The first case of Planococcus glaciei found in blood, a report
from the Czech Republic

J 2022

The first case of Planococcus glaciei found in blood, a report from the Czech Republic

MALIŠOVÁ, Lucia, Petra ŠPANĚLOVÁ, Ivo SEDLÁČEK, Petr PAJER, Martin MUSÍLEK et. al.

Základní údaje

Originální název

The first case of Planococcus glaciei found in blood, a report from the Czech Republic

Autoři

MALIŠOVÁ, Lucia, Petra ŠPANĚLOVÁ (garant), Ivo SEDLÁČEK (203 Česká republika, domácí), Petr PAJER, Martin MUSÍLEK, Blanka PUCHÁLKOVÁ, Vladislav JAKUBŮ, Helena ŽEMLIČKOVÁ a Renáta ŠAFRÁNKOVÁ

Vydání

Folia microbiologica, Praha, Institute of Microbiology, Academy of Sciences of the Czech Republic, 2022, 0015-5632

Další údaje

Jazyk

angličtina

Typ výsledku

Článek v odborném periodiku

Obor

10606 Microbiology

Stát vydavatele

Česká republika

Utajení

není předmětem státního či obchodního tajemství

Odkazy

URL

Impakt faktor

Impact factor: 2.600

Kód RIV

RIV/00216224:14310/22:00125131

Organizační jednotka

Přírodovědecká fakulta

DOI

http://dx.doi.org/10.1007/s12223-021-00919-4

UT WoS

000701383100001

Klíčová slova anglicky

Planococcus glaciei; identification; human clinical material; hemoculture

Štítky

rivok

Příznaky

Mezinárodní význam, Recenzováno

Změněno: 14. 1. 2022 14:09, Mgr. Marie Šípková, DiS.

Anotace

V originále

The isolation of Planococcus glaciei (designed strain CNCTC 7660) from blood of a patient with appendicitis is reported. Species P. glaciei (type strain CGMCC 1.6846( T)) was for the first time identified as an environmental bacterium acquired from a glacier in China in 2009. To reveal the identity of the isolate CNCTC 7660, the 16S rDNA sequencing and the whole genome sequencing (Illumina MiSeq, Oxford Nanopore) were performed. The level of 16S rDNA gene sequencing similarity between CNCTC 7660 and CGMCC 1.6846( T) was 99.55%. Phylogenetic analysis and average nucleotide analysis (ANI) based on the whole genome sequencing confirmed that the isolate CNCTC 7660 and CGMCC1.6846( T) had ANI value above the taxonomic threshold for belonging to the same species (95%). The G + C content of CNCTC 7660 DNA was 46.8% (mol/mol). Except for the growth temperature, strains CGMCC1.6846( T) and CNCTC 7660 were distinguished also biochemically. Due to the lack of information about the pathogenicity of P. glaciei, the possibility that it exerts pathogenicity in persons is suggested. But for understanding the nature of this species, further cases are needed.

Návaznosti

LM2018140, projekt VaV

Název: e-Infrastruktura CZ (Akronym: e-INFRA CZ)

Investor: Ministerstvo školství, mládeže a tělovýchovy ČR, e-Infrastruktura CZ

Citovat

MALIŠOVÁ, Lucia, Petra ŠPANĚLOVÁ, Ivo SEDLÁČEK, Petr PAJER, Martin MUSÍLEK, Blanka PUCHÁLKOVÁ, Vladislav JAKUBŮ, Helena ŽEMLIČKOVÁ a Renáta ŠAFRÁNKOVÁ. The first case of Planococcus glaciei found in blood, a report from the Czech Republic. Folia microbiologica. Praha: Institute of Microbiology, Academy of Sciences of the Czech Republic, 2022, roč. 67, č. 1, s. 121-127. ISSN 0015-5632. Dostupné z: https://dx.doi.org/10.1007/s12223-021-00919-4.

@article{1816443,
   author = {Mališová, Lucia and Španělová, Petra and Sedláček, Ivo and Pajer, Petr and Musílek, Martin and Puchálková, Blanka and Jakubů, Vladislav and Žemličková, Helena and Šafránková, Renáta},
   article_location = {Praha},
   article_number = {1},
   doi = {http://dx.doi.org/10.1007/s12223-021-00919-4},
   keywords = {Planococcus glaciei; identification; human clinical material; hemoculture},
   language = {eng},
   issn = {0015-5632},
   journal = {Folia microbiologica},
   title = {The first case of Planococcus glaciei found in blood, a report from the Czech Republic},
   url = {https://doi.org/10.1007/s12223-021-00919-4},
   volume = {67},
   year = {2022}
}

TY  - JOUR
ID  - 1816443
AU  - Mališová, Lucia - Španělová, Petra - Sedláček, Ivo - Pajer, Petr - Musílek, Martin - Puchálková, Blanka - Jakubů, Vladislav - Žemličková, Helena - Šafránková, Renáta
PY  - 2022
TI  - The first case of Planococcus glaciei found in blood, a report from the Czech Republic
JF  - Folia microbiologica
VL  - 67
IS  - 1
SP  - 121-127
EP  - 121-127
PB  - Institute of Microbiology, Academy of Sciences of the Czech Republic
SN  - 00155632
KW  - Planococcus glaciei
KW  - identification
KW  - human clinical material
KW  - hemoculture
UR  - https://doi.org/10.1007/s12223-021-00919-4
N2  - The isolation of Planococcus glaciei (designed strain CNCTC 7660) from blood of a patient with appendicitis is reported. Species P. glaciei (type strain CGMCC 1.6846( T)) was for the first time identified as an environmental bacterium acquired from a glacier in China in 2009. To reveal the identity of the isolate CNCTC 7660, the 16S rDNA sequencing and the whole genome sequencing (Illumina MiSeq, Oxford Nanopore) were performed. The level of 16S rDNA gene sequencing similarity between CNCTC 7660 and CGMCC 1.6846( T) was 99.55%. Phylogenetic analysis and average nucleotide analysis (ANI) based on the whole genome sequencing confirmed that the isolate CNCTC 7660 and CGMCC1.6846( T) had ANI value above the taxonomic threshold for belonging to the same species (95%). The G + C content of CNCTC 7660 DNA was 46.8% (mol/mol). Except for the growth temperature, strains CGMCC1.6846( T) and CNCTC 7660 were distinguished also biochemically. Due to the lack of information about the pathogenicity of P. glaciei, the possibility that it exerts pathogenicity in persons is suggested. But for understanding the nature of this species, further cases are needed.
ER  -

MALIŠOVÁ, Lucia, Petra ŠPANĚLOVÁ, Ivo SEDLÁČEK, Petr PAJER, Martin MUSÍLEK, Blanka PUCHÁLKOVÁ, Vladislav JAKUBŮ, Helena ŽEMLIČKOVÁ a Renáta ŠAFRÁNKOVÁ. The first case of Planococcus glaciei found in blood, a report from the Czech Republic. \textit{Folia microbiologica}. Praha: Institute of Microbiology, Academy of Sciences of the Czech Republic, 2022, roč.~67, č.~1, s.~121-127. ISSN~0015-5632. Dostupné z: https://dx.doi.org/10.1007/s12223-021-00919-4.

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