Detailed Information on Publication Record
2017
Pedobacter psychrophilus sp. nov., isolated from Antarctic fragmentary rock
ŠVEC, Pavel, Stanislava KRÁLOVÁ, Hans-Jürgen BUSSE, Tanita KLEINHAGAUER, Kamila KÝROVÁ et. al.Basic information
Original name
Pedobacter psychrophilus sp. nov., isolated from Antarctic fragmentary rock
Authors
ŠVEC, Pavel (203 Czech Republic, guarantor, belonging to the institution), Stanislava KRÁLOVÁ (703 Slovakia, belonging to the institution), Hans-Jürgen BUSSE (276 Germany), Tanita KLEINHAGAUER (40 Austria), Kamila KÝROVÁ (203 Czech Republic, belonging to the institution), Roman PANTŮČEK (203 Czech Republic, belonging to the institution), Ivana MAŠLAŇOVÁ (203 Czech Republic, belonging to the institution), Eva STAŇKOVÁ (203 Czech Republic, belonging to the institution), Miroslav NĚMEC (203 Czech Republic, belonging to the institution), Pavla HOLOCHOVÁ (203 Czech Republic, belonging to the institution), Miloš BARTÁK (203 Czech Republic, belonging to the institution) and Ivo SEDLÁČEK (203 Czech Republic, belonging to the institution)
Edition
International Journal of Systematic and Evolutionary Microbiology, London, MICROBIOLOGY SOC, 2017, 1466-5026
Other information
Language
English
Type of outcome
Článek v odborném periodiku
Field of Study
10606 Microbiology
Country of publisher
United Kingdom of Great Britain and Northern Ireland
Confidentiality degree
není předmětem státního či obchodního tajemství
References:
Impact factor
Impact factor: 1.932
RIV identification code
RIV/00216224:14310/17:00097889
Organization unit
Faculty of Science
UT WoS
000409533100007
Keywords (in Czech)
Pedobacter; taxonomie; klasifikace; nový druh; Antarktida
Keywords in English
Pedobacter; taxonomy; classification; description; novel species; Antarctica
Tags
International impact, Reviewed
Změněno: 10/4/2018 14:46, Ing. Nicole Zrilić
Abstract
V originále
Strain P4487AT was isolated during investigation of cultivable bacterial populations of environmental materials sampled at James Ross Island, Antarctica. It revealed Gram-stain-negative short rod-shaped cells producing a pink pigment. Phylogenetic analysis based on 16S rRNA gene sequences allocated strain P4487AT to the genus Pedobacter but showed that the strain represents a distinct intrageneric phylogenetic lineage clearly separated from remaining Pedobacter species. Phylogenetically, strain P4487AT formed a common branch with the Pedobacter arcticus and Pedobacter lignilitoris cluster while the highest value of 94.4 % 16S rRNA gene sequence similarity suggested that Pedobacter lentus is the most closely related species. Biochemical and physiological test results enabled the differentiation of strain P4487AT from all phylogenetically closely related species. Chemotaxonomic analyses of strain P4487AT showed MK-7 as the respiratory menaquinone, sym-homospermidine as the major polyamine, phosphatidylethanolamine and two unidentified lipids as the major polar lipids, presence of sphingolipids, and C16 : 1!7c/C16 : 1!6c (summed feature 3), iso-C15 : 0 and iso-C17 : 0 3-OH as the major fatty acids, all of which corresponded with characteristics of the genus Pedobacter. The results showed that strain P4487AT represents a novel species within the genus Pedobacter, for which the name Pedobacter psychrophilus sp. nov. is proposed. The type strain is P4487AT (=CCM 8644T =LMG 29436T ).
Links
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