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@inproceedings{1122641,
author = {Byška, Jan and Jurčík, Adam and Sochor, Jiří},
address = {Germany},
booktitle = {TPCG 2013},
editor = {Silvester Czanner and Wen Tang},
keywords = {voxels;protein; tunnel; computational geometry; visualization},
howpublished = {tištěná verze "print"},
language = {eng},
location = {Germany},
isbn = {978-3-905673-98-2},
pages = {17-24},
publisher = {Eurographics Association},
title = {Geometry-based Algorithm for Detection of Asymmetric Tunnels in Protein Molecules},
year = {2013}
}
TY - JOUR
ID - 1122641
AU - Byška, Jan - Jurčík, Adam - Sochor, Jiří
PY - 2013
TI - Geometry-based Algorithm for Detection of Asymmetric Tunnels in Protein Molecules
PB - Eurographics Association
CY - Germany
SN - 9783905673982
KW - voxels;protein
KW - tunnel
KW - computational geometry
KW - visualization
N2 - We present a novel geometry-based method for computing asymmetric tunnels and voids in proteins, approximating their real shape with selected precision. Our method combines ideas from Voronoi and grid based approaches for protein analysis. We represent tunnels in protein using voxel data grid which allows us to store their shape more accurately. Our algorithm employs a tunnel skeleton computed using Voronoi diagram. The skeleton allows us to perform grid computation in a bounded space, with lower time and memory demands, and easily identify and measure individual tunnels.
ER -
BYŠKA, Jan, Adam JURČÍK a Jiří SOCHOR. Geometry-based Algorithm for Detection of Asymmetric Tunnels in Protein Molecules. In Silvester Czanner and Wen Tang. \textit{TPCG 2013}. Germany: Eurographics Association, 2013, s.~17-24. ISBN~978-3-905673-98-2.
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