BÁRTOVÁ, Eva, J. PACHERNÍK, Andrea HARNIČAROVÁ, A. KOVAŘÍK, M. KOVAŘÍKOVÁ, Jiřina HOFMANOVÁ, Magdalena SKALNÍKOVÁ, Michal KOZUBEK and Stanislav KOZUBEK. Nuclear levels and patterns of histone H3 modification and HP1 proteins after inhibition of histone deacetylases. Journal of Cell Science. Cambridge: Company of Biologists Ltd., 2005, vol. 118, No 21, p. 5035-5046. ISSN 0021-9533.
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Basic information
Original name Nuclear levels and patterns of histone H3 modification and HP1 proteins after inhibition of histone deacetylases
Name in Czech Jaderné úrovně a vzory modifikací histonů H3 a proteinů HP1 po potlačení deacetyláz histonů
Authors BÁRTOVÁ, Eva (203 Czech Republic, guarantor), J. PACHERNÍK (203 Czech Republic), Andrea HARNIČAROVÁ (703 Slovakia), A. KOVAŘÍK (203 Czech Republic), M. KOVAŘÍKOVÁ (203 Czech Republic), Jiřina HOFMANOVÁ (203 Czech Republic), Magdalena SKALNÍKOVÁ (203 Czech Republic), Michal KOZUBEK (203 Czech Republic) and Stanislav KOZUBEK (203 Czech Republic).
Edition Journal of Cell Science, Cambridge, Company of Biologists Ltd. 2005, 0021-9533.
Other information
Original language English
Type of outcome Article in a journal
Field of Study Genetics and molecular biology
Country of publisher United Kingdom of Great Britain and Northern Ireland
Confidentiality degree is not subject to a state or trade secret
Impact factor Impact factor: 6.543
RIV identification code RIV/00216224:14330/05:00012958
Organization unit Faculty of Informatics
UT WoS 000233678700014
Keywords in English histone dimethylation; histone acetylation; HP1 proteins; HDAC inhibitors; nuclear periphery
Tags HDAC inhibitors, histone acetylation, histone dimethylation, HP1 proteins, nuclear periphery
Tags International impact, Reviewed
Changed by Changed by: prof. RNDr. Michal Kozubek, Ph.D., učo 3740. Changed: 7/5/2010 15:20.
Abstract
The effects of the histone deacetylase inhibitors (HDACi) trichostatin A (TSA) and sodium butyrate (NaBt) were studied in A549, HT29 and FHC human cell lines. Global histone hyperacetylation, leading to decondensation of interphase chromatin, was characterized by an increase in H3(K9) and H3(K4) dimethylation and H3(K9) acetylation. The levels of all isoforms of heterochromatin protein, HP1, were reduced after HDAC inhibition. The observed changes in the protein levels were accompanied by changes in their interphase patterns. In control cells, H3(K9) acetylation and H3(K4) dimethylation were substantially reduced to a thin layer at the nuclear periphery, whereas TSA and NaBt caused the peripheral regions to become intensely acetylated at H3(K9) and dimethylated at H3(K4). The dispersed pattern of H3(K9) dimethylation was stable even at the nuclear periphery of HDACi-treated cells. After TSA and NaBt treatment, the HP1 proteins were repositioned more internally in the nucleus, being closely associated with interchromatin compartments, while centromeric heterochromatin was relocated closer to the nuclear periphery. These findings strongly suggest dissociation of HP1 proteins from peripherally located centromeres in a hyperacetylated and H3(K4) dimethylated environment. We conclude that inhibition of histone deacetylases caused dynamic reorganization of chromatin in parallel with changes in its epigenetic modifications.
Abstract (in Czech)
Byly studovány jaderné úrovně a vzory modifikací histonů H3 a proteinů HP1 po potlačení deacetyláz histonů.
Links
GA202/04/0907, research and development projectName: Cytometrie s vysokým rozlišením na živých buňkách
Investor: Czech Science Foundation, High-resolution cytometry of living cells
GP202/03/D033, research and development projectName: Vliv metylace a acetylace na strukturu chromatinu
Investor: Czech Science Foundation, The efect of methylation and acetylation on chromatin structure
IAA5004306, research and development projectName: Struktura lidského genomu
Investor: Academy of Sciences of the Czech Republic, Human genome structure
LC535, research and development projectName: Dynamika a organizace chromosomů během buněčného cyklu v normě a patologii
Investor: Ministry of Education, Youth and Sports of the CR, Dynamika a organizace chromosomů během buněčného cyklu v normě a patologii
1A8241, research and development projectName: Nové možnosti diagnostiky leukémií s využitím technologie DNA-mikročipů
Investor: Ministry of Health of the CR, New possibilities of diagnostics of leukemia using DNA-microarrays
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