D 2004

Cytological study of DNA methylation and histone methylation patterns in human cell lines

SKALNÍKOVÁ, Magdalena, Eva BÁRTOVÁ, Stanislav KOZUBEK and Michal KOZUBEK

Basic information

Original name

Cytological study of DNA methylation and histone methylation patterns in human cell lines

Name in Czech

Cytologická studie chování DNA metylace a histonové metylace v lidských buněčných liniích

Authors

SKALNÍKOVÁ, Magdalena (203 Czech Republic), Eva BÁRTOVÁ (203 Czech Republic), Stanislav KOZUBEK (203 Czech Republic) and Michal KOZUBEK (203 Czech Republic, guarantor)

Edition

First Edition 2004. Brno, Biophysics of the Genome, p. 72-75, 4 pp. 2004

Publisher

Masaryk University

Other information

Language

English

Type of outcome

Stať ve sborníku

Field of Study

Genetics and molecular biology

Country of publisher

Czech Republic

Confidentiality degree

není předmětem státního či obchodního tajemství

RIV identification code

RIV/00216224:14330/04:00009706

Organization unit

Faculty of Informatics

ISBN

80-210-3560-9

Keywords in English

cytometry

Tags

Tags

International impact
Změněno: 29/10/2010 14:31, prof. RNDr. Michal Kozubek, Ph.D.

Abstract

V originále

Epigenetic processes are defined as heritable changes in genome function that occur without a change in DNA sequence. Gene expression, chromosome segregation, DNA replication, repair, and recombination all act, not on DNA alone, but on the chromatin template. DNA methylation, along with histone lysine methylation, establishes the framework for long-term epigenetic maintenance. The discovery that enzymes can (re)organise chromatin into accessible and inaccessible configurations revealed epigenetic mechanisms that considerably extend the information potential of the genetic code. In mammals, heterochromatin is characterised by DNA methylation at CpG dinucleotides and methylation at lysine 9 of histone 3 (H3- K9), whereas euchromatin is associated with methylation at lysine 4 of histone 3 (H3-K4). In our experiments, the detection of DNA methylated regions at chromosomal level was performed using indirect immunofluorescence technique combined with FISH. The selected metaphase chromosomes HSA 2 were determined using FISH. Sequential 5-methylcytosin rich regions were visualised using immunofluorescent labelling in retinoblastoma cell line Y79 and in leukemic cell line K562. Our model study is partly focused on the global histone H3-K4 and H3-K9 trimethylation studied by qualitative immunohistochemistry in retinoblastoma cells Y79 and leukemic cells K562. Our results highlight the importance of the relationships between histone modifications and DNA methylation, however the mutual connection between individual epigenetic hereditary mechanisms has not been made clear yet.

In Czech

Cytologická studie chování DNA metylace a histonové metylace v lidských buněčných liniích.

Links

GA202/04/0907, research and development project
Name: Cytometrie s vysokým rozlišením na živých buňkách
Investor: Czech Science Foundation, High-resolution cytometry of living cells
GP202/03/D033, research and development project
Name: Vliv metylace a acetylace na strukturu chromatinu
Investor: Czech Science Foundation, The efect of methylation and acetylation on chromatin structure
IAA5004306, research and development project
Name: Struktura lidského genomu
Investor: Academy of Sciences of the Czech Republic, Human genome structure
MSM 143300002, plan (intention)
Name: Využití počítačové analýzy obrazu v optické mikroskopii
Investor: Ministry of Education, Youth and Sports of the CR, Application of computer image analysis in optical microscopy
NC6987, research and development project
Name: Epigeneticky kontrolované změny exprese genů u nádorových onemocnění
Investor: Ministry of Health of the CR, Epigenetic control of gene expression in malignant diseases
1A8241, research and development project
Name: Nové možnosti diagnostiky leukémií s využitím technologie DNA-mikročipů
Investor: Ministry of Health of the CR, New possibilities of diagnostics of leukemia using DNA-microarrays