ŠVEC, Pavel, Dana NOVÁKOVÁ, Lenka ŽÁČKOVÁ, Martina KUKLETOVÁ and Ivo SEDLÁČEK. Evaluation of (GTG)5-PCR for rapid identification of Streptococcus mutans. Antonie van Leeuwenhoek International Journal of General and Molecular Microbiology. Springer, 2008, vol. 94, No 4, p. 573-579. ISSN 0003-6072.
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Basic information
Original name Evaluation of (GTG)5-PCR for rapid identification of Streptococcus mutans
Name in Czech (GTG)5-PCR pro rychlou identifikaci druhu Streptococcus mutans
Authors ŠVEC, Pavel (203 Czech Republic, guarantor), Dana NOVÁKOVÁ (203 Czech Republic), Lenka ŽÁČKOVÁ (203 Czech Republic), Martina KUKLETOVÁ (203 Czech Republic) and Ivo SEDLÁČEK (203 Czech Republic).
Edition Antonie van Leeuwenhoek International Journal of General and Molecular Microbiology, Springer, 2008, 0003-6072.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 10600 1.6 Biological sciences
Country of publisher Netherlands
Confidentiality degree is not subject to a state or trade secret
WWW URL
Impact factor Impact factor: 1.673
RIV identification code RIV/00216224:14310/08:00026509
Organization unit Faculty of Science
UT WoS 000259670400008
Keywords in English Dental caries; (GTG)5-PCR; Identification; Automated ribotyping; Streptococcus mutans
Tags (GTG)5-PCR, automated ribotyping, dental caries, identification, Streptococcus mutans
Tags International impact, Reviewed
Changed by Changed by: doc. RNDr. Pavel Švec, Ph.D., učo 1098. Changed: 18/6/2009 12:09.
Abstract
Repetitive sequence-based polymerase chain reaction (PCR) fingerprinting using the (GTG)5 primer was applied for fast screening of bacterial strains isolated from dental plaque of early childhood caries (ECC)-affected children. A group of 29 Gram-positive bacteria was separated into a homogeneous cluster together with Streptococcus mutans reference strains and constituted an aberrant branch after the numerical analysis of (GTG)5-PCR fingerprints. Automated ribotyping with EcoRI restriction enzyme (RiboPrinter microbial characterization system) revealed high genetic heterogeneity among the tested group and proved to be a good tool for strain-typing purposes. Further characterization of the studied strains was achieved by extensive phenotyping and whole-cell protein fingerprinting and confirmed all the strains as S. mutans representatives. Obtained results showed rep-PCR fingerprinting with the (GTG)5 primer to be a fast and reliable method for identification of S. mutans.
Abstract (in Czech)
Metoda rep-PCR s primerem (GTG)5 byla použita pro analýzu bakterií izolovaných ze zubního kazu dětí. Tyto kmeny byly dále analyzovány automatickou ribotypizací (RiboPrinter) a analýzou celkových buněčných proteinů. Na základě získaných výsledků se (GTG)5-PCR ukázala jako vhodná pro identifikaci druhu Streptococcus mutans.
Links
MSM0021622416, plan (intention)Name: Diverzita biotických společenstev a populací: kauzální analýza variability v prostoru a čase
Investor: Ministry of Education, Youth and Sports of the CR, Diversity of Biotic Communities and Populations: Causal Analysis of variation in space and time
1M0528, research and development projectName: Stomatologické výzkumné centrum
Investor: Ministry of Education, Youth and Sports of the CR, Dental research centre
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