The Electron Microscopy Data Bank (EMDB) is the global public archive of three-dimensional electron microscopy (3DEM) maps of biological specimens derived from transmission electron microscopy experiments. As of 2021, EMDB is managed by the Worldwide Protein Data Bank consortium (wwPDB; wwpdb.org) as a wwPDB Core Archive, and the EMDB team is a core member of the consortium. Today, EMDB houses over 30 000 entries with maps containing macromolecules, complexes, viruses, organelles and cells. Herein, we provide an overview of the rapidly growing EMDB archive, including its current holdings, recent updates, and future plans.
TURNER, Jack, Sanja ABBOTT, Neli FONSECA, Lucas CARRIJO, Amudha Kumari DURAISAMY, Osman SALIH, Zhe WANG, Gerard J KLEYWEGT, Kyle L MORRIS, Ardan PATWARDHAN, Stephen K BURLEY, Gregg CRICHLOW, Zukang FENG, Justin W FLATT, Sutapa GHOSH, Brian P HUDSON, Catherine L LAWSON, Yuhe LIANG, Ezra PEISACH, Irina PERSIKOVA, Monica SEKHARAN, Chenghua SHAO, Jasmine YOUNG, Sameer VELANKAR, David ARMSTRONG, Marcus BAGE, Wesley Morellato BUENO, Genevieve EVANS, Romana GÁBOROVÁ, Sudakshina GANGULY, Deepti GUPTA, Deborah HARRUS, Ahsan TANWEER, Manju BANSAL, Vetriselvi RANGANNAN, Genji KURISU, Hasumi CHO, Yasuyo IKEGAWA, Yumiko KENGAKU, Ju Yaen KIM, Satomi NIWA, Junko SATO, Ayako TAKUWA, Jian YU, Jeffrey C HOCH, Kumaran BASKARAN, Wenqing XU, Weizhe ZHANG a Xiaodan MA. EMDB-the Electron Microscopy Data Bank. Nucleic acids research. Oxford: Oxford University Press, 2023, roč. 52, Jan, s. 456-465. ISSN 0305-1048. Dostupné z: https://dx.doi.org/10.1093/nar/gkad1019.
@article{2377738, author = {Turner, Jack and Abbott, Sanja and Fonseca, Neli and Carrijo, Lucas and Duraisamy, Amudha Kumari and Salih, Osman and Wang, Zhe and Kleywegt, Gerard J and Morris, Kyle L and Patwardhan, Ardan and Burley, Stephen K and Crichlow, Gregg and Feng, Zukang and Flatt, Justin W and Ghosh, Sutapa and Hudson, Brian P and Lawson, Catherine L and Liang, Yuhe and Peisach, Ezra and Persikova, Irina and Sekharan, Monica and Shao, Chenghua and Young, Jasmine and Velankar, Sameer and Armstrong, David and Bage, Marcus and Bueno, Wesley Morellato and Evans, Genevieve and Gáborová, Romana and Ganguly, Sudakshina and Gupta, Deepti and Harrus, Deborah and Tanweer, Ahsan and Bansal, Manju and Rangannan, Vetriselvi and Kurisu, Genji and Cho, Hasumi and Ikegawa, Yasuyo and Kengaku, Yumiko and Kim, Ju Yaen and Niwa, Satomi and Sato, Junko and Takuwa, Ayako and Yu, Jian and Hoch, Jeffrey C and Baskaran, Kumaran and Xu, Wenqing and Zhang, Weizhe and Ma, Xiaodan}, article_location = {Oxford}, article_number = {Jan}, doi = {http://dx.doi.org/10.1093/nar/gkad1019}, keywords = {Electron Microscopy Data Bank; three-dimensional electron microscopy; PDB; EMDB}, language = {eng}, issn = {0305-1048}, journal = {Nucleic acids research}, title = {EMDB-the Electron Microscopy Data Bank}, url = {https://academic.oup.com/nar/article/52/D1/D456/7442543?login=false}, volume = {52}, year = {2023} }
TY - JOUR ID - 2377738 AU - Turner, Jack - Abbott, Sanja - Fonseca, Neli - Carrijo, Lucas - Duraisamy, Amudha Kumari - Salih, Osman - Wang, Zhe - Kleywegt, Gerard J - Morris, Kyle L - Patwardhan, Ardan - Burley, Stephen K - Crichlow, Gregg - Feng, Zukang - Flatt, Justin W - Ghosh, Sutapa - Hudson, Brian P - Lawson, Catherine L - Liang, Yuhe - Peisach, Ezra - Persikova, Irina - Sekharan, Monica - Shao, Chenghua - Young, Jasmine - Velankar, Sameer - Armstrong, David - Bage, Marcus - Bueno, Wesley Morellato - Evans, Genevieve - Gáborová, Romana - Ganguly, Sudakshina - Gupta, Deepti - Harrus, Deborah - Tanweer, Ahsan - Bansal, Manju - Rangannan, Vetriselvi - Kurisu, Genji - Cho, Hasumi - Ikegawa, Yasuyo - Kengaku, Yumiko - Kim, Ju Yaen - Niwa, Satomi - Sato, Junko - Takuwa, Ayako - Yu, Jian - Hoch, Jeffrey C - Baskaran, Kumaran - Xu, Wenqing - Zhang, Weizhe - Ma, Xiaodan PY - 2023 TI - EMDB-the Electron Microscopy Data Bank JF - Nucleic acids research VL - 52 IS - Jan SP - 456-465 EP - 456-465 PB - Oxford University Press SN - 03051048 KW - Electron Microscopy Data Bank KW - three-dimensional electron microscopy KW - PDB KW - EMDB UR - https://academic.oup.com/nar/article/52/D1/D456/7442543?login=false N2 - The Electron Microscopy Data Bank (EMDB) is the global public archive of three-dimensional electron microscopy (3DEM) maps of biological specimens derived from transmission electron microscopy experiments. As of 2021, EMDB is managed by the Worldwide Protein Data Bank consortium (wwPDB; wwpdb.org) as a wwPDB Core Archive, and the EMDB team is a core member of the consortium. Today, EMDB houses over 30 000 entries with maps containing macromolecules, complexes, viruses, organelles and cells. Herein, we provide an overview of the rapidly growing EMDB archive, including its current holdings, recent updates, and future plans. ER -
TURNER, Jack, Sanja ABBOTT, Neli FONSECA, Lucas CARRIJO, Amudha Kumari DURAISAMY, Osman SALIH, Zhe WANG, Gerard J KLEYWEGT, Kyle L MORRIS, Ardan PATWARDHAN, Stephen K BURLEY, Gregg CRICHLOW, Zukang FENG, Justin W FLATT, Sutapa GHOSH, Brian P HUDSON, Catherine L LAWSON, Yuhe LIANG, Ezra PEISACH, Irina PERSIKOVA, Monica SEKHARAN, Chenghua SHAO, Jasmine YOUNG, Sameer VELANKAR, David ARMSTRONG, Marcus BAGE, Wesley Morellato BUENO, Genevieve EVANS, Romana GÁBOROVÁ, Sudakshina GANGULY, Deepti GUPTA, Deborah HARRUS, Ahsan TANWEER, Manju BANSAL, Vetriselvi RANGANNAN, Genji KURISU, Hasumi CHO, Yasuyo IKEGAWA, Yumiko KENGAKU, Ju Yaen KIM, Satomi NIWA, Junko SATO, Ayako TAKUWA, Jian YU, Jeffrey C HOCH, Kumaran BASKARAN, Wenqing XU, Weizhe ZHANG a Xiaodan MA. EMDB-the Electron Microscopy Data Bank. \textit{Nucleic acids research}. Oxford: Oxford University Press, 2023, roč.~52, Jan, s.~456-465. ISSN~0305-1048. Dostupné z: https://dx.doi.org/10.1093/nar/gkad1019.