RÉBLOVÁ, Kamila, Naděžda ŠPAČKOVÁ, Judit ŠPONER, Jaroslav KOČA and Jiři ŠPONER. Molecular dynamics simulations of RNA kissing loop motifs reveal structural dynamics and formation of cation-binding pockets. Nucleic Acids Research. Oxford University Press, 2003, vol. 31, No 23, p. 6942-6952. ISSN 0006-3465.
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Basic information
Original name Molecular dynamics simulations of RNA kissing loop motifs reveal structural dynamics and formation of cation-binding pockets
Authors RÉBLOVÁ, Kamila (203 Czech Republic, guarantor), Naděžda ŠPAČKOVÁ (203 Czech Republic), Judit ŠPONER (203 Czech Republic), Jaroslav KOČA (203 Czech Republic) and Jiři ŠPONER (203 Czech Republic).
Edition Nucleic Acids Research, Oxford University Press, 2003, 0006-3465.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 10610 Biophysics
Country of publisher Czech Republic
Confidentiality degree is not subject to a state or trade secret
RIV identification code RIV/00216224:14310/03:00009301
Organization unit Faculty of Science
Keywords in English RNA; kissing loop motifs; molecular dynamics; cation-binding pockets
Tags cation-binding pockets, kissing loop motifs, molecular dynamics, RNA
Changed by Changed by: prof. RNDr. Jaroslav Koča, DrSc., učo 610. Changed: 22/11/2004 16:05.
Abstract
Loop-loop interactions between RNA hairpins represent an important class of RNA-RNA recognition motifs. These `kissing-loop' complexes participate in antisense regulation of a variety of cellular processes in prokaryotic cells and in bacteriophages. To under-stand the function of kissing complexes, we have carried out molecular dynamics simulations on two types of RNA kissing structures.
Links
LN00A016, research and development projectName: BIOMOLEKULÁRNÍ CENTRUM
Investor: Ministry of Education, Youth and Sports of the CR, Biomolecular Center
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