Origin and Evolution of Diploid and Allopolyploid Camelina
Genomes Were Accompanied by Chromosome Shattering

J 2019

Origin and Evolution of Diploid and Allopolyploid Camelina Genomes Were Accompanied by Chromosome Shattering

MANDÁKOVÁ, Terezie, Milan POUCH, J.R. BROCK, I.A. AL-SHEHBAZ, Martin LYSÁK et. al.

Základní údaje

Originální název

Origin and Evolution of Diploid and Allopolyploid Camelina Genomes Were Accompanied by Chromosome Shattering

Autoři

MANDÁKOVÁ, Terezie (203 Česká republika, domácí), Milan POUCH (203 Česká republika, domácí), J.R. BROCK (840 Spojené státy), I.A. AL-SHEHBAZ (840 Spojené státy) a Martin LYSÁK (203 Česká republika, garant, domácí)

Vydání

Plant Cell, ROCKVILLE, AMER SOC PLANT BIOLOGISTS, 2019, 1040-4651

Další údaje

Jazyk

angličtina

Typ výsledku

Článek v odborném periodiku

Obor

10611 Plant sciences, botany

Stát vydavatele

Spojené státy

Utajení

není předmětem státního či obchodního tajemství

Odkazy

URL

Impakt faktor

Impact factor: 9.618

Kód RIV

RIV/00216224:14740/19:00108120

Organizační jednotka

Středoevropský technologický institut

DOI

http://dx.doi.org/10.1105/tpc.19.00366

UT WoS

000504310900011

Klíčová slova anglicky

BRASSICACEAE PHYLOGENY; ARABIDOPSIS-THALIANA; RECENT HYBRIDIZATION; FALSE FLAX; SATIVA; CONSEQUENCES; SEQUENCE; CHROMOTHRIPSIS; POLYPLOIDY; PLANTS

Štítky

CF GEN, CF PLANT, rivok

Příznaky

Mezinárodní význam, Recenzováno

Změněno: 15. 10. 2024 09:11, Ing. Martina Blahová

Anotace

V originále

Complexes of diploid and polyploid species have formed frequently during the evolution of land plants. In false flax (Camelina sativa), an important hexaploid oilseed crop closely related to Arabidopsis (Arabidopsis thaliana), the putative parental species as well as the origin of other Camelina species remained unknown. By using bacterial artificial chromosome-based chromosome painting, genomic in situ hybridization, and multi-gene phylogenetics, we aimed to elucidate the origin and evolution of the polyploid complex. Genomes of diploid camelinas (Camelina hispida, n = 7; Camelina laxa, n = 6; and Camelina neglecta, n = 6) originated from an ancestral n = 7 genome. The allotetraploid genome of Camelina rumelica (n = 13, (NH)-H-6) arose from hybridization between diploids related to C. neglecta (n = 6, N-6) and C. hispida (n = 7, H), and the N subgenome has undergone a substantial post-polyploid fractionation. The allohexaploid genomes of C. sativa and Camelina microcarpa (n = 20, (NNH)-N-6-H-7) originated through hybridization between an auto-allotetraploid C. neglecta-like genome (n = 13, (NN7)-N-6) and C. hispida (n = 7, H), and the three subgenomes have remained stable overall since the genome merger. Remarkably, the ancestral and diploid Camelina genomes were shaped by complex chromosomal rearrangements, resembling those associated with human disorders and resulting in the origin of genome-specific shattered chromosomes.

Návaznosti

GA17-13029S, projekt VaV

Název: Chybějící souvislosti: evoluce genomu v tribu Camelineae (brukvovité)

Investor: Grantová agentura ČR, Chybějící souvislosti: evoluce genomu v tribu Camelineae (brukvovité)

LQ1601, projekt VaV

Název: CEITEC 2020 (Akronym: CEITEC2020)

Investor: Ministerstvo školství, mládeže a tělovýchovy ČR, CEITEC 2020

90091, velká výzkumná infrastruktura

Název: NCMG

Citovat

MANDÁKOVÁ, Terezie, Milan POUCH, J.R. BROCK, I.A. AL-SHEHBAZ a Martin LYSÁK. Origin and Evolution of Diploid and Allopolyploid Camelina Genomes Were Accompanied by Chromosome Shattering. Plant Cell. ROCKVILLE: AMER SOC PLANT BIOLOGISTS, 2019, roč. 31, č. 11, s. 2596-2612. ISSN 1040-4651. Dostupné z: https://dx.doi.org/10.1105/tpc.19.00366.

@article{1611618,
   author = {Mandáková, Terezie and Pouch, Milan and Brock, J.R. and AlandShehbaz, I.A. and Lysák, Martin},
   article_location = {ROCKVILLE},
   article_number = {11},
   doi = {http://dx.doi.org/10.1105/tpc.19.00366},
   keywords = {BRASSICACEAE PHYLOGENY; ARABIDOPSIS-THALIANA; RECENT HYBRIDIZATION; FALSE FLAX; SATIVA; CONSEQUENCES; SEQUENCE; CHROMOTHRIPSIS; POLYPLOIDY; PLANTS},
   language = {eng},
   issn = {1040-4651},
   journal = {Plant Cell},
   title = {Origin and Evolution of Diploid and Allopolyploid Camelina Genomes Were Accompanied by Chromosome Shattering},
   url = {http://www.plantcell.org/content/31/11/2596},
   volume = {31},
   year = {2019}
}

TY  - JOUR
ID  - 1611618
AU  - Mandáková, Terezie - Pouch, Milan - Brock, J.R. - Al-Shehbaz, I.A. - Lysák, Martin
PY  - 2019
TI  - Origin and Evolution of Diploid and Allopolyploid Camelina Genomes Were Accompanied by Chromosome Shattering
JF  - Plant Cell
VL  - 31
IS  - 11
SP  - 2596-2612
EP  - 2596-2612
PB  - AMER SOC PLANT BIOLOGISTS
SN  - 10404651
KW  - BRASSICACEAE PHYLOGENY
KW  - ARABIDOPSIS-THALIANA
KW  - RECENT HYBRIDIZATION
KW  - FALSE FLAX
KW  - SATIVA
KW  - CONSEQUENCES
KW  - SEQUENCE
KW  - CHROMOTHRIPSIS
KW  - POLYPLOIDY
KW  - PLANTS
UR  - http://www.plantcell.org/content/31/11/2596
L2  - http://www.plantcell.org/content/31/11/2596
N2  - Complexes of diploid and polyploid species have formed frequently during the evolution of land plants. In false flax (Camelina sativa), an important hexaploid oilseed crop closely related to Arabidopsis (Arabidopsis thaliana), the putative parental species as well as the origin of other Camelina species remained unknown. By using bacterial artificial chromosome-based chromosome painting, genomic in situ hybridization, and multi-gene phylogenetics, we aimed to elucidate the origin and evolution of the polyploid complex. Genomes of diploid camelinas (Camelina hispida, n = 7; Camelina laxa, n = 6; and Camelina neglecta, n = 6) originated from an ancestral n = 7 genome. The allotetraploid genome of Camelina rumelica (n = 13, (NH)-H-6) arose from hybridization between diploids related to C. neglecta (n = 6, N-6) and C. hispida (n = 7, H), and the N subgenome has undergone a substantial post-polyploid fractionation. The allohexaploid genomes of C. sativa and Camelina microcarpa (n = 20, (NNH)-N-6-H-7) originated through hybridization between an auto-allotetraploid C. neglecta-like genome (n = 13, (NN7)-N-6) and C. hispida (n = 7, H), and the three subgenomes have remained stable overall since the genome merger. Remarkably, the ancestral and diploid Camelina genomes were shaped by complex chromosomal rearrangements, resembling those associated with human disorders and resulting in the origin of genome-specific shattered chromosomes.
ER  -

MANDÁKOVÁ, Terezie, Milan POUCH, J.R. BROCK, I.A. AL-SHEHBAZ a Martin LYSÁK. Origin and Evolution of Diploid and Allopolyploid Camelina Genomes Were Accompanied by Chromosome Shattering. \textit{Plant Cell}. ROCKVILLE: AMER SOC PLANT BIOLOGISTS, 2019, roč.~31, č.~11, s.~2596-2612. ISSN~1040-4651. Dostupné z: https://dx.doi.org/10.1105/tpc.19.00366.

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