Reanalysis of Chinese Treponema pallidum samples: all Chinese
samples cluster with SS14-like group of syphilis-causing
treponemes

J 2018

Reanalysis of Chinese Treponema pallidum samples: all Chinese samples cluster with SS14-like group of syphilis-causing treponemes

STROUHAL, Michal, Jan OPPELT, Lenka MIKALOVÁ, Natasha ARORA, Kay NIESELT et. al.

Základní údaje

Originální název

Reanalysis of Chinese Treponema pallidum samples: all Chinese samples cluster with SS14-like group of syphilis-causing treponemes

Autoři

STROUHAL, Michal (203 Česká republika, domácí), Jan OPPELT (203 Česká republika, domácí), Lenka MIKALOVÁ (203 Česká republika, domácí), Natasha ARORA (756 Švýcarsko), Kay NIESELT (276 Německo), Fernando GONZÁLEZ-CANDELAS (724 Španělsko) a David ŠMAJS (203 Česká republika)

Vydání

BMC Research Notes, London, BioMed Central Ltd. 2018, 1756-0500

Další údaje

Jazyk

angličtina

Typ výsledku

Článek v odborném periodiku

Obor

10606 Microbiology

Stát vydavatele

Velká Británie a Severní Irsko

Utajení

není předmětem státního či obchodního tajemství

Odkazy

URL

Kód RIV

RIV/00216224:14110/18:00100799

Organizační jednotka

Lékařská fakulta

DOI

http://dx.doi.org/10.1186/s13104-017-3106-7

Klíčová slova anglicky

Genome sequencing; Phylogenetic analysis; Single nucleotide variant; SyphilisTreponema pallidum

Štítky

EL OK, rivok

Příznaky

Mezinárodní význam, Recenzováno

Změněno: 25. 5. 2018 16:28, Soňa Böhmová

Anotace

V originále

Treponema pallidum subsp. pallidum (TPA) is the causative agent of syphilis. Genetic analyses of TPA reference strains and human clinical isolates have revealed two genetically distinct groups of syphilis-causing treponemes, called Nichols-like and SS14-like groups. So far, no genetic intermediates, i.e. strains containing a mixed pattern of Nichols-like and SS14-like genomic sequences, have been identified. Recently, Sun et al. (Oncotarget 2016. https://doi.org/10.18632/oncotarget.10154) described a new “phylogenetic group” (called Lineage 2) among Chinese TPA strains. This lineage exhibited a “mosaic genomic structure” of Nichols-like and SS14-like lineages.

Návaznosti

GA17-25455S, projekt VaV

Název: Studium genomů patogenních treponem na základě analýzy jednotlivých buněk

Investor: Grantová agentura ČR, Studium genomů patogenních treponem na základě analýzy jednotlivých buněk

MUNI/A/1171/2015, interní kód MU

Název: Molekulárně buněčná biologie pro biomedicínu

Investor: Masarykova univerzita, Molekulárně buněčná biologie pro biomedicínu, DO R. 2020_Kategorie A - Specifický výzkum - Studentské výzkumné projekty

Citovat

STROUHAL, Michal, Jan OPPELT, Lenka MIKALOVÁ, Natasha ARORA, Kay NIESELT, Fernando GONZÁLEZ-CANDELAS a David ŠMAJS. Reanalysis of Chinese Treponema pallidum samples: all Chinese samples cluster with SS14-like group of syphilis-causing treponemes. BMC Research Notes. London: BioMed Central Ltd., 2018, roč. 11, č. 1, s. 1-5. ISSN 1756-0500. Dostupné z: https://dx.doi.org/10.1186/s13104-017-3106-7.

@article{1405097,
   author = {Strouhal, Michal and Oppelt, Jan and Mikalová, Lenka and Arora, Natasha and Nieselt, Kay and GonzálezandCandelas, Fernando and Šmajs, David},
   article_location = {London},
   article_number = {1},
   doi = {http://dx.doi.org/10.1186/s13104-017-3106-7},
   keywords = {Genome sequencing; Phylogenetic analysis; Single nucleotide variant; SyphilisTreponema pallidum},
   language = {eng},
   issn = {1756-0500},
   journal = {BMC Research Notes},
   title = {Reanalysis of Chinese Treponema pallidum samples: all Chinese samples cluster with SS14-like group of syphilis-causing treponemes},
   url = {https://bmcresnotes.biomedcentral.com/articles/10.1186/s13104-017-3106-7},
   volume = {11},
   year = {2018}
}

TY  - JOUR
ID  - 1405097
AU  - Strouhal, Michal - Oppelt, Jan - Mikalová, Lenka - Arora, Natasha - Nieselt, Kay - González-Candelas, Fernando - Šmajs, David
PY  - 2018
TI  - Reanalysis of Chinese Treponema pallidum samples: all Chinese samples cluster with SS14-like group of syphilis-causing treponemes
JF  - BMC Research Notes
VL  - 11
IS  - 1
SP  - 1-5
EP  - 1-5
PB  - BioMed Central Ltd.
SN  - 17560500
KW  - Genome sequencing
KW  - Phylogenetic analysis
KW  - Single nucleotide variant
KW  - SyphilisTreponema pallidum
UR  - https://bmcresnotes.biomedcentral.com/articles/10.1186/s13104-017-3106-7
N2  - Treponema pallidum subsp. pallidum (TPA) is the causative agent of syphilis. Genetic analyses of TPA reference strains and human clinical isolates have revealed two genetically distinct groups of syphilis-causing treponemes, called Nichols-like and SS14-like groups. So far, no genetic intermediates, i.e. strains containing a mixed pattern of Nichols-like and SS14-like genomic sequences, have been identified. Recently, Sun et al. (Oncotarget 2016. https://doi.org/10.18632/oncotarget.10154) described a new “phylogenetic group” (called Lineage 2) among Chinese TPA strains. This lineage exhibited a “mosaic genomic structure” of Nichols-like and SS14-like lineages.
ER  -

STROUHAL, Michal, Jan OPPELT, Lenka MIKALOVÁ, Natasha ARORA, Kay NIESELT, Fernando GONZÁLEZ-CANDELAS a David ŠMAJS. Reanalysis of Chinese Treponema pallidum samples: all Chinese samples cluster with SS14-like group of syphilis-causing treponemes. \textit{BMC Research Notes}. London: BioMed Central Ltd., 2018, roč.~11, č.~1, s.~1-5. ISSN~1756-0500. Dostupné z: https://dx.doi.org/10.1186/s13104-017-3106-7.

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