable resource for further investigations of the phylogeny of the family Fasciolidae and other trematodes, and represents a useful platform for designing appropriate molecular markers.

Návaznosti

MUNI/A/1325/2015, interní kód MU

Název: Analýzy diverzity biologických systémů různých úrovní a na různých škálách prostředí (Akronym: BIDA5)

Investor: Masarykova univerzita, Analýzy diverzity biologických systémů různých úrovní a na různých škálách prostředí, DO R. 2020_Kategorie A - Specifický výzkum - Studentské výzkumné projekty

Citovat

MA, Jun, Jun-Jun HE, Guo-Hua LIU, Roman LEONTOVYČ, Martin KAŠNÝ a Xing-Quan ZHU. Complete mitochondrial genome of the giant liver fluke Fascioloides magna (Digenea: Fasciolidae) and its comparison with selected trematodes. PARASITES & VECTORS. BioMed Central, 2016, roč. 9, August, s. "nestrankovano", 7 s. ISSN 1756-3305. Dostupné z: https://dx.doi.org/10.1186/s13071-016-1699-7.

@article{1372491,
   author = {Ma, Jun and He, JunandJun and Liu, GuoandHua and Leontovyč, Roman and Kašný, Martin and Zhu, XingandQuan},
   article_number = {August},
   doi = {http://dx.doi.org/10.1186/s13071-016-1699-7},
   keywords = {Fascioloides magna; Fasciola; Mitochondrial genome; Phylogenetic analysis},
   language = {eng},
   issn = {1756-3305},
   journal = {PARASITES & VECTORS},
   title = {Complete mitochondrial genome of the giant liver fluke Fascioloides magna (Digenea: Fasciolidae) and its comparison with selected trematodes},
   volume = {9},
   year = {2016}
}

TY  - JOUR
ID  - 1372491
AU  - Ma, Jun - He, Jun-Jun - Liu, Guo-Hua - Leontovyč, Roman - Kašný, Martin - Zhu, Xing-Quan
PY  - 2016
TI  - Complete mitochondrial genome of the giant liver fluke Fascioloides magna (Digenea: Fasciolidae) and its comparison with selected trematodes
JF  - PARASITES & VECTORS
VL  - 9
IS  - August
SP  - "nestrankovano"
EP  - "nestrankovano"
PB  - BioMed Central
SN  - 17563305
KW  - Fascioloides magna
KW  - Fasciola
KW  - Mitochondrial genome
KW  - Phylogenetic analysis
N2  - Background: Representatives of the trematode family Fasciolidae are responsible for major socio-economic losses worldwide. Fascioloides magna is an important pathogenic liver fluke of wild and domestic ungulates. To date, only a limited number of studies concerning the molecular biology of F. magna exist. Therefore, the objective of the present study was to determine the complete mitochondrial (mt) genome sequence of F. magna, and assess the phylogenetic relationships of this fluke with other trematodes based on the mtDNA dataset. Findings: The complete F. magna mt genome sequence is 14,047 bp. The gene content and arrangement of the F. magna mt genome is similar to those of Fasciola spp., except that trnE is located between trnG and the only non-coding region in F. magna mt genome. Phylogenetic relationships of F. magna with selected trematodes using Bayesian inference (BI) was reconstructed based on the concatenated amino acid sequences for 12 protein-coding genes, which confirmed that the genus Fascioloides is closely related to the genus Fasciola; the intergeneric differences of amino acid composition between the genera Fascioloides and Fasciola ranged 17.97-18.24 %. Conclusions: The determination of F. magna mt genome sequence provides a valuable resource for further investigations of the phylogeny of the family Fasciolidae and other trematodes, and represents a useful platform for designing appropriate molecular markers.
ER  -

MA, Jun, Jun-Jun HE, Guo-Hua LIU, Roman LEONTOVYČ, Martin KAŠNÝ a Xing-Quan ZHU. Complete mitochondrial genome of the giant liver fluke Fascioloides magna (Digenea: Fasciolidae) and its comparison with selected trematodes. \textit{PARASITES \&{} VECTORS}. BioMed Central, 2016, roč.~9, August, s.~''nestrankovano'', 7 s. ISSN~1756-3305. Dostupné z: https://dx.doi.org/10.1186/s13071-016-1699-7.

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