Energetics, conformation and recognition of DNA duplexes
modified by methylated analougues of [PtCl(dien)]+

J 2009

Energetics, conformation and recognition of DNA duplexes modified by methylated analougues of [PtCl(dien)]+

NOVÁKOVÁ, Olga, Jaroslav MALINA, Jana KAŠPÁRKOVÁ, Anna HALÁMIKOVÁ, Vladan BERNARD et. al.

Základní údaje

Originální název

Energetics, conformation and recognition of DNA duplexes modified by methylated analougues of [PtCl(dien)]+

Autoři

NOVÁKOVÁ, Olga, Jaroslav MALINA, Jana KAŠPÁRKOVÁ, Anna HALÁMIKOVÁ, Vladan BERNARD, Francesco INTINI, Giovanni NATILE a Viktor BRABEC

Vydání

Chemistry – A European Journal, Germany, Wiley, 2009, 0947-6539

Další údaje

Jazyk

angličtina

Typ výsledku

Článek v odborném periodiku

Obor

10610 Biophysics

Stát vydavatele

Německo

Utajení

není předmětem státního či obchodního tajemství

Impakt faktor

Impact factor: 5.382

Organizační jednotka

Přírodovědecká fakulta

UT WoS

000267501400018

Klíčová slova česky

DNA, DNA struktury, platina, polymerizace

Klíčová slova anglicky

DNA, DNA recognition, DNA structures, platinum, polymerization

Příznaky

Mezinárodní význam, Recenzováno

Změněno: 13. 1. 2011 11:39, doc. Mgr. Vladan Bernard, Ph.D.

Anotace

V originále

In early studies of empirical structure–activity relationships, monodentate PtII complexes were considered to be biologically inactive. Examples of such inactive monodentate PtII compounds are [PtCl (dien)]+ dien=diethylenetriamine) and [PtCl(NH3)3]+. DNA is considered the major biological target of platinum compounds. Thus, monodentate DNA binding of PtII compounds was previously expected to display insignificant biological effects because it was assumed to affect DNA conformation and downstream cellular processes markedly less than the cross-links of bifunctional PtII complexes. More recently it was shown that some monodentate PtII complexes do exhibit biological effects; the active monodentate PtII complexes commonly feature bulkier amine ligands than the hitherto used dien or NH3 groups. We were therefore interested in determining whether a simple but marked enhancement of the bulkiness of the dien ligand in monodentate [Pt (NO3)- (dien)]+ by multiple methylation of this ligand affects the early phases in which platinum compounds exert their biological activity. More specifically, the goals of this study, performed in cell-free media, were to determine how the modification of DNA duplexes by methylated analogues of [Pt (NO3)- (dien)]+ affects their energetics and how the alterations of this biophysical parameter are reflected by the recognition of these duplexes by DNA polymerases and the DNA repair system. We have found that the impact of the methylation of [Pt (NO3) (dien)]+ on the biophysical properties of DNA (thermodynamic, thermal, and conformational properties) and its biochemical processes (DNA polymerization and the repair of DNA adducts) is remarkable. Hence, we conclude that monodentate DNA binding of PtII compounds may considerably affect the biophysical properties of DNA and consequently downstream cellular processes as a result of a large increase in the bulkiness of the nonleaving ligands in this class of metal complex.

Citovat

NOVÁKOVÁ, Olga, Jaroslav MALINA, Jana KAŠPÁRKOVÁ, Anna HALÁMIKOVÁ, Vladan BERNARD, Francesco INTINI, Giovanni NATILE a Viktor BRABEC. Energetics, conformation and recognition of DNA duplexes modified by methylated analougues of [PtCl(dien)]+. Chemistry – A European Journal. Germany: Wiley, 2009, roč. 2009, č. 15, s. 6211-6221. ISSN 0947-6539.

@article{842978,
   author = {Nováková, Olga and Malina, Jaroslav and Kašpárková, Jana and Halámiková, Anna and Bernard, Vladan and Intini, Francesco and Natile, Giovanni and Brabec, Viktor},
   article_location = {Germany},
   article_number = {15},
   keywords = {DNA, DNA recognition, DNA structures, platinum, polymerization},
   language = {eng},
   issn = {0947-6539},
   journal = {Chemistry – A European Journal},
   title = {Energetics, conformation and recognition of DNA duplexes modified by methylated analougues of [PtCl(dien)]+},
   volume = {2009},
   year = {2009}
}

TY  - JOUR
ID  - 842978
AU  - Nováková, Olga - Malina, Jaroslav - Kašpárková, Jana - Halámiková, Anna - Bernard, Vladan - Intini, Francesco - Natile, Giovanni - Brabec, Viktor
PY  - 2009
TI  - Energetics, conformation and recognition of DNA duplexes modified by methylated analougues of [PtCl(dien)]+
JF  - Chemistry – A European Journal
VL  - 2009
IS  - 15
SP  - 6211-6221
EP  - 6211-6221
PB  - Wiley
SN  - 09476539
KW  - DNA, DNA recognition, DNA structures, platinum, polymerization
N2  - In early studies of empirical structure–activity relationships, monodentate PtII complexes were considered to be biologically inactive. Examples of such inactive monodentate PtII compounds are [PtCl (dien)]+ dien=diethylenetriamine) and [PtCl(NH3)3]+. DNA is considered the major biological target of platinum compounds. Thus, monodentate DNA binding of PtII compounds was previously expected to display insignificant biological effects because it was assumed to affect DNA conformation and downstream cellular processes markedly less than the cross-links of bifunctional PtII complexes. More recently it was shown that some monodentate PtII complexes do exhibit biological effects; the active monodentate PtII complexes commonly feature bulkier amine ligands than the hitherto used dien or NH3 groups. We were therefore interested in determining whether a simple but marked enhancement of the bulkiness of the dien ligand in monodentate [Pt (NO3)- (dien)]+ by multiple methylation of this ligand affects the early phases in which platinum compounds exert their biological activity. More specifically, the goals of this study, performed in cell-free media, were to determine how the modification of DNA duplexes by methylated analogues of [Pt (NO3)- (dien)]+ affects their energetics and how the alterations of this biophysical parameter are reflected by the recognition of these duplexes by DNA polymerases and the DNA repair system. We have found that the impact of the methylation of [Pt (NO3) (dien)]+ on the biophysical properties of DNA (thermodynamic, thermal, and conformational properties) and its biochemical processes (DNA polymerization and the repair of DNA adducts) is remarkable. Hence, we conclude that monodentate DNA binding of PtII compounds may considerably affect the biophysical properties of DNA and consequently downstream cellular processes as a result of a large increase in the bulkiness of the nonleaving ligands in this class of metal complex.
ER  -

NOVÁKOVÁ, Olga, Jaroslav MALINA, Jana KAŠPÁRKOVÁ, Anna HALÁMIKOVÁ, Vladan BERNARD, Francesco INTINI, Giovanni NATILE a Viktor BRABEC. Energetics, conformation and recognition of DNA duplexes modified by methylated analougues of [PtCl(dien)]+. \textit{Chemistry – A European Journal}. Germany: Wiley, 2009, roč.~2009, č.~15, s.~6211-6221. ISSN~0947-6539.

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