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@article{2236338,
author = {Midlik, Adam and Hutařová Vařeková, Ivana and Hutař, Jan and Chareshneu, Aliaksei and Berka, Karel and Svobodová, Radka},
article_number = {14},
doi = {http://dx.doi.org/10.1093/bioinformatics/btac384},
keywords = {protein family; OverProt},
language = {eng},
issn = {1367-4803},
journal = {Bioinformatics},
title = {OverProt: secondary structure consensus for protein families},
url = {https://academic.oup.com/bioinformatics/article/38/14/3648/6604272},
volume = {38},
year = {2022}
}
TY - JOUR
ID - 2236338
AU - Midlik, Adam - Hutařová Vařeková, Ivana - Hutař, Jan - Chareshneu, Aliaksei - Berka, Karel - Svobodová, Radka
PY - 2022
TI - OverProt: secondary structure consensus for protein families
JF - Bioinformatics
VL - 38
IS - 14
SP - 3648-3650
EP - 3648-3650
PB - Oxford University Press
SN - 13674803
KW - protein family
KW - OverProt
UR - https://academic.oup.com/bioinformatics/article/38/14/3648/6604272
N2 - Every protein family has a set of characteristic secondary structures. However, due to individual variations, a single structure is not enough to represent the whole family. OverProt can create a secondary structure consensus, showing the general fold of the family as well as its variation. Our server provides precomputed results for all CATH superfamilies and user-defined computations, visualized by an interactive viewer, which shows the secondary structure element type, length, frequency of occurrence, spatial variability and beta-connectivity.
ER -
MIDLIK, Adam, Ivana HUTAŘOVÁ VAŘEKOVÁ, Jan HUTAŘ, Aliaksei CHARESHNEU, Karel BERKA a Radka SVOBODOVÁ. OverProt: secondary structure consensus for protein families. \textit{Bioinformatics}. Oxford University Press, 2022, roč.~38, č.~14, s.~3648-3650. ISSN~1367-4803. Dostupné z: https://dx.doi.org/10.1093/bioinformatics/btac384.
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