Oct4-mediated reprogramming induces embryonic-like microRNA
expression signatures in human fibroblasts

J 2019

Oct4-mediated reprogramming induces embryonic-like microRNA expression signatures in human fibroblasts

PEŠKOVÁ, Lucie, Kateřina AMRUZ ČERNÁ, Jan OPPELT, Marek MRÁZ, Tomáš BÁRTA et. al.

Základní údaje

Originální název

Oct4-mediated reprogramming induces embryonic-like microRNA expression signatures in human fibroblasts

Autoři

PEŠKOVÁ, Lucie (203 Česká republika, domácí), Kateřina AMRUZ ČERNÁ (203 Česká republika, domácí), Jan OPPELT (203 Česká republika, domácí), Marek MRÁZ (203 Česká republika, domácí) a Tomáš BÁRTA (203 Česká republika, garant, domácí)

Vydání

Scientific reports, LONDON, NATURE PUBLISHING GROUP, 2019, 2045-2322

Další údaje

Jazyk

angličtina

Typ výsledku

Článek v odborném periodiku

Obor

10608 Biochemistry and molecular biology

Stát vydavatele

Velká Británie a Severní Irsko

Utajení

není předmětem státního či obchodního tajemství

Odkazy

URL

Impakt faktor

Impact factor: 3.998

Kód RIV

RIV/00216224:14110/19:00107787

Organizační jednotka

Lékařská fakulta

DOI

http://dx.doi.org/10.1038/s41598-019-52294-3

UT WoS

000493439600057

Klíčová slova anglicky

ADULT HUMAN FIBROBLASTS; PLURIPOTENT STEM-CELLS; HUMAN SOMATIC-CELLS; DIRECT CONVERSION; MOUSE FIBROBLASTS; TRANSDIFFERENTIATION; ACQUISITION; ACTIVATION; REPRESSION; PLASTICITY

Štítky

14110212, 14110517, CF BIOIT, podil, rivok

Příznaky

Mezinárodní význam, Recenzováno

Změněno: 24. 10. 2024 16:37, Ing. Marie Švancarová

Anotace

V originále

Oct4-mediated reprogramming has recently become a novel tool for the generation of various cell types from differentiated somatic cells. Although molecular mechanisms underlying this process are unknown, it is well documented that cells over-expressing Oct4 undergo transition from differentiated state into plastic state. This transition is associated with the acquisition of stem cells properties leading to epigenetically "open" state that is permissive to cell fate switch upon external stimuli. In order to contribute to our understanding of molecular mechanisms driving this process, we characterised human fibroblasts over-expressing Oct4 and performed comprehensive small-RNAseq analysis. Our analyses revealed new interesting aspects of Oct4-mediated cell plasticity induction. Cells over-expressing Oct4 lose their cell identity demonstrated by down-regulation of fibroblast-specific genes and up-regulation of epithelial genes. Interestingly, this process is associated with microRNA expression profile that is similar to microRNA profiles typically found in pluripotent stem cells. We also provide extensive network of microRNA families and clusters allowing us to precisely determine the miRNAome associated with the acquisition of Oct4-induced transient plastic state. Our data expands current knowledge of microRNA and their implications in cell fate alterations and contributing to understanding molecular mechanisms underlying it.

Návaznosti

GJ16-24004Y, projekt VaV

Název: Indukce buněčné plasticity prostřednictvím modulace mikroRNA molekul: Nový přístup pro přeprogramování buněk

Investor: Grantová agentura ČR, Indukce buněčné plasticity prostřednictvím modulace mikroRNA molekul: Nový přístup pro přeprogramování buněk

LQ1601, projekt VaV

Název: CEITEC 2020 (Akronym: CEITEC2020)

Investor: Ministerstvo školství, mládeže a tělovýchovy ČR, CEITEC 2020

90091, velká výzkumná infrastruktura

Název: NCMG

Citovat

PEŠKOVÁ, Lucie, Kateřina AMRUZ ČERNÁ, Jan OPPELT, Marek MRÁZ a Tomáš BÁRTA. Oct4-mediated reprogramming induces embryonic-like microRNA expression signatures in human fibroblasts. Scientific reports. LONDON: NATURE PUBLISHING GROUP, 2019, roč. 9, OCT 31 2019, s. 1-13. ISSN 2045-2322. Dostupné z: https://dx.doi.org/10.1038/s41598-019-52294-3.

@article{1579556,
   author = {Pešková, Lucie and Amruz Černá, Kateřina and Oppelt, Jan and Mráz, Marek and Bárta, Tomáš},
   article_location = {LONDON},
   article_number = {OCT 31 2019},
   doi = {http://dx.doi.org/10.1038/s41598-019-52294-3},
   keywords = {ADULT HUMAN FIBROBLASTS; PLURIPOTENT STEM-CELLS; HUMAN SOMATIC-CELLS; DIRECT CONVERSION; MOUSE FIBROBLASTS; TRANSDIFFERENTIATION; ACQUISITION; ACTIVATION; REPRESSION; PLASTICITY},
   language = {eng},
   issn = {2045-2322},
   journal = {Scientific reports},
   title = {Oct4-mediated reprogramming induces embryonic-like microRNA expression signatures in human fibroblasts},
   url = {http://dx.doi.org/10.1038/s41598-019-52294-3},
   volume = {9},
   year = {2019}
}

TY  - JOUR
ID  - 1579556
AU  - Pešková, Lucie - Amruz Černá, Kateřina - Oppelt, Jan - Mráz, Marek - Bárta, Tomáš
PY  - 2019
TI  - Oct4-mediated reprogramming induces embryonic-like microRNA expression signatures in human fibroblasts
JF  - Scientific reports
VL  - 9
IS  - OCT 31 2019
SP  - 1-13
EP  - 1-13
PB  - NATURE PUBLISHING GROUP
SN  - 20452322
KW  - ADULT HUMAN FIBROBLASTS
KW  - PLURIPOTENT STEM-CELLS
KW  - HUMAN SOMATIC-CELLS
KW  - DIRECT CONVERSION
KW  - MOUSE FIBROBLASTS
KW  - TRANSDIFFERENTIATION
KW  - ACQUISITION
KW  - ACTIVATION
KW  - REPRESSION
KW  - PLASTICITY
UR  - http://dx.doi.org/10.1038/s41598-019-52294-3
L2  - http://dx.doi.org/10.1038/s41598-019-52294-3
N2  - Oct4-mediated reprogramming has recently become a novel tool for the generation of various cell types from differentiated somatic cells. Although molecular mechanisms underlying this process are unknown, it is well documented that cells over-expressing Oct4 undergo transition from differentiated state into plastic state. This transition is associated with the acquisition of stem cells properties leading to epigenetically "open" state that is permissive to cell fate switch upon external stimuli. In order to contribute to our understanding of molecular mechanisms driving this process, we characterised human fibroblasts over-expressing Oct4 and performed comprehensive small-RNAseq analysis. Our analyses revealed new interesting aspects of Oct4-mediated cell plasticity induction. Cells over-expressing Oct4 lose their cell identity demonstrated by down-regulation of fibroblast-specific genes and up-regulation of epithelial genes. Interestingly, this process is associated with microRNA expression profile that is similar to microRNA profiles typically found in pluripotent stem cells. We also provide extensive network of microRNA families and clusters allowing us to precisely determine the miRNAome associated with the acquisition of Oct4-induced transient plastic state. Our data expands current knowledge of microRNA and their implications in cell fate alterations and contributing to understanding molecular mechanisms underlying it.
ER  -

PEŠKOVÁ, Lucie, Kateřina AMRUZ ČERNÁ, Jan OPPELT, Marek MRÁZ a Tomáš BÁRTA. Oct4-mediated reprogramming induces embryonic-like microRNA expression signatures in human fibroblasts. \textit{Scientific reports}. LONDON: NATURE PUBLISHING GROUP, 2019, roč.~9, OCT 31 2019, s.~1-13. ISSN~2045-2322. Dostupné z: https://dx.doi.org/10.1038/s41598-019-52294-3.

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