D 2013

Model Checking of Biological Systems

BRIM, Luboš, Milan ČEŠKA and David ŠAFRÁNEK

Basic information

Original name

Model Checking of Biological Systems

Name in Czech

Ověřování modelů biologických systémů

Authors

BRIM, Luboš (203 Czech Republic, guarantor, belonging to the institution), Milan ČEŠKA (203 Czech Republic, belonging to the institution) and David ŠAFRÁNEK (203 Czech Republic, belonging to the institution)

Edition

Neuveden, Formal Methods for Dynamical Systems, p. 63-112, 50 pp. 2013

Publisher

Springer

Other information

Language

English

Type of outcome

Stať ve sborníku

Field of Study

10201 Computer sciences, information science, bioinformatics

Country of publisher

Germany

Confidentiality degree

není předmětem státního či obchodního tajemství

Publication form

printed version "print"

Impact factor

Impact factor: 0.402 in 2005

RIV identification code

RIV/00216224:14330/13:00066544

Organization unit

Faculty of Informatics

ISBN

978-3-642-38873-6

ISSN

Keywords (in Czech)

dynamické systémy

Keywords in English

dynamical systems

Tags

International impact, Reviewed
Změněno: 24/4/2014 18:49, RNDr. Pavel Šmerk, Ph.D.

Abstract

V originále

Model checking together with other formal methods and techniques is being adapted for applications to biological systems. We present a selection of approaches used for modeling biological systems and formalizing their interesting properties in temporal logics. We also give a brief account of high performance model checking techniques and add a few case studies that demonstrate the use of model checking in computational systems biology. The primary aim is to give a reference for further reading.

Links

EE2.3.20.0256, research and development project
Name: Vytvoření výzkumného týmu a mezinárodního konzorcia pro počítačový model buňky sinice
EE2.3.30.0009, research and development project
Name: Zaměstnáním čerstvých absolventů doktorského studia k vědecké excelenci
GAP202/11/0312, research and development project
Name: Vývoj a verifikace softwarových komponent v zapouzdřených systémech (Acronym: Components in Embedded Systems)
Investor: Czech Science Foundation