HAŠANOVÁ, Zdenka, Veronika KLÁPŠŤOVÁ, Odil PORRUA, Richard ŠTEFL and Marek ŠEBESTA. Human senataxin is a bona fide R-loop resolving enzyme and transcription termination factor. Nucleic Acids Research. Oxford University Press, 2023, vol. 51, No 6, p. 2818-2837. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkad092.
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Basic information
Original name Human senataxin is a bona fide R-loop resolving enzyme and transcription termination factor
Authors HAŠANOVÁ, Zdenka (703 Slovakia, belonging to the institution), Veronika KLÁPŠŤOVÁ (203 Czech Republic, belonging to the institution), Odil PORRUA, Richard ŠTEFL (203 Czech Republic, guarantor, belonging to the institution) and Marek ŠEBESTA (703 Slovakia, belonging to the institution).
Edition Nucleic Acids Research, Oxford University Press, 2023, 0305-1048.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 10608 Biochemistry and molecular biology
Country of publisher United Kingdom of Great Britain and Northern Ireland
Confidentiality degree is not subject to a state or trade secret
WWW URL
Impact factor Impact factor: 14.900 in 2022
RIV identification code RIV/00216224:14740/23:00132763
Organization unit Central European Institute of Technology
Doi http://dx.doi.org/10.1093/nar/gkad092
UT WoS 000942750600001
Keywords in English RNA-POLYMERASE-II; OCULOMOTOR APRAXIA TYPE-2; SACCHAROMYCES-CEREVISIAE SEN1; GENOME INSTABILITY; REPLICATION CONFLICTS; RNA/DNA HYBRIDS; PAUSE SITES; INFO-RNA; HELICASE; ATAXIA
Tags CF BIC, CF PROT, rivok
Tags International impact, Reviewed
Changed by Changed by: Mgr. Eva Dubská, učo 77638. Changed: 6/4/2024 19:32.
Abstract
Prolonged pausing of the transcription machinery may lead to the formation of three-stranded nucleic acid structures, called R-loops, typically resulting from the annealing of the nascent RNA with the template DNA. Unscheduled persistence of R-loops and RNA polymerases may interfere with transcription itself and other essential processes such as DNA replication and repair. Senataxin (SETX) is a putative helicase, mutated in two neurodegenerative disorders, which has been implicated in the control of R-loop accumulation and in transcription termination. However, understanding the precise role of SETX in these processes has been precluded by the absence of a direct characterisation of SETX biochemical activities. Here, we purify and characterise the helicase domain of SETX in parallel with its yeast orthologue, Sen1. Importantly, we show that SETX is a bona fide helicase with the ability to resolve R-loops. Furthermore, SETX has retained the transcription termination activity of Sen1 but functions in a species-specific manner. Finally, subsequent characterisation of two SETX variants harbouring disease-associated mutations shed light into the effect of such mutations on SETX folding and biochemical properties. Altogether, these results broaden our understanding of SETX function in gene expression and the maintenance of genome integrity and provide clues to elucidate the molecular basis of SETX-associated neurodegenerative diseases.
Links
EF18_046/0015974, research and development projectName: Modernizace České infrastruktury pro integrativní strukturní biologii
GM21-10464M, research and development projectName: Strukturní charakterizace interakcí mezi transkripcí a opravou DNA
Investor: Czech Science Foundation
LM2018127, research and development projectName: Česká infrastruktura pro integrativní strukturní biologii (Acronym: CIISB)
Investor: Ministry of Education, Youth and Sports of the CR
649030, interní kód MUName: DECOR - Dynamic assembly and exchange of RNA polymerase II CTD factors (Acronym: DECOR)
Investor: European Union, DECOR, ERC (Excellent Science)
90242, large research infrastructuresName: CIISB III
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