Modelling fine-resolution plant species richness patterns of
grasslands and forests in the Czech Republic

k 2015

Modelling fine-resolution plant species richness patterns of grasslands and forests in the Czech Republic

DIVÍŠEK, Jan a Milan CHYTRÝ

Základní údaje

Originální název

Modelling fine-resolution plant species richness patterns of grasslands and forests in the Czech Republic

Autoři

DIVÍŠEK, Jan a Milan CHYTRÝ

Vydání

58th Annual Symposium of the International Association for Vegetation Science: Understanding broad-scale vegetation patterns, 2015

Další údaje

Jazyk

angličtina

Typ výsledku

Prezentace na konferencích

Obor

10600 1.6 Biological sciences

Stát vydavatele

Česká republika

Utajení

není předmětem státního či obchodního tajemství

Odkazy

Book of Abstracts

Označené pro přenos do RIV

Organizační jednotka

Přírodovědecká fakulta

ISBN

978-80-210-7860-4

Klíčová slova anglicky

Phytosociological releve;Random Forest;spatial modelling;species diversity;vegetation database

Změněno: 6. 1. 2016 13:16, prof. RNDr. Milan Chytrý, Ph.D.

Anotace

V originále

Species richness patterns have always fascinated ecologists and numerous studies attempted to map, explain and predict species richness across large areas. Such studies usually used inventory or atlas based data with coarse spatial resolution, because fine resolution data were not available. Within large areas, our knowledge of species richness patterns is thus significantly limited to coarse resolution patterns. However, recent development of large databases of vegetation plots provides an opportunity to explore distribution of species richness at very fine resolutions. Here we aim to create maps predicting fine scale species richness of vascular plants in grassland and forest vegetation across the Czech Republic and to examine factors underlying the observed species richness patterns. We used data from the Czech National Phytosociological Database where, 27 002 georeferenced plots of grasslands and 19 764 plots of forests were available. However, data processing showed that only 15 50% of relevés, depending on selection criteria applied, were suitable for modelling. To build predictive models we used Random Forest method which is considered as a very powerful tool for prediction purposes. The modelling of species richness was based on three groups of environmental variables, namely topography & geology, climate and surrounding landscape context. Resulting models explained up to 50% of variability in species richness and residuals showed neither any obvious patterns nor significant positive spatial autocorrelation. When we used our best models to predict species richness of grasslands and forests in 37 760 grid cells, each of them spanning 1.25’ of longitude and 0.75’ of latitude (ca. 1.39 × 1.5 km = 2.09 km2), resulting maps showed meaningful patterns expected based on expert knowledge.

Návaznosti

GB14-36079G, projekt VaV

Název: Centrum analýzy a syntézy rostlinné diverzity (PLADIAS) (Akronym: PLADIAS)

Investor: Grantová agentura ČR, Centrum analýzy a syntézy rostlinné diverzity

MUNI/A/1370/2014, interní kód MU

Název: Globální environmentální změny v krajinné sféře Země v čase a prostoru (Akronym: GlobST)

Investor: Masarykova univerzita, Globální environmentální změny v krajinné sféře Země v čase a prostoru, DO R. 2020_Kategorie A - Specifický výzkum - Studentské výzkumné projekty

Citovat

DIVÍŠEK, Jan a Milan CHYTRÝ. Modelling fine-resolution plant species richness patterns of grasslands and forests in the Czech Republic. In 58th Annual Symposium of the International Association for Vegetation Science: Understanding broad-scale vegetation patterns. 2015. ISBN 978-80-210-7860-4.

@proceedings{1306892,
   author = {Divíšek, Jan and Chytrý, Milan},
   booktitle = {58th Annual Symposium of the International Association for Vegetation Science: Understanding broad-scale vegetation patterns},
   keywords = {Phytosociological releve;Random Forest;spatial modelling;species diversity;vegetation database},
   language = {eng},
   isbn = {978-80-210-7860-4},
   title = {Modelling fine-resolution plant species richness patterns of grasslands and forests in the Czech Republic},
   url = {http://www.iavs2015.cz/files/IAVS-Brno-2015-Abstracts.pdf},
   year = {2015}
}

TY  - CONF
ID  - 1306892
AU  - Divíšek, Jan - Chytrý, Milan
PY  - 2015
TI  - Modelling fine-resolution plant species richness patterns of grasslands and forests in the Czech Republic
SN  - 9788021078604
KW  - Phytosociological releve;Random Forest;spatial modelling;species diversity;vegetation database
UR  - http://www.iavs2015.cz/files/IAVS-Brno-2015-Abstracts.pdf
L2  - http://www.iavs2015.cz/files/IAVS-Brno-2015-Abstracts.pdf
N2  - Species richness patterns have always fascinated ecologists and numerous studies attempted to map, explain and predict species richness across large areas. Such studies usually used inventory or atlas based data with coarse spatial resolution, because fine resolution data were not available. Within large areas, our knowledge of species richness patterns is thus significantly limited to coarse resolution patterns. However, recent development of large databases of vegetation plots provides an opportunity to explore distribution of species richness at very fine resolutions. Here we aim to create maps predicting fine scale species richness of vascular plants in grassland and forest vegetation across the Czech Republic and to examine factors underlying the observed species richness patterns. We used data from the Czech National Phytosociological Database where, 27 002 georeferenced plots of grasslands and 19 764 plots of forests were available. However, data processing showed that only 15 50% of relevés, depending on selection criteria applied, were suitable for modelling. To build predictive models we used Random Forest method which is considered as a very powerful tool for prediction purposes. The modelling of species richness was based on three groups of environmental variables, namely topography & geology, climate and surrounding landscape context. Resulting models explained up to 50% of variability in species richness and residuals showed neither any obvious patterns nor significant positive spatial autocorrelation. When we used our best models to predict species richness of grasslands and forests in 37 760 grid cells, each of them spanning 1.25’ of longitude and 0.75’ of latitude (ca. 1.39 × 1.5 km = 2.09 km2), resulting maps showed meaningful patterns expected based on expert knowledge.
ER  -

DIVÍŠEK, Jan a Milan CHYTRÝ. Modelling fine-resolution plant species richness patterns of grasslands and forests in the Czech Republic. In \textit{58th Annual Symposium of the International Association for Vegetation Science: Understanding broad-scale vegetation patterns}. 2015. ISBN~978-80-210-7860-4.

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