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@article{1333931,
author = {Janečka, Jan and Lysák, Martin},
article_location = {Dordrecht},
article_number = {2},
doi = {http://dx.doi.org/10.1007/s10577-015-9513-5},
keywords = {Visualization; Chromosome; Karyotype; R},
language = {eng},
issn = {0967-3849},
journal = {Chromosome Research},
title = {chromDraw: an R package for visualization of linear and circular karyotypes},
url = {http://link.springer.com/article/10.1007/s10577-015-9513-5},
volume = {24},
year = {2016}
}
TY - JOUR
ID - 1333931
AU - Janečka, Jan - Lysák, Martin
PY - 2016
TI - chromDraw: an R package for visualization of linear and circular karyotypes
JF - Chromosome Research
VL - 24
IS - 2
SP - 217-223
EP - 217-223
PB - Springer
SN - 09673849
KW - Visualization
KW - Chromosome
KW - Karyotype
KW - R
UR - http://link.springer.com/article/10.1007/s10577-015-9513-5
L2 - http://link.springer.com/article/10.1007/s10577-015-9513-5
N2 - Species-specific sets of chromosomes-karyotypes-are traditionally depicted as linear ideograms with individual chromosomes represented by vertical bars. However, linear visualization has its limitations when the shared collinearity and/or chromosomal rearrangements differentiating two or more karyotypes need to be demonstrated. In these instances, circular visualization might provide easier comprehension and interpretation of inter-species chromosomal collinearity. The chromDraw graphical tool was developed as a user-friendly graphical tool for visualizing both linear and circular karyotypes based on the same input data matrix. The output graphics, saved in two different formats (EPS and SVG), can be easily imported to and modified in presentation and image-editing computer programs. The tool is freely distributed under GNU General Public License (GPL) and can be installed from Bioconductor or from the chromDraw home page.
ER -
JANEČKA, Jan a Martin LYSÁK. chromDraw: an R package for visualization of linear and circular karyotypes. \textit{Chromosome Research}. Dordrecht: Springer, 2016, roč.~24, č.~2, s.~217-223. ISSN~0967-3849. Dostupné z: https://dx.doi.org/10.1007/s10577-015-9513-5.
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