Image analysis of the movement of sub-cellular structures
| MATULA, Petr, Vladan ONDŘEJ and Stanislav KOZUBEK. Image analysis of the movement of sub-cellular structures. In Biophysics of the Genome. First Edition 2004. Brno: Masaryk University, 2004, p. 62-65. ISBN 80-210-3560-9. |
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| Basic information | |
|---|---|
| Original name | Image analysis of the movement of sub-cellular structures |
| Name in Czech | Obrazová analýza pohybu subcelulárních struktur |
| Authors | MATULA, Petr (203 Czech Republic), Vladan ONDŘEJ (203 Czech Republic) and Stanislav KOZUBEK (203 Czech Republic, guarantor). |
| Edition | First Edition 2004. Brno, Biophysics of the Genome, p. 62-65, 4 pp. 2004. |
| Publisher | Masaryk University |
| Other information | |
|---|---|
| Original language | English |
| Type of outcome | Proceedings paper |
| Field of Study | 20200 2.2 Electrical engineering, Electronic engineering, Information engineering |
| Country of publisher | Czech Republic |
| Confidentiality degree | is not subject to a state or trade secret |
| RIV identification code | RIV/00216224:14330/04:00009704 |
| Organization unit | Faculty of Informatics |
| ISBN | 80-210-3560-9 |
| Keywords in English | image analysiss |
| Tags | image analysiss |
| Tags | International impact |
| Changed by | Changed by: doc. RNDr. Petr Matula, Ph.D., učo 3019. Changed: 2/6/2010 15:22. |
| Abstract |
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| Analysis of time-lapse series of images of living cells requires automation. This contribution concerns the main features of the software package developed for this purpose in our laboratory. Some improvements of our recently published method for tracking of sub-cellular structures based on graph theory are presented. The behaviour of the method is evaluated on images of centromeric heterochromatin defined by HP1beta-GFP fusion protein. The results show that the method is very well applicable for this type of data. |
| Abstract (in Czech) |
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| Analýza časových sérií obrazů živých buněk vyžaduje automatizaci. Tento příspěvek je o hlavních rysech softwarového nástroje, který byl vyvinut pro tento účel v naší laboratoři. Jsou prezentována některá vylepšení dříve publikované metody pro sledování pohybu subcelulárních struktur, která je založena na torii grafů. Chování metody je vyhodnoceno na obrázcích centromerických heterochromatinových oblastí určených HP1beta-GFP proteinem. Výsledky ukazují, že zmíněná metoda je velmi dobře aplikovatelná na tento typ dat. |
| Links | |
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| GA202/04/0907, research and development project | Name: Cytometrie s vysokým rozlišením na živých buňkách |
| Investor: Czech Science Foundation, High-resolution cytometry of living cells | |
| GP204/03/D034, research and development project | Name: Trojrozměrná analýza buněčných jader s využitím obrazové cytometrie |
| Investor: Czech Science Foundation, Threedimensional analysis of cell nuclei using image cytometry | |
| IAA5004306, research and development project | Name: Struktura lidského genomu |
| Investor: Academy of Sciences of the Czech Republic, Human genome structure | |
| IBS5004010, research and development project | Name: Vývoj nových diagnostických technik pro onkologii |
| Investor: Academy of Sciences of the Czech Republic, Development of new diagnostic teniques for oncology | |
| MSM 143300002, plan (intention) | Name: Využití počítačové analýzy obrazu v optické mikroskopii |
| Investor: Ministry of Education, Youth and Sports of the CR, Application of computer image analysis in optical microscopy | |
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