Virion structure and mechanism of genome delivery of
bacteriophage SU10 from the family Podoviridae

k 2021

Virion structure and mechanism of genome delivery of bacteriophage SU10 from the family Podoviridae

ŠIBOROVÁ, Marta, Tibor FÜZIK, Michaela PROCHÁZKOVÁ, Jiří NOVÁČEK, Martin BENEŠÍK et. al.

Základní údaje

Originální název

Virion structure and mechanism of genome delivery of bacteriophage SU10 from the family Podoviridae

Autoři

ŠIBOROVÁ, Marta (203 Česká republika, domácí), Tibor FÜZIK (703 Slovensko, domácí), Michaela PROCHÁZKOVÁ (203 Česká republika, domácí), Jiří NOVÁČEK (203 Česká republika, domácí), Martin BENEŠÍK (203 Česká republika, domácí), AS. NILSSON a Pavel PLEVKA (203 Česká republika, garant, domácí)

Vydání

1st Student Conference in Structural Biology, 2021

Další údaje

Jazyk

angličtina

Typ výsledku

Prezentace na konferencích

Obor

10607 Virology

Stát vydavatele

Česká republika

Utajení

není předmětem státního či obchodního tajemství

Odkazy

URL

Kód RIV

RIV/00216224:14740/21:00123937

Organizační jednotka

Středoevropský technologický institut

Klíčová slova anglicky

phage SU10; cryo-electron tomography

Štítky

rivok

Příznaky

Mezinárodní význam

Změněno: 24. 1. 2022 16:12, Mgr. Pavla Foltynová, Ph.D.

Anotace

V originále

Phages from the family Podoviridae use short non-contractile tails to deliver their genomes into bacteria. However, there is limited information on how the tails of Podoviridae phages penetrate cell walls of Gram-positive bacteria. Here we present the structures of virion and genome release intermediate of phage SU10. The virion of SU10 is formed by a prolate capsid with a tail decorated by long and short fibers. To infect cells SU10 binds to a cell surface by long tail fibers. Binding of short tail fibers to bacterial surface requires their rotation by 135°, which is connected to reorganization of tail proteins. In the new conformation, the short tail fibers and tail proteins form a 200 Å long nozzle. We employed cryo-electron microscopy to visualize interactions of SU10 with E. coli cell wall. Attachment of short tail fibers to the cell surface forces the tail needle, which protrudes from the baseplate, through the outer membrane of the bacterial cell. The tail needle dissociates from the baseplate. Core proteins of SU10 with transglycosylase activity are ejected from the head to degrade cell wall peptidoglycan. Other core proteins form a translocation complex that extends the nozzle across the periplasm and inner membrane. The extended nozzle together with the attached translocation complex enable delivery of SU10 DNA into bacterial cytoplasm.

Návaznosti

LL1906, projekt VaV

Název: Replikace fágů v bakteriálním biofilmu

Investor: Ministerstvo školství, mládeže a tělovýchovy ČR, Replikace fágů v bakteriálním biofilmu

Citovat

ŠIBOROVÁ, Marta, Tibor FÜZIK, Michaela PROCHÁZKOVÁ, Jiří NOVÁČEK, Martin BENEŠÍK, AS. NILSSON a Pavel PLEVKA. Virion structure and mechanism of genome delivery of bacteriophage SU10 from the family Podoviridae. In 1st Student Conference in Structural Biology. 2021.

@proceedings{1826507,
   author = {Šiborová, Marta and Füzik, Tibor and Procházková, Michaela and Nováček, Jiří and Benešík, Martin and Nilsson, AS. and Plevka, Pavel},
   booktitle = {1st Student Conference in Structural Biology},
   keywords = {phage SU10; cryo-electron tomography},
   language = {eng},
   title = {Virion structure and mechanism of genome delivery of bacteriophage SU10 from the family Podoviridae},
   url = {https://cssb.structbio.org/wp-content/uploads/1stSCSB_booklet_fin.pdf},
   year = {2021}
}

TY  - CONF
ID  - 1826507
AU  - Šiborová, Marta - Füzik, Tibor - Procházková, Michaela - Nováček, Jiří - Benešík, Martin - Nilsson, AS. - Plevka, Pavel
PY  - 2021
TI  - Virion structure and mechanism of genome delivery of bacteriophage SU10 from the family Podoviridae
KW  - phage SU10
KW  - cryo-electron tomography
UR  - https://cssb.structbio.org/wp-content/uploads/1stSCSB_booklet_fin.pdf
N2  - Phages from the family Podoviridae use short non-contractile tails to deliver their genomes into bacteria. However, there is limited information on how the tails of Podoviridae phages penetrate cell walls of Gram-positive bacteria. Here we present the structures of virion and genome release intermediate of phage SU10. The virion of SU10 is formed by a prolate capsid with a tail decorated by long and short fibers. To infect cells SU10 binds to a cell surface by long tail fibers. Binding of short tail fibers to bacterial surface requires their rotation by 135°, which is connected to reorganization of tail proteins. In the new conformation, the short tail fibers and tail proteins form a 200 Å long nozzle. We employed cryo-electron microscopy to visualize interactions of SU10 with E. coli cell wall. Attachment of short tail fibers to the cell surface forces the tail needle, which protrudes from the baseplate, through the outer membrane of the bacterial cell. The tail needle dissociates from the baseplate. Core proteins of SU10 with transglycosylase activity are ejected from the head to degrade cell wall peptidoglycan. Other core proteins form a translocation complex that extends the nozzle across the periplasm and inner membrane. The extended nozzle together with the attached translocation complex enable delivery of SU10 DNA into bacterial cytoplasm.
ER  -

ŠIBOROVÁ, Marta, Tibor FÜZIK, Michaela PROCHÁZKOVÁ, Jiří NOVÁČEK, Martin BENEŠÍK, AS. NILSSON a Pavel PLEVKA. Virion structure and mechanism of genome delivery of bacteriophage SU10 from the family Podoviridae. In \textit{1st Student Conference in Structural Biology}. 2021.

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