KOSINA, Aleš, Zdeněk KŘÍŽ and Jaroslav KOČA. CICADA: Parallelization and Related Problems. In Workshop on Modeling Interactions in Biomolecules II. Praha: Univerzita Karlova, Praha, 2005, p. 51.
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Basic information
Original name CICADA: Parallelization and Related Problems
Name in Czech CICADA: Parallelizace a přidružené problémy
Authors KOSINA, Aleš (203 Czech Republic, guarantor), Zdeněk KŘÍŽ (203 Czech Republic) and Jaroslav KOČA (203 Czech Republic).
Edition Praha, Workshop on Modeling Interactions in Biomolecules II, p. 51-51, 2005.
Publisher Univerzita Karlova, Praha
Other information
Original language English
Type of outcome Proceedings paper
Field of Study 10600 1.6 Biological sciences
Country of publisher Czech Republic
Confidentiality degree is not subject to a state or trade secret
RIV identification code RIV/00216224:14310/05:00013942
Organization unit Faculty of Science
Keywords in English Single Coordinate Driving; Parallelization; Conformational Analysis; result verification
Tags conformational analysis, Parallelization, result verification, Single Coordinate Driving
Changed by Changed by: Mgr. Zdeněk Kříž, Ph.D., učo 2703. Changed: 22/2/2006 14:12.
Abstract
CICADA programme is based on SCD (Single Coordinate Driving) approach and is used for a comformational analysis and molecular docing of small and middle sized molecules. CICADA programme was parallelized in Master-Slave approach. The programme were extensively tested for the correctness on different computer environment and is showen result independece on number of CPU and eviroment.
Abstract (in Czech)
Program CICADA je postaven na SCD (Single Coordinate Driving) přístupu a je používán pro konformační analýzu malých a středních molekula a pro molekulární docking. Program CICADA byl paralelizován pomocí Master-Slave přístupu. Program byl velmi intenzivně testován na různých výpočetních prostředích a výsledky ukazují nezávislot výpočtů na použitém prostředí a počtu procesorů.
Links
MSM 143100005, plan (intention)Name: Strukturně-funkční vztahy biomolekul a jejich role v metabolismu
Investor: Ministry of Education, Youth and Sports of the CR, Biomolecular Structure-function Relationships and their role in the Metabolism
MSM0021622413, plan (intention)Name: Proteiny v metabolismu a při interakci organismů s prostředím
Investor: Ministry of Education, Youth and Sports of the CR, Proteins in metabolism and interaction of organisms with the environment
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