NOMAD: A distributed web-based platform for managing materials
science research data

J 2023

NOMAD: A distributed web-based platform for managing materials science research data

SCHEIDGEN, Markus, Lauri HIMANEN, Alvin Noe LADINES, David SIKTER, Mohammad NAKHAEE et. al.

Základní údaje

Originální název

NOMAD: A distributed web-based platform for managing materials science research data

Autoři

Vydání

Journal of Open Source Software, Journal of Open Source Software, 2023, 2475-9066

Další údaje

Jazyk

angličtina

Typ výsledku

Článek v odborném periodiku

Stát vydavatele

Spojené státy

Utajení

není předmětem státního či obchodního tajemství

Odkazy

URL

Organizační jednotka

Přírodovědecká fakulta

DOI

http://dx.doi.org/10.21105/joss.05388

Klíčová slova anglicky

materials science; data management; electronic lab notebook; FAIR; Python; javascript; database

Příznaky

Mezinárodní význam, Recenzováno

Změněno: 11. 12. 2023 15:59, Mgr. Marie Šípková, DiS.

Anotace

V originále

Materials science research is becoming increasingly data-driven, which requires more effort to manage, share, and publish data. NOMAD is a web-based application that provides data management for materials science research data. In addition to core data management functions like uploading and sharing files, NOMAD allows for entering structured data using customizable forms providing the software with electronic laboratory notebook (ELN) functionalities. It automatically extracts rich meta-data from supported file formats, normalizes and converts data from these formats, and provides a faceted search with materials science-specific filters based on extracted meta-data. NOMAD integrates data analysis and machine learning tools. Installations of NOMAD can be connected to share data between research institutes and can publish data to an open central NOMAD service. The NOMAD software is distributed as a Docker image to create data management services and as a Python package to automate the client’s use of these services.

Citovat

SCHEIDGEN, Markus, Lauri HIMANEN, Alvin Noe LADINES, David SIKTER, Mohammad NAKHAEE, Ádám FEKETE, Theodore CHANG, Amir GOLPARVAR, José A. MÁRQUEZ, Sandor BROCKHAUSER, Sebastian BRÜCKNER, Luca M. GHIRINGHELLI, Felix DIETRICH, Daniel LEHMBERG, Thea DENELL, Andrea ALBINO, Hampus NÄSSTRÖM, Sherjeel SHABIH, Florian DOBENER, Markus KÜHBACH, Rubel MOZUMDER, Joseph F. RUDZINSKI, Nathan DAELMAN, José M. PIZARRO, Martin KUBAN, Cuauhtemoc SALAZAR, Pavel ONDRAČKA, Hans-Joachim BUNGARTZ a Claudia DRAXL. NOMAD: A distributed web-based platform for managing materials science research data. Journal of Open Source Software. Journal of Open Source Software, 2023, roč. 8, č. 90, s. 1-4. ISSN 2475-9066. Dostupné z: https://dx.doi.org/10.21105/joss.05388.

@article{2347244,
   author = {Scheidgen, Markus and Himanen, Lauri and Ladines, Alvin Noe and Sikter, David and Nakhaee, Mohammad and Fekete, Ádám and Chang, Theodore and Golparvar, Amir and Márquez, José A. and Brockhauser, Sandor and Brückner, Sebastian and Ghiringhelli, Luca M. and Dietrich, Felix and Lehmberg, Daniel and Denell, Thea and Albino, Andrea and Näsström, Hampus and Shabih, Sherjeel and Dobener, Florian and Kühbach, Markus and Mozumder, Rubel and Rudzinski, Joseph F. and Daelman, Nathan and Pizarro, José M. and Kuban, Martin and Salazar, Cuauhtemoc and Ondračka, Pavel and Bungartz, HansandJoachim and Draxl, Claudia},
   article_number = {90},
   doi = {http://dx.doi.org/10.21105/joss.05388},
   keywords = {materials science; data management; electronic lab notebook; FAIR; Python; javascript; database},
   language = {eng},
   issn = {2475-9066},
   journal = {Journal of Open Source Software},
   title = {NOMAD: A distributed web-based platform for managing materials science research data},
   url = {https://doi.org/10.21105/joss.05388},
   volume = {8},
   year = {2023}
}

TY  - JOUR
ID  - 2347244
AU  - Scheidgen, Markus - Himanen, Lauri - Ladines, Alvin Noe - Sikter, David - Nakhaee, Mohammad - Fekete, Ádám - Chang, Theodore - Golparvar, Amir - Márquez, José A. - Brockhauser, Sandor - Brückner, Sebastian - Ghiringhelli, Luca M. - Dietrich, Felix - Lehmberg, Daniel - Denell, Thea - Albino, Andrea - Näsström, Hampus - Shabih, Sherjeel - Dobener, Florian - Kühbach, Markus - Mozumder, Rubel - Rudzinski, Joseph F. - Daelman, Nathan - Pizarro, José M. - Kuban, Martin - Salazar, Cuauhtemoc - Ondračka, Pavel - Bungartz, Hans-Joachim - Draxl, Claudia
PY  - 2023
TI  - NOMAD: A distributed web-based platform for managing materials science research data
JF  - Journal of Open Source Software
VL  - 8
IS  - 90
SP  - 1-4
EP  - 1-4
PB  - Journal of Open Source Software
SN  - 24759066
KW  - materials science
KW  - data management
KW  - electronic lab notebook
KW  - FAIR
KW  - Python
KW  - javascript
KW  - database
UR  - https://doi.org/10.21105/joss.05388
N2  - Materials science research is becoming increasingly data-driven, which requires more effort to manage, share, and publish data. NOMAD is a web-based application that provides data management for materials science research data. In addition to core data management functions like uploading and sharing files, NOMAD allows for entering structured data using customizable forms providing the software with electronic laboratory notebook (ELN) functionalities. It automatically extracts rich meta-data from supported file formats, normalizes and converts data from these formats, and provides a faceted search with materials science-specific filters based on extracted meta-data. NOMAD integrates data analysis and machine learning tools. Installations of NOMAD can be connected to share data between research institutes and can publish data to an open central NOMAD service. The NOMAD software is distributed as a Docker image to create data management services and as a Python package to automate the client’s use of these services.
ER  -

SCHEIDGEN, Markus, Lauri HIMANEN, Alvin Noe LADINES, David SIKTER, Mohammad NAKHAEE, Ádám FEKETE, Theodore CHANG, Amir GOLPARVAR, José A. MÁRQUEZ, Sandor BROCKHAUSER, Sebastian BRÜCKNER, Luca M. GHIRINGHELLI, Felix DIETRICH, Daniel LEHMBERG, Thea DENELL, Andrea ALBINO, Hampus NÄSSTRÖM, Sherjeel SHABIH, Florian DOBENER, Markus KÜHBACH, Rubel MOZUMDER, Joseph F. RUDZINSKI, Nathan DAELMAN, José M. PIZARRO, Martin KUBAN, Cuauhtemoc SALAZAR, Pavel ONDRAČKA, Hans-Joachim BUNGARTZ a Claudia DRAXL. NOMAD: A distributed web-based platform for managing materials science research data. \textit{Journal of Open Source Software}. Journal of Open Source Software, 2023, roč.~8, č.~90, s.~1-4. ISSN~2475-9066. Dostupné z: https://dx.doi.org/10.21105/joss.05388.

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