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@inproceedings{1126948, author = {Strnad, Ondřej and Kozlíková, Barbora and Sochor, Jiří}, address = {Switzerland}, booktitle = {Advances in Intelligent Systems and Computing}, doi = {http://dx.doi.org/10.1007/978-3-319-07581-5_9}, editor = {Julio Saez-Rodriguez}, keywords = {protein structure; tunnel; intramolecular tunnel; active site}, howpublished = {tištěná verze "print"}, language = {eng}, location = {Switzerland}, isbn = {978-3-319-07580-8}, pages = {73-80}, publisher = {Springer International Publishing}, title = {Detection of Intramolecular Tunnels Connecting Sequence of Sites in Protein Structures}, year = {2014} }
TY - JOUR ID - 1126948 AU - Strnad, Ondřej - Kozlíková, Barbora - Sochor, Jiří PY - 2014 TI - Detection of Intramolecular Tunnels Connecting Sequence of Sites in Protein Structures PB - Springer International Publishing CY - Switzerland SN - 9783319075808 KW - protein structure KW - tunnel KW - intramolecular tunnel KW - active site N2 - Proteins are essential for functioning of all living organisms and studying their inner structure and functions has been of a high importance. Many studies concentrated on detection of various inner structures inside macromolecules (e.g. tunnels, channels, pores) which play an essential role in the functioning of a large number of proteins. Here we present a novel approach to a detection of intramolecular tunnels. These pathways may facilitate the transport of reaction intermediates among buried active sites. The results obtained by the proposed algorithm were compared to intramolecular tunnels whose presence in given structures is already known. The algorithm is able to also identify other inner structures, such as channels or pores. ER -
STRNAD, Ondřej, Barbora KOZLÍKOVÁ a Jiří SOCHOR. Detection of Intramolecular Tunnels Connecting Sequence of Sites in Protein Structures. In Julio Saez-Rodriguez. \textit{Advances in Intelligent Systems and Computing}. Switzerland: Springer International Publishing, 2014, s.~73-80. ISBN~978-3-319-07580-8. Dostupné z: https://dx.doi.org/10.1007/978-3-319-07581-5\_{}9.
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