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@article{1641856,
author = {Suman, Jachym and Zubrova, Andrea and Rojikova, Katerina and Pechar, Radko and Švec, Pavel and Cajthaml, Tomas and Ulbrich, Pavel and Ridl, Jakub and Strnad, Hynek and Uhlik, Ondrej},
article_location = {LONDON},
article_number = {8},
doi = {http://dx.doi.org/10.1099/ijsem.0.003493},
keywords = {Rhodobacteraceae; Pseudogemmobacter bohemicus; 16S rRNA gene analysis; chemotaxonomic characterization; percentage of conserved proteins; heavy metals},
language = {eng},
issn = {1466-5026},
journal = {International Journal of systematic and Evolutionary Microbiology},
title = {Pseudogemmobacter bohemicus gen. nov., sp. nov., a novel taxon from the Rhodobacteraceae family isolated from heavy-metal-contaminated sludge},
url = {https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.003493#tab2},
volume = {69},
year = {2019}
}
TY - JOUR
ID - 1641856
AU - Suman, Jachym - Zubrova, Andrea - Rojikova, Katerina - Pechar, Radko - Švec, Pavel - Cajthaml, Tomas - Ulbrich, Pavel - Ridl, Jakub - Strnad, Hynek - Uhlik, Ondrej
PY - 2019
TI - Pseudogemmobacter bohemicus gen. nov., sp. nov., a novel taxon from the Rhodobacteraceae family isolated from heavy-metal-contaminated sludge
JF - International Journal of systematic and Evolutionary Microbiology
VL - 69
IS - 8
SP - 2401-2407
EP - 2401-2407
PB - MICROBIOLOGY SOC
SN - 14665026
KW - Rhodobacteraceae
KW - Pseudogemmobacter bohemicus
KW - 16S rRNA gene analysis
KW - chemotaxonomic characterization
KW - percentage of conserved proteins
KW - heavy metals
UR - https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.003493#tab2
L2 - https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.003493#tab2
N2 - The creamy white to beige, aerobic, non-motile, ovoid to rod-shaped, Gram-stain-negative strain, Cd-10(T), was isolated from heavy-metal-contaminated sludge from a decantation basin of a heavy metal processing factory based on its ability to tolerate CdCl2 in the cultivation medium. In the reconstruction of its phylogeny based on 16S rRNA gene sequences, strain Cd-10(T) clustered with species of the genera Gemmobacter, Xinfangfangia, Tabrizicola and Rhodobacter within the family Rhodobacteraceae. Its 16S rRNA gene sequence exhibited 96.32% pairwise similarity to the type strain of Xinfangfangia soli, 95.3 % to that of Gemmobacter intermedius, followed by Tabrizicola fusiformis (95.10 %), Rhodobacter sediminis (94.88 %), Gemmobacter nectariphilus and Rhodobacter capsulatus (both 94.81%). The major respiratory quinone was Q-10 accompanied by Q-9, the fatty acid profile consisted predominantly of C-18:1 omega 7C, C-18:0, C-16:0 and C-16:1 omega 7c, the major polar lipids were phosphatidylglycerol, phosphatidylmethylethanolamine, phosphatidylcholine and diphosphatidylglycerol. An analysis of the percentage of conserved proteins deduced from draft or complete genomic sequences of strain Cd-10(T) and representatives of its closest relatives suggested that strain Cd-10(T) is a member of a novel genus within the Rhodobacteraceae family for which we propose the name Pseudogemmobacter. Strain Cd-10(T) (=DSM 103618(T)=NCCB 100645(T)) is the type strain of Pseudogemmobacter bohemicus gen. nov., sp. nov., the type species of the genus Pseudogemmobacter gen. nov.
ER -
SUMAN, Jachym, Andrea ZUBROVA, Katerina ROJIKOVA, Radko PECHAR, Pavel ŠVEC, Tomas CAJTHAML, Pavel ULBRICH, Jakub RIDL, Hynek STRNAD a Ondrej UHLIK. Pseudogemmobacter bohemicus gen. nov., sp. nov., a novel taxon from the Rhodobacteraceae family isolated from heavy-metal-contaminated sludge. \textit{International Journal of systematic and Evolutionary Microbiology}. LONDON: MICROBIOLOGY SOC, 2019, roč.~69, č.~8, s.~2401-2407. ISSN~1466-5026. Dostupné z: https://dx.doi.org/10.1099/ijsem.0.003493.
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