D 2002

Molecular dynamics of the 5S rRNA loop E

RÉBLOVÁ, Kamila; Naděžda ŠPAČKOVÁ; Richard ŠTEFL; Kristina CSASZAR; Jaroslav KOČA et. al.

Basic information

Original name

Molecular dynamics of the 5S rRNA loop E

Authors

RÉBLOVÁ, Kamila (203 Czech Republic); Naděžda ŠPAČKOVÁ (203 Czech Republic); Richard ŠTEFL (203 Czech Republic); Kristina CSASZAR (840 United States of America); Jaroslav KOČA (203 Czech Republic); Neocles LEONTIS (840 United States of America) and Jiří ŠPONER (203 Czech Republic, guarantor)

Edition

Brno, Chemometrics, p. 18-18, 1 pp. 2002

Publisher

Chemometrics VI.

Other information

Language

English

Type of outcome

Proceedings paper

Field of Study

10610 Biophysics

Country of publisher

Czech Republic

Confidentiality degree

is not subject to a state or trade secret

RIV identification code

RIV/00216224:14310/02:00007242

Organization unit

Faculty of Science

Keywords in English

molecular dynamics simulations; Loop E motifs; non-Watson-Crick base pairs; ordered hydration; 5S rRNA.
Changed: 26/1/2007 17:13, prof. Mgr. Richard Štefl, Ph.D.

Abstract

In the original language

Internal loops are common elements of RNA secondary structure. They often form binding sites for metals, proteins and other RNAs. To under-stand the effects of internal loops on RNA structure and function, we have carried out molecular dynamics simula-tions on two RNA Eloop motifs

Links

LN00A016, research and development project
Name: BIOMOLEKULÁRNÍ CENTRUM
Investor: Ministry of Education, Youth and Sports of the CR, Biomolecular Center