Mucilaginibacter terrae sp. nov., isolated from Antarctic soil

J 2017

Mucilaginibacter terrae sp. nov., isolated from Antarctic soil

SEDLÁČEK, Ivo, Roman PANTŮČEK, Ivana MAŠLAŇOVÁ, Stanislava KRÁLOVÁ, Pavla HOLOCHOVÁ et. al.

Základní údaje

Originální název

Mucilaginibacter terrae sp. nov., isolated from Antarctic soil

Autoři

SEDLÁČEK, Ivo (203 Česká republika, garant, domácí), Roman PANTŮČEK (203 Česká republika, domácí), Ivana MAŠLAŇOVÁ (203 Česká republika, domácí), Stanislava KRÁLOVÁ (703 Slovensko, domácí), Pavla HOLOCHOVÁ (203 Česká republika, domácí), Eva STAŇKOVÁ (203 Česká republika, domácí), Roman SOBOTKA (203 Česká republika), Miloš BARTÁK (203 Česká republika, domácí), Hans-Jürgen BUSSE (276 Německo) a Pavel ŠVEC (203 Česká republika, domácí)

Vydání

International Journal of Systematic and Evolutionary Microbiology, London, Society for General Microbiology, 2017, 1466-5026

Další údaje

Jazyk

angličtina

Typ výsledku

Článek v odborném periodiku

Obor

10606 Microbiology

Stát vydavatele

Velká Británie a Severní Irsko

Utajení

není předmětem státního či obchodního tajemství

Odkazy

URL

Impakt faktor

Impact factor: 1.932

Kód RIV

RIV/00216224:14310/17:00097887

Organizační jednotka

Přírodovědecká fakulta

DOI

http://dx.doi.org/10.1099/ijsem.0.002240

UT WoS

000413484800049

Klíčová slova česky

Mucilaginibacter; taxonomie; popis; nový druh; klasifikace; Antarktida

Klíčová slova anglicky

Mucilaginibacter; taxonomy; description; novel species; Antarctica

Štítky

NZ, rivok

Příznaky

Mezinárodní význam, Recenzováno

Změněno: 9. 4. 2018 14:50, Ing. Nicole Zrilić

Anotace

V originále

A bacterial strain designated CCM 8645T was isolated from a soil sample collected nearby a mummified seal carcass in the northern part of James Ross Island, Antarctica. The cells were short rods, Gram-stain-negative, non-motile, catalase and oxidase positive, and produced a red-pink pigment on R2A agar. A polyphasic taxonomic approach based on 16S rRNA gene sequencing, extensive biotyping using conventional tests and commercial identification kits and chemotaxonomic analyses were applied to clarify its taxonomic position. Phylogenetic analysis based on the 16S rRNA gene placed strain CCM 8645T in the genus Mucilaginibacter with the closest relative being Mucilaginibacter daejeonensis Jip 10T , exhibiting 96.5 % 16S rRNA pairwise similarity which was clearly below the 97 % threshold value recommended for species demarcation. The major components in fatty acid profiles were Summed feature 3 (C16 : 1!7c/C16 : 1!6c), C15 : 0 iso and C17 : 0 iso 3OH. The cellular quinone content was exclusively menaquinone MK-7. The major polyamine was sym-homospermidine and predominant polar lipids were phosphatidylethanolamine and phosphatidylserine. Based on presented results, we propose a novel species for which the name Mucilaginibacter terrae sp. nov. is suggested, with the type strain CCM 8645T (=LMG 29437T ).

Návaznosti

LM2015078, projekt VaV

Název: Česká polární výzkumná infrastruktura (Akronym: CzechPolar2)

Investor: Ministerstvo školství, mládeže a tělovýchovy ČR, Czech Polar Research Infrastructure

Citovat

SEDLÁČEK, Ivo, Roman PANTŮČEK, Ivana MAŠLAŇOVÁ, Stanislava KRÁLOVÁ, Pavla HOLOCHOVÁ, Eva STAŇKOVÁ, Roman SOBOTKA, Miloš BARTÁK, Hans-Jürgen BUSSE a Pavel ŠVEC. Mucilaginibacter terrae sp. nov., isolated from Antarctic soil. International Journal of Systematic and Evolutionary Microbiology. London: Society for General Microbiology, 2017, roč. 67, č. 10, s. 4002-4007. ISSN 1466-5026. Dostupné z: https://dx.doi.org/10.1099/ijsem.0.002240.

@article{1392274,
   author = {Sedláček, Ivo and Pantůček, Roman and Mašlaňová, Ivana and Králová, Stanislava and Holochová, Pavla and Staňková, Eva and Sobotka, Roman and Barták, Miloš and Busse, HansandJürgen and Švec, Pavel},
   article_location = {London},
   article_number = {10},
   doi = {http://dx.doi.org/10.1099/ijsem.0.002240},
   keywords = {Mucilaginibacter; taxonomy; description; novel species; Antarctica},
   language = {eng},
   issn = {1466-5026},
   journal = {International Journal of Systematic and Evolutionary Microbiology},
   title = {Mucilaginibacter terrae sp. nov., isolated from Antarctic soil},
   url = {http://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.002240#tab2},
   volume = {67},
   year = {2017}
}

TY  - JOUR
ID  - 1392274
AU  - Sedláček, Ivo - Pantůček, Roman - Mašlaňová, Ivana - Králová, Stanislava - Holochová, Pavla - Staňková, Eva - Sobotka, Roman - Barták, Miloš - Busse, Hans-Jürgen - Švec, Pavel
PY  - 2017
TI  - Mucilaginibacter terrae sp. nov., isolated from Antarctic soil
JF  - International Journal of Systematic and Evolutionary Microbiology
VL  - 67
IS  - 10
SP  - 4002-4007
EP  - 4002-4007
PB  - Society for General Microbiology
SN  - 14665026
KW  - Mucilaginibacter
KW  - taxonomy
KW  - description
KW  - novel species
KW  - Antarctica
UR  - http://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.002240#tab2
L2  - http://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.002240#tab2
N2  - A bacterial strain designated CCM 8645T was isolated from a soil sample collected nearby a mummified seal carcass in the northern part of James Ross Island, Antarctica. The cells were short rods, Gram-stain-negative, non-motile, catalase and oxidase positive, and produced a red-pink pigment on R2A agar. A polyphasic taxonomic approach based on 16S rRNA gene sequencing, extensive biotyping using conventional tests and commercial identification kits and chemotaxonomic analyses were applied to clarify its taxonomic position. Phylogenetic analysis based on the 16S rRNA gene placed strain CCM 8645T in the genus Mucilaginibacter with the closest relative being Mucilaginibacter daejeonensis Jip 10T , exhibiting 96.5 % 16S rRNA pairwise similarity which was clearly below the 97 % threshold value recommended for species demarcation. The major components in fatty acid profiles were Summed feature 3 (C16 : 1!7c/C16 : 1!6c), C15 : 0 iso and C17 : 0 iso 3OH. The cellular quinone content was exclusively menaquinone MK-7. The major polyamine was sym-homospermidine and predominant polar lipids were phosphatidylethanolamine and phosphatidylserine. Based on presented results, we propose a novel species for which the name Mucilaginibacter terrae sp. nov. is suggested, with the type strain CCM 8645T (=LMG 29437T ).
ER  -

SEDLÁČEK, Ivo, Roman PANTŮČEK, Ivana MAŠLAŇOVÁ, Stanislava KRÁLOVÁ, Pavla HOLOCHOVÁ, Eva STAŇKOVÁ, Roman SOBOTKA, Miloš BARTÁK, Hans-Jürgen BUSSE a Pavel ŠVEC. Mucilaginibacter terrae sp. nov., isolated from Antarctic soil. \textit{International Journal of Systematic and Evolutionary Microbiology}. London: Society for General Microbiology, 2017, roč.~67, č.~10, s.~4002-4007. ISSN~1466-5026. Dostupné z: https://dx.doi.org/10.1099/ijsem.0.002240.

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