KUBÍČEK, Karel, Magdaléna KREJČÍKOVÁ, Pavel BRÁZDA, Eliška ŠMIŘÁKOVÁ, Jiří NOVÁČEK, Patrick CRAMER and Richard ŠTEFL. What are the key aspects of interaction between RNA polymerase II C-terminal domain phosphorylated on tyrosine-1 and the elongation factors. In 41st FEBS Congress on Molecular and Systems Biology for a Better Life. 2016. ISSN 1742-464X.
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Basic information
Original name What are the key aspects of interaction between RNA polymerase II C-terminal domain phosphorylated on tyrosine-1 and the elongation factors
Authors KUBÍČEK, Karel (203 Czech Republic, belonging to the institution), Magdaléna KREJČÍKOVÁ (203 Czech Republic, belonging to the institution), Pavel BRÁZDA (203 Czech Republic, belonging to the institution), Eliška ŠMIŘÁKOVÁ (203 Czech Republic, belonging to the institution), Jiří NOVÁČEK (203 Czech Republic, belonging to the institution), Patrick CRAMER (276 Germany) and Richard ŠTEFL (203 Czech Republic, guarantor, belonging to the institution).
Edition 41st FEBS Congress on Molecular and Systems Biology for a Better Life, 2016.
Other information
Original language English
Type of outcome Conference abstract
Field of Study 10600 1.6 Biological sciences
Country of publisher United States of America
Confidentiality degree is not subject to a state or trade secret
Impact factor Impact factor: 3.902
RIV identification code RIV/00216224:14740/16:00096391
Organization unit Central European Institute of Technology
ISSN 1742-464X
UT WoS 000383616900059
Keywords in English RNA polymerase II; CTD; tSH2 Spt6; elongation factor; structural biology; NMR; transcription
Tags rivok
Changed by Changed by: Mgr. Eva Špillingová, učo 110713. Changed: 9/11/2017 09:03.
Abstract
Post-translational modifications of the consensus motif Y1-S2-P3-T4-S5-P6-S7 of the C-terminal domain (CTD) of RNA polymerase II are since last decade known as the “CTD code”. These modifications are dynamic and specific for each phase of the transcriptional cycle. Increased phosphorylation levels of Y1 during the productive elongation prevents binding of termination factors, and stimulates recruitment of elongation factors. However, there is no structural information on how the phosphotyrosine modified CTD is recognized by these elongation factors. To investigate phosphotyrosine recognition, we employed integrative approach to structural biology–namely combination of solution nuclear magnetic resonance, small angle X-ray scattering, mass spectrometry and X-ray crystallography, supported by functional studies with point/multiple mutations. We will present the structural data for phosphotyrosine recognition within the CTD by the elongation factor, which help to decipher how this important CTD modification mark is read out by transcription factors.
Links
LQ1601, research and development projectName: CEITEC 2020 (Acronym: CEITEC2020)
Investor: Ministry of Education, Youth and Sports of the CR
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