Výpis publikací

KRÁTKÁ, Marie, Yennifer MATA-SUCRE, Pavel JEDLIČKA, Eduard KEJNOVSKÝ a André MARQUES. Insights into the Evolution of Centromere from Holocentric Luzula sylvatica (Juncaceae). In Student Conference of Plant Biology 2024 Vienna. 2024.

KRÁTKÁ, Marie, Pavel JEDLIČKA, Zdeněk KUBÁT a Eduard KEJNOVSKÝ. Evolutionary Dynamics of LTR Retrotransposons in Holocentric Plants from Juncaceae Family. In ITAT 2023 Information Technologies – Applications and Theory. 2023. ISSN 1613-0073.

JEDLIČKA, Pavel, Ivan VANÁT, Matej LEXA, Marie KRÁTKÁ a Eduard KEJNOVSKÝ. TE-greedy-nester: a tool for reconstruction of transposable elements in plant genomes. Online. In Workshop on Bioinformatics and Computational Biology (WBCB 2023). 2023, s. 12-12.

LEXA, Matej, Monika ČECHOVÁ, Son Hoang NGUYEN, Pavel JEDLIČKA, Viktor TOKAN, Zdeněk KUBÁT, Roman HOBZA a Eduard KEJNOVSKÝ. HiC-TE: a computational pipeline for Hi-C data analysis to study the role of repeat family interactions in the genome 3D organization. BIOINFORMATICS. ENGLAND: OXFORD UNIV PRESS, 2022, roč. 38, č. 16, s. 4030-4032. ISSN 1367-4803. Dostupné z: https://dx.doi.org/10.1093/bioinformatics/btac442.

KRÁTKÁ, Marie, Pavel JEDLIČKA, Zdeněk KUBÁT, Viktor TOKAN, Jakub ŠMERDA, Petr BUREŠ a Eduard KEJNOVSKÝ. LTR retrotransposons in holocentric plants from the Cyperaceae and Juncaceae families. In ELIXIR CZ Annual conference 2022: Plant Cytogenomics. 2022.

LEXA, Matej, Pavel JEDLICKA, Ivan VANÁT, Michal ČERVEŇANSKÝ a Eduard KEJNOVSKÝ. TE-greedy-nester: structure-based detection of LTR retrotransposons and their nesting. Bioinformatics. OXFORD: OXFORD UNIV PRESS, 2020, roč. 36, č. 20, s. 4991-4999. ISSN 1367-4803. Dostupné z: https://dx.doi.org/10.1093/bioinformatics/btaa632.

JEDLICKA, Pavel, Matej LEXA a Eduard KEJNOVSKÝ. What Can Long Terminal Repeats Tell Us About the Age of LTR Retrotransposons, Gene Conversion and Ectopic Recombination? Frontiers in Plant Science. Lausanne (Switzerland): Frontiers Media SA, 2020, roč. 11, č. 644, s. 1-15. ISSN 1664-462X. Dostupné z: https://dx.doi.org/10.3389/fpls.2020.00644.

JEDLIČKA, Pavel, Matej LEXA, Ivan VANÁT, Eduard KEJNOVSKÝ a Roman HOBZA. Nested plant LTR retrotransposons target specific regions of other elements, while all LTR retrotransposons often target palindromes and nucleosome-occupied regions: in silico study. Mobile DNA. 2019, roč. 10, č. 1, s. 1-14. ISSN 1759-8753. Dostupné z: https://dx.doi.org/10.1186/s13100-019-0186-z.

TOKAN, Viktor, Janka PUTEROVÁ, Matej LEXA a Eduard KEJNOVSKÝ. Quadruplex DNA in long terminal repeats in maize LTR retrotransposons inhibits the expression of a reporter gene in yeast. BMC Genomics. BioMed Central, 2018, roč. 19, 06 03 2018, s. 184-194. ISSN 1471-2164. Dostupné z: https://dx.doi.org/10.1186/s12864-018-4563-7.

LEXA, Matej, Radovan LAPÁR, Pavel JEDLIČKA, Ivan VANÁT, Michal ČERVEŇANSKÝ a Eduard KEJNOVSKÝ. TE-nester: a recursive software tool for structure-based discovery of nested transposable elements. Online. In Zheng Huiru. Proceedings 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM). Neuveden: IEEE, 2018, s. 2776-2778. ISBN 978-1-5386-5488-0. Dostupné z: https://dx.doi.org/10.1109/BIBM.2018.8621071.

MICHALOVOVÁ, Monika, Z KUBAT, Roman HOBZA, Boris VYSKOT a Eduard KEJNOVSKÝ. Fully automated pipeline for detection of sex linked genes using RNA-Seq data. BMC Bioinformatics. London: BioMed Central, 2015, roč. 16, 8 s. ISSN 1471-2105. Dostupné z: https://dx.doi.org/10.1186/s12859-015-0509-0.

KEJNOVSKÝ, Eduard, Viktor TOKAN a Matej LEXA. Transposable elements and G-quadruplexes. Chromosome Research. Springer Netherlands, 2015, roč. 23, č. 3, s. 615-623. ISSN 0967-3849. Dostupné z: https://dx.doi.org/10.1007/s10577-015-9491-7.

POTRONIERI, J., V. MARQUIONI, L.A.C. BERTOLLO, Eduard KEJNOVSKÝ, W.F. MOLINA, T. LIEHR a M.B. CIOFFI. Comparative Chromosomal Mapping of Microsatellites in Leporinus Species (Characiformes, Anostomidae): Unequal Accumulation on the W Chromosomes. Cytogenetic and Genome Research. Basel: Karger, 2014, roč. 142, č. 1, s. 40-45. ISSN 1424-8581. Dostupné z: https://dx.doi.org/10.1159/000355908.

LEXA, Matej, Pavlina STEFLOVA, Tomáš MARTÍNEK, Michaela VORLÍČKOVÁ, Boris VYSKOT a Eduard KEJNOVSKÝ. Guanine quadruplexes are formed by specific regions of human transposable elements. BMC Genomics. London: BioMed Central Ltd, 2014, roč. 15, č. 1, s. 1032-1043. ISSN 1471-2164. Dostupné z: https://dx.doi.org/10.1186/1471-2164-15-1032.

KRÁLOVÁ, Tereza, Radim CEGAN, Zdeněk KUBÁT, Jan VRÁNA, Boris VYSKOT, Ivan VOGEL, Eduard KEJNOVSKÝ a Roman HOBZA. Identification of a Novel Retrotransposon with Sex Chromosome-Specific Distribution in Silene latifolia. Cytogenetic and Genome research. Basel: Karger, 2014, roč. 143, 1-3, s. 87-95. ISSN 1424-8581. Dostupné z: https://dx.doi.org/10.1159/000362142.

KRÁLOVÁ, Tereza, Radim ČEGAN, Zdeněk KUBÁT, Jan VRÁNA, Ivan VOGEL, Eduard KEJNOVSKÝ a Roman HOBZA. Identification of a Novel Retrotransposon with Sex Chromosome-Specific Distribution in Silene latifolia. Cytogenetic and Genome Research. KARGER, 2014, roč. 143, 1-3, s. 87-95. ISSN 1424-8581. Dostupné z: https://dx.doi.org/10.1159/000362142.

KUBÁT, Zdeněk, Jitka ŽLUVOVÁ, Ivan VOGEL, Viera KOVÁČOVÁ, Tomáš ČERMÁK, Radim CEGAN, Roman HOBZA, Boris VYSKOT a Eduard KEJNOVSKÝ. Possible mechanisms responsible for absence of a retrotransposon family on a plant Y chromosome. New Phytologist. HOBOKEN: WILEY-BLACKWELL, 2014, roč. 202, č. 2, s. 662-678. ISSN 0028-646X. Dostupné z: https://dx.doi.org/10.1111/nph.12669.

KEJNOVSKÝ, Eduard a Matej LEXA. Quadruplex-forming DNA sequences spread by retrotransposons may serve as genome regulators. Mobile Genetic Elements. Landes Bioscience, 2014, roč. 4, č. 1, s. "e28084", 4 s. ISSN 2159-256X. Dostupné z: https://dx.doi.org/10.4161/mge.28084.

LEXA, Matej, Eduard KEJNOVSKÝ, Pavlína ŠTEFLOVÁ, Helena KONVALINOVÁ, Michaela VORLÍČKOVÁ a Boris VYSKOT. Quadruplex-forming sequences occupy discrete regions inside plant LTR retrotransposons. Nucleic Acids Research. Oxford: Oxford University Press, 2014, roč. 42, č. 2, s. 968-978. ISSN 0305-1048. Dostupné z: https://dx.doi.org/10.1093/nar/gkt893.

ŠTEFLOVÁ, Pavlína, Roman HOBZA, Boris VYSKOT a Eduard KEJNOVSKÝ. Strong Accumulation of Chloroplast DNA in the Y Chromosomes of Rumex acetosa and Silene latifolia. Cytogenetic and Genome Research. Basel: Karger, 2014, roč. 142, č. 1, s. 59-65. ISSN 1424-8581. Dostupné z: https://dx.doi.org/10.1159/000355212.

MICHALOVOVÁ, Monika, Boris VYSKOT a Eduard KEJNOVSKÝ. Analysis of plastid and mitochondrial DNA insertions in the nucleus (NUPTs and NUMTs) of six plant species: size, relative age and chromosomal localization. Heredity. LONDON: NATURE PUBLISHING GROUP, 2013, roč. 111, č. 4, s. 314-320. ISSN 0018-067X. Dostupné z: https://dx.doi.org/10.1038/hdy.2013.51.

KEJNOVSKÝ, Eduard. Co Gregor Mendel nevěděl? In Vesmír. Praha: Vesmír, s.r.o., 2013, s. 402-403. ISSN 0042-4544.

ŠTEFLOVÁ, Pavlína, Viktor TOKAN, Ivan VOGEL, Matej LEXA, Jiří MACAS, Petr NOVAK, Roman HOBZA, Boris VYSKOT a Eduard KEJNOVSKÝ. Contrasting Patterns of Transposable Element and Satellite Distribution on Sex Chromosomes (XY1Y2) in the Dioecious Plant Rumex acetosa. GENOME BIOLOGY AND EVOLUTION. Oxford, UK: Oxford Univ Press, 2013, roč. 5, č. 4, s. 769-782. ISSN 1759-6653. Dostupné z: https://dx.doi.org/10.1093/gbe/evt049.

KEJNOVSKÝ, Eduard, Monika MICHALOVOVÁ, Pavlína ŠTEFLOVÁ, Iva KEJNOVSKÁ, Susana MANZANO, Roman HOBZA, Zdeněk KUBÁT, Jan KOVAŘÍK, Manuel JAMILENA a Boris VYSKOT. Expansion of Microsatellites on Evolutionary Young Y Chromosome. PLoS One. San Francisco, CA, USA: Public Library of Science, 2013, roč. 8, č. 1, s. "nestránkováno", 10 s. ISSN 1932-6203. Dostupné z: https://dx.doi.org/10.1371/journal.pone.0045519.

KEJNOVSKÝ, Eduard. Horská rozjímání - Eseje o hledání smyslu života. 1. vyd. Brno: Cesta, 2013, 132 s. ISBN 978-80-7295-149-9.

KEJNOVSKÝ, Eduard. O čase. O fragmentaci času a pomíjivosti všeho. In Vesmír. Praha: Vesmír, s.r.o., 2013, s. 298-299. ISSN 0042-4544.

KEJNOVSKÝ, Eduard. Odkud pochází „cizí DNA “? In Vesmír. Praha: Vesmír, s.r.o., 2013, s. 261-262. ISSN 0042-4544.

KEJNOVSKÝ, Eduard. Skákající geny v mozku a v rakovinných buňkách. In Vesmír. Praha: Vesmír, s.r.o., 2013, s. 197-198. ISSN 0042-4544.

KEJNOVSKÝ, Eduard. Genom kukuřice vydává svá tajemství. In Vesmír. Praha: Vesmír, s.r.o., 2012, s. 623. ISSN 0042-4544.

CEGAN, R, Boris VYSKOT, Eduard KEJNOVSKÝ, Zdeněk KUBÁT, Hana BLAVET, Jan SAFAR, Jaroslav DOLEŽEL, N BLAVET a Roman HOBZA. Genomic diversity in two related plant species with and without sex chromosomes – Silene latifolia and S. vulgaris. PLoS Biology. USA: PUBLIC LIBRARY SCIENCE, 2012, roč. 7, č. 2, s. 1-9. ISSN 1544-9173. Dostupné z: https://dx.doi.org/10.1371/journal.pone.0031898.

CIOFFI, Marcelo de Bello, Eduard KEJNOVSKÝ, Vinicius MARQUIONI, Juliana POLTRONIERI, Wagner Franco MOLINA, Debora DINIZ a Luiz Antonio Carlos BERTOLLO. The key role of repeated DNAs in sex chromosome evolution in two fish species with ZW sex chromosome system. MOLECULAR CYTOGENETICS. LONDON: BIOMED CENTRAL LTD, 2012, roč. 5, Jun, s. "nestránkováno", 7 s. ISSN 1755-8166. Dostupné z: https://dx.doi.org/10.1186/1755-8166-5-28.

POKORNA, Martina, Lukas KRATOCHVIL a Eduard KEJNOVSKÝ. Microsatellite distribution on sex chromosomes at different stages of heteromorphism and heterochromatinization in two lizard species (Squamata: Eublepharidae: Coleonyx elegans and Lacertidae: Eremias velox). BMC Genetics. 2011, in press.

MACAS, Jiri, Eduard KEJNOVSKÝ, Pavel NEUMANN, Petr NOVAK, Andrea KOBLIZKOVA a Boris VYSKOT. Next Generation Sequencing-based Analysis of Repetitive DNA in the Model Dioceous Plant Silene latifolia. PLoS ONE. 2011, in press.

NEUMANN, P, A NAVRATILOVA, A KOBLIZKOVA, Eduard KEJNOVSKÝ, E HRIBOVA, Roman HOBZA, A WIDMER, Jaroslav DOLEŽEL a Jiri MACAS. Plant centromeric retrotransposons: a structural and cytogenetic perspective. Mobile DNA. 2011, roč. 2, s. 4.

CIOFFI, MB, Eduard KEJNOVSKÝ a LAC BERTOLLO. The chromosomal distribution of microsatellite repeats in the genome of the wolf fish Hoplias malabaricus, focusing on the sex chromosomes. Cytogenetics and Genome Research. 2011, roč. 132, s. 289-296.

KEJNOVSKÝ, Eduard a Boris VYSKOT. Silene latifolia: The classical model to study heteromorphic sex chromosomes. Cytogenetic and Genome research. Basel: Karger, 2010, roč. 129, 1-3. ISSN 1424-8581.

MARIOTTI, B, S MANZANO, Eduard KEJNOVSKÝ, Boris VYSKOT a M JAMILENA. Accumulation of Y-specific satellite DNAs during the evolution of Rumex acetosa sex chromosomes. Molecular Genetics and Genomics. 2009, roč. 281, s. 249-259. ISSN 1617-4615.

KEJNOVSKÝ, Eduard, Ilia LEITCH a Andrew LEITCH. Contrasting evolutionary dynamics between angiosperm and mammalian genomes. Trends in Ecology and Evolution. 2009, roč. 24, s. 572-582. ISSN 0169-5347.

KEJNOVSKÝ, Eduard, Roman HOBZA, Zdeněk KUBÁT, Tomáš ČERMÁK a Boris VYSKOT. The role of repetitive DNA in structure and evolution of sex chromosomes in plants. Heredity. 2009, roč. 102, s. 533-541.

MARAIS, Gabriel, Michael NICOLAS, Roberta BERGERO, Pierre CHAMBRIER, Eduard KEJNOVSKÝ, Francoise MONEGER, Roman HOBZA, Alex WIDMER a Deborah CHARLESWORTH. Evidence for degeneration of the Y chromosome in the dioecious plant Silene latifolia. Current Biology. Elsevier, 2008, roč. 18, s. 1-5. ISSN 0960-9822.

KUBÁT, Zdeněk, Roman HOBZA, Boris VYSKOT a Eduard KEJNOVSKÝ. Microsatellite accumulation on the Y chromosome in Silene latifolia. Genome. NRC Research Press, 2008, roč. 51, s. 1-7. ISSN 1480-3321.

ČERMÁK, Tomáš, Zdeněk KUBÁT, Roman HOBZA, Andrea KOBLIZKOVA, Alex WIDMER, Jiri MACAS, Boris VYSKOT a Eduard KEJNOVSKÝ. Survey of repetitive sequences in Silene latifolia with respect to their distribution on sex chromosomes. Chromosome Research. 2008, roč. 16/2008, s. 961-976.

KEJNOVSKÝ, Eduard, Roman HOBZA, Zdeněk KUBÁT, Alex WIDMER, Gabriel MARAIS a Boris VYSKOT. High intrachromosomal similarity of retrotransposon long terminal repeats: Evidence for homogenization by gene conversion on plant sex chromosomes? Gene. Elsevier, 2007, roč. 390, s. 92-97. ISSN 0378-1119.

HOBZA, Roman, Eduard KEJNOVSKY, Boris VYSKOT a Alex WIDMER. The role of chromosomal rearrangements in the evolution of Silene latifolia sex chromosomes. Molecular Genetics and Genomics. Springer, 2007, roč. 278, s. 633-638. ISSN 1617-4615.

KEJNOVSKÝ, Eduard, Zdeněk KUBÁT, Roman HOBZA, Martina LENGEROVÁ, S SATO, S TABATA, K FUKUI, S MATSUNAGA a Boris VYSKOT. Accumulation of chloroplast DNA sequences on the Y chromosome of Silene latifolia. Genetica. Springer, 2006, roč. 128, s. 167-175. ISSN 0016-6707.

HOBZA, Roman, Martina LENGEROVA, Julie SVOBODA, Hana KUBEKOVÁ, Eduard KEJNOVSKÝ a Boris VYSKOT. An accumulation of a tandem DNA repeats on the Y chromosome in an early stages of sex chromosome evolution. Chromosoma. Springer, 2006, roč. 115, s. 376-382. ISSN 0009-5915.

HOBZA, Roman, Martina LENGEROVÁ, J SVOBODA, Hana KUBEKOVÁ, Eduard KEJNOVSKÝ a Boris VYSKOT. An accumulation of tandem DNA repeats on the Y chromosome in Silene latifolia during early stages of sex chromosome evolution. Chromosoma. Springer, 2006, roč. 115, č. 5, s. 376-382. ISSN 0009-5915.

KEJNOVSKÝ, Eduard a Roman HOBZA. Evoluční genomika. Elportál. Brno: Masarykova univerzita, 2006. ISSN 1802-128X.

KEJNOVSKÝ, Eduard, Zdeněk KUBÁT, Jiri MACAS, Roman HOBZA, Jaroslav MRACEK a Boris VYSKOT. Retand: A novel family of gypsy-like retrotransposon harboring an amplified tandem repeat. Molecular Genetics and Genomics. Springer, 2006, roč. 276, s. 254-263. ISSN 1617-4615.

MATSUNAGA, Sachihiro, Sabine LEBEL-HARDENACK, Eduard KEJNOVSKÝ, Boris VYSKOT, Sarah GRANT a Satoshi KAWANO. An anther- and petal-specific gene SlMF1 is a. Genes and Genetics Systems. Genetics Society of Japan, 2005, roč. 80, s. 395-401. ISSN 1341-7568.

KEJNOVSKÝ, Eduard, Karel NEJEDLY a Jaroslav KYPR. Factors influencing resistance of UV-irradiated DNA to the restriction endonuclease cleavage. International Journal of Biological Macromolecules. Elsevier, 2004, roč. 34, s. 213-222. ISSN 0141-8130.

MATSUNAGA, S, W UCHIDA, Eduard KEJNOVSKÝ, E ISONO, F MONEGER, I NEGRUTIU, B VYSKOT a S KAWANO. Characterization of two SEPALLATA MADS-box genes from the dioecious plant Silene latifolia. Sexual Plant Reproduction. Springer, 2004, roč. 17, s. 189-193. ISSN 0934-0882.

LENGEROVA, Martina, Eduard KEJNOVSKÝ, Roman HOBZA, Jiri MACAS, Sarah GRANT a Boris VYSKOT. Multicolor FISH mapping of the dioecious model plant, Silene latifolia. Theoretical and Applied Genetics. Springer, 2004, roč. 108, s. 1193-1199. ISSN 0040-5752.

LENGEROVÁ, Martina, Eduard KEJNOVSKÝ, Roman HOBZA, Jiří MACAS, SR GRANT a Boris VYSKOT. Multicolor FISH mapping of the dioecious model plant, Silene latifolia. Theoretical and Applied Genetics. Springer, 2004, roč. 108, č. 7, s. 1193-1199. ISSN 0040-5752.

MATSUNAGA, S, E ISONO, Eduard KEJNOVSKÝ, Boris VYSKOT, Jaroslav DOLEŽEL, S KAWANO a D CHARLESWORTH. Duplicative transfer of a MADS box gene to a plant Y chromosome. Molecular Biology and Evolution. 2003, roč. 20, s. 1062-1069. ISSN 0737-4038.

JANOUŠEK, Bohuslav, Sachihiro MATSUNAGA, Eduard KEJNOVSKÝ, Jitka ŽLŮVOVÁ a Boris VYSKOT. DNA methylation analysis of a male reproductive organ specific gene (MROS1) during pollen development. Genome. Canada: NRC Canada, 2002, roč. 45, č. 5, s. 930-938. ISSN 0831-2796.

SIROKY, Jiri, Martin LYSÁK, Jaroslav DOLEŽEL, Eduard KEJNOVSKÝ a Boris VYSKOT. Heterogeneity of rDNA distribution and genome size in Silene spp. Chromosome Research. Springer, 2001, roč. 9, s. 387-393. ISSN 0967-3849.

KEJNOVSKÝ, Eduard, J VRANA, Sachihiro MATSUNAGA, Přemysl SOUČEK, Jiri SIROKY, Jaroslav DOLEŽEL a Boris VYSKOT. Localization of male-specifically expressed MROS genes of Silene latifolia by PCR on flow-sorted sex chromosomes and autosomes. Genetics. Genetic Society of America, 2001, roč. 158, s. 1269-1277. ISSN 0016-6731.

KEJNOVSKÝ, Eduard. Construction of plant BAC libraries. Biologické listy-Biological Papers. 2000, roč. 65, s. 181-184. ISSN 0366-0486.

KEJNOVSKÝ, Eduard. Retroelements. Biologické listy-Biological Papers. 2000, roč. 65, s. 113-137. ISSN 0366-0486.

KEJNOVSKÝ, Eduard a Jaroslav KYPR. Millimolar concentrations of zinc and other metal cations cause sedimentation of DNA. Nucleic Acids Research. Oxfor University Press, 1998, roč. 26, s. 5295-5299. ISSN 0305-1048.

KEJNOVSKÝ, Eduard a Jaroslav KYPR. DNA extraction by zinc. Nucleic Acids Research. Oxford University Press, 1997, roč. 25, s. 1870-1871. ISSN 0305-1048.

KOVANDA, Jiri, Eduard KEJNOVSKÝ, Lubos ARNOLD a Jaroslav KYPR. UV light-induced crosslinking of short DNA duplex strands: Nucleotide sequence preferences and a prominent role of the duplex ends. Journal of Biomolecular Structure and Dynamics. Adenine Press, 1996, roč. 14, s. 57-65. ISSN 0739-1102.

KEJNOVSKÝ, Eduard a Jaroslav KYPR. Tris buffer protects DNA backbone aganist breakage upon irradiation with ultraviolet-light. General Physiology and Biophysics. 1993, roč. 12, s. 312-374. ISSN 0231-5882.