LELKES, Edit, Jitka JEMELKOVÁ, Marcela HOLÁ, Barbora ŠTEFANOVIE, Peter KOLESÁR, Radka VÁGNEROVÁ, Eva DVOŘÁK TOMAŠTÍKOVÁ, Aleš PEČINKA, Karel J. ANGELIS and Jan PALEČEK. Characterization of the conserved features of the NSE6 subunit of the Physcomitrium patens PpSMC5/6 complex. PLANT JOURNAL. ENGLAND: WILEY, 2023, vol. 115, No 4, p. 1084-1099. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.16282.
Other formats:   BibTeX LaTeX RIS
Basic information
Original name Characterization of the conserved features of the NSE6 subunit of the Physcomitrium patens PpSMC5/6 complex
Name in Czech Charakterizace konzervovaných vlastností NSE6 podjednotky Physcomitrium patens komplexu PpSMC5/6
Authors LELKES, Edit (703 Slovakia, belonging to the institution), Jitka JEMELKOVÁ (203 Czech Republic, belonging to the institution), Marcela HOLÁ (203 Czech Republic), Barbora ŠTEFANOVIE (703 Slovakia, belonging to the institution), Peter KOLESÁR (703 Slovakia, belonging to the institution), Radka VÁGNEROVÁ (203 Czech Republic), Eva DVOŘÁK TOMAŠTÍKOVÁ (203 Czech Republic), Aleš PEČINKA (203 Czech Republic), Karel J. ANGELIS (203 Czech Republic) and Jan PALEČEK (203 Czech Republic, guarantor, belonging to the institution).
Edition PLANT JOURNAL, ENGLAND, WILEY, 2023, 0960-7412.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 10608 Biochemistry and molecular biology
Country of publisher United Kingdom of Great Britain and Northern Ireland
Confidentiality degree is not subject to a state or trade secret
WWW URL
Impact factor Impact factor: 7.200 in 2022
RIV identification code RIV/00216224:14310/23:00132792
Organization unit Faculty of Science
Doi http://dx.doi.org/10.1111/tpj.16282
UT WoS 000995683100001
Keywords in English SMC5/6 complex; NSE5/SNI1/SLF1/SIMC1; NSE6/ASAP1/SLF2/KRE29; CANIN domain; DNA damage repair; plant development; Physcomitrium patens
Tags protein-protein interactions, rivok, SMC5-6 complex
Tags International impact, Reviewed
Changed by Changed by: Mgr. Marie Šípková, DiS., učo 437722. Changed: 19/1/2024 10:43.
Abstract
Structural maintenance of chromosomes (SMC) complexes are molecular machines ensuring chromatin organization at higher levels. They play direct roles in cohesion, condensation, replication, transcription, and DNA repair. Their cores are composed of long-armed SMC, kleisin, and kleisin-associated subunits. Additional factors, like NSE6 within SMC5/6, bind to SMC core complexes and regulate their activities. In the human HsNSE6/SLF2, we recently identified a new CANIN domain. Here we tracked down its sequence homology to lower plants, selected the bryophyte Physcomitrium patens, and analyzed PpNSE6 protein-protein interactions to explore its conservation in detail. We identified a previously unrecognized core sequence motif conserved from yeasts to humans within the NSE6 CANIN domain. This motif mediates the interaction between NSE6 and its NSE5 partner in yeasts and plants. In addition, the CANIN domain and its preceding PpNSE6 sequences bind both PpSMC5 and PpSMC6 arms. Interestingly, we mapped the PpNSE6-binding site at the PpSMC5 arm right next to the PpNSE2-binding surface. The position of NSE6 at SMC arms suggests its role in the regulation of SMC5/6 dynamics. Consistent with the regulatory role of NSE6 subunits, Ppnse6 mutant lines were viable and sensitive to the DNA-damaging drug bleomycin and lost a large portion of rDNA copies. These moss mutants also exhibited reduced growth and developmental aberrations. Altogether, our data showed the conserved function of the NSE6 subunit and architecture of the SMC5/6 complex across species.
Links
GA20-05095S, research and development projectName: Úloha komplexu SMC5/6 a jeho interakčních partnerů v opravě poškozené DNA (Acronym: SMC5/6)
Investor: Czech Science Foundation
LM2018129, research and development projectName: Národní infrastruktura pro biologické a medicínské zobrazování Czech-BioImaging
Investor: Ministry of Education, Youth and Sports of the CR
MUNI/R/1142/2021, interní kód MUName: Visualization of the 3D structure of chromatin
Investor: Masaryk University, CAREER RESTART
MUNI/R/1262/2022, interní kód MUName: Vztah mezi opravou DNA a transkripcí
Investor: Masaryk University, Crosstalk between DNA repair and transcription, CAREER RESTART
PrintDisplayed: 4/9/2024 04:32