Analysis of biomedical image data acquired using optical
microscopy

D 2005

Analysis of biomedical image data acquired using optical microscopy

KOZUBEK, Michal, Pavel MATULA, Petr MATULA a David SVOBODA

Základní údaje

Originální název

Analysis of biomedical image data acquired using optical microscopy

Název česky

Analýza biomedicínských dat získaných pomocí optické mikroskopie

Autoři

KOZUBEK, Michal (203 Česká republika, garant), Pavel MATULA (203 Česká republika), Petr MATULA (203 Česká republika) a David SVOBODA (203 Česká republika)

Vydání

Brno, Proceedings of the 1st International Summer School on Computational Biology, od s. 21-28, 8 s. 2005

Nakladatel

Masaryk University

Další údaje

Jazyk

angličtina

Typ výsledku

Stať ve sborníku

Obor

10201 Computer sciences, information science, bioinformatics

Stát vydavatele

Česká republika

Utajení

není předmětem státního či obchodního tajemství

Kód RIV

RIV/00216224:14330/05:00012970

Organizační jednotka

Fakulta informatiky

ISBN

80-210-3907-8

Klíčová slova anglicky

optical microscopy; image analysis

Štítky

Image analysis, optical microscopy

Příznaky

Mezinárodní význam, Recenzováno

Změněno: 31. 1. 2008 10:40, prof. RNDr. Michal Kozubek, Ph.D.

Anotace

ORIG CZ

V originále

Biomedical image data can be produced by different instruments. In hospitals the most frequent source of such data are computer tomography (CT) of the brain, magnetic resonance imaging (MRI), ultrasound imaging or X-ray imag-ing. For research purposes, however, the most frequent instrument is an optical microscope (typically cells or their components are stained, observed in a fluorescence microscope, their image is recorded using a CCD camera, trans-ferred to computer memory and analysed by computer). Analysis of biomedical image data is a good example of a problem that needs collaboration of experts in biology, mathematics and computer science (or experts with knowl-edge in all these disciplines). In the case of optical microscopy also expertise in physics (optics) is an advantage. An example of a laboratory that attends to the analysis of biomedical image data acquired using optical microscopy and that gathers experts in the above-mentioned disciplines is Laboratory of Optical Microscopy at Masaryk University. This paper summarizes scientific problems solved in this laboratory.

Česky

Článek se zabývá analýzou biomedicínských dat získaných pomocí optické mikroskopie.

Návaznosti

GA202/04/0907, projekt VaV

Název: Cytometrie s vysokým rozlišením na živých buňkách

Investor: Grantová agentura ČR, Cytometrie s vysokým rozlišením na živých buňkách

IAA5004306, projekt VaV

Název: Struktura lidského genomu

Investor: Akademie věd ČR, Struktura lidského genomu

MSM0021622419, záměr

Název: Vysoce paralelní a distribuované výpočetní systémy

Investor: Ministerstvo školství, mládeže a tělovýchovy ČR, Vysoce paralelní a distribuované výpočetní systémy

Citovat

KOZUBEK, Michal, Pavel MATULA, Petr MATULA a David SVOBODA. Analysis of biomedical image data acquired using optical microscopy. In DUŠEK, Ladislav, Jiří HŘEBÍČEK a Jiří JARKOVSKÝ. Proceedings of the 1st International Summer School on Computational Biology. Brno: Masaryk University, 2005, s. 21-28. ISBN 80-210-3907-8.

@inproceedings{599524,
   author = {Kozubek, Michal and Matula, Pavel and Matula, Petr and Svoboda, David},
   address = {Brno},
   booktitle = {Proceedings of the 1st International Summer School on Computational Biology},
   keywords = {optical microscopy; image analysis},
   language = {eng},
   location = {Brno},
   isbn = {80-210-3907-8},
   pages = {21-28},
   publisher = {Masaryk University},
   title = {Analysis of biomedical image data acquired using optical microscopy},
   year = {2005}
}

TY  - JOUR
ID  - 599524
AU  - Kozubek, Michal - Matula, Pavel - Matula, Petr - Svoboda, David
PY  - 2005
TI  - Analysis of biomedical image data acquired using optical microscopy
PB  - Masaryk University
CY  - Brno
SN  - 8021039078
KW  - optical microscopy
KW  - image analysis
N2  - Biomedical image data can be produced by different instruments. In hospitals the most frequent source of such data are computer tomography (CT) of the brain, magnetic resonance imaging (MRI), ultrasound imaging or X-ray imag-ing. For research purposes, however, the most frequent instrument is an optical microscope (typically cells or their components are stained, observed in a fluorescence microscope, their image is recorded using a CCD camera, trans-ferred to computer memory and analysed by computer). Analysis of biomedical image data is a good example of a problem that needs collaboration of experts in biology, mathematics and computer science (or experts with knowl-edge in all these disciplines). In the case of optical microscopy also expertise in physics (optics) is an advantage. An example of a laboratory that attends to the analysis of biomedical image data acquired using optical microscopy and that gathers experts in the above-mentioned disciplines is Laboratory of Optical Microscopy at Masaryk University. This paper summarizes scientific problems solved in this laboratory.
ER  -

KOZUBEK, Michal, Pavel MATULA, Petr MATULA a David SVOBODA. Analysis of biomedical image data acquired using optical microscopy. In DUŠEK, Ladislav, Jiří HŘEBÍČEK a Jiří JARKOVSKÝ. \textit{Proceedings of the 1st International Summer School on Computational Biology}. Brno: Masaryk University, 2005, s.~21-28. ISBN~80-210-3907-8.

Podrobný výpis o publikaci