Reanalysis of Chinese Treponema pallidum samples: all Chinese
samples cluster with SS14-like group of syphilis-causing
treponemes

J 2018

Reanalysis of Chinese Treponema pallidum samples: all Chinese samples cluster with SS14-like group of syphilis-causing treponemes

STROUHAL, Michal; Jan OPPELT; Lenka MIKALOVÁ; Natasha ARORA; Kay NIESELT et. al.

Základní údaje

Originální název

Reanalysis of Chinese Treponema pallidum samples: all Chinese samples cluster with SS14-like group of syphilis-causing treponemes

Autoři

STROUHAL, Michal; Jan OPPELT; Lenka MIKALOVÁ; Natasha ARORA; Kay NIESELT; Fernando GONZÁLEZ-CANDELAS a David ŠMAJS

Vydání

BMC Research Notes, London, BioMed Central Ltd. 2018, 1756-0500

Další údaje

Jazyk

angličtina

Typ výsledku

Článek v odborném periodiku

Obor

10606 Microbiology

Stát vydavatele

Velká Británie a Severní Irsko

Utajení

není předmětem státního či obchodního tajemství

Odkazy

URL

Kód RIV

RIV/00216224:14110/18:00100799

Organizační jednotka

Lékařská fakulta

DOI

https://doi.org/10.1186/s13104-017-3106-7

EID Scopus

2-s2.0-85040445666

Klíčová slova anglicky

Genome sequencing; Phylogenetic analysis; Single nucleotide variant; SyphilisTreponema pallidum

Štítky

EL OK, rivok

Příznaky

Mezinárodní význam, Recenzováno

Změněno: 19. 3. 2025 14:16, Mgr. Tereza Miškechová

Anotace

V originále

Treponema pallidum subsp. pallidum (TPA) is the causative agent of syphilis. Genetic analyses of TPA reference strains and human clinical isolates have revealed two genetically distinct groups of syphilis-causing treponemes, called Nichols-like and SS14-like groups. So far, no genetic intermediates, i.e. strains containing a mixed pattern of Nichols-like and SS14-like genomic sequences, have been identified. Recently, Sun et al. (Oncotarget 2016. https://doi.org/10.18632/oncotarget.10154) described a new “phylogenetic group” (called Lineage 2) among Chinese TPA strains. This lineage exhibited a “mosaic genomic structure” of Nichols-like and SS14-like lineages.

Návaznosti

GA17-25455S, projekt VaV

Název: Studium genomů patogenních treponem na základě analýzy jednotlivých buněk

Investor: Grantová agentura ČR, Studium genomů patogenních treponem na základě analýzy jednotlivých buněk

MUNI/A/1171/2015, interní kód MU

Název: Molekulárně buněčná biologie pro biomedicínu

Investor: Masarykova univerzita, Molekulárně buněčná biologie pro biomedicínu, DO R. 2020_Kategorie A - Specifický výzkum - Studentské výzkumné projekty

Citovat

STROUHAL, Michal; Jan OPPELT; Lenka MIKALOVÁ; Natasha ARORA; Kay NIESELT; Fernando GONZÁLEZ-CANDELAS a David ŠMAJS. Reanalysis of Chinese Treponema pallidum samples: all Chinese samples cluster with SS14-like group of syphilis-causing treponemes. BMC Research Notes. London: BioMed Central Ltd., 2018, roč. 11, č. 1, s. 1-5. ISSN 1756-0500. Dostupné z: https://doi.org/10.1186/s13104-017-3106-7.

@article{1405097,
   author = {Strouhal, Michal and Oppelt, Jan and Mikalová, Lenka and Arora, Natasha and Nieselt, Kay and GonzálezandCandelas, Fernando and Šmajs, David},
   article_location = {London},
   article_number = {1},
   doi = {https://doi.org/10.1186/s13104-017-3106-7},
   keywords = {Genome sequencing; Phylogenetic analysis; Single nucleotide variant; SyphilisTreponema pallidum},
   language = {eng},
   issn = {1756-0500},
   journal = {BMC Research Notes},
   title = {Reanalysis of Chinese Treponema pallidum samples: all Chinese samples cluster with SS14-like group of syphilis-causing treponemes},
   url = {https://bmcresnotes.biomedcentral.com/articles/10.1186/s13104-017-3106-7},
   volume = {11},
   year = {2018}
}

TY  - JOUR
ID  - 1405097
AU  - Strouhal, Michal - Oppelt, Jan - Mikalová, Lenka - Arora, Natasha - Nieselt, Kay - González-Candelas, Fernando - Šmajs, David
PY  - 2018
TI  - Reanalysis of Chinese Treponema pallidum samples: all Chinese samples cluster with SS14-like group of syphilis-causing treponemes
JF  - BMC Research Notes
VL  - 11
IS  - 1
SP  - 1-5
EP  - 1-5
PB  - BioMed Central Ltd.
SN  - 17560500
KW  - Genome sequencing
KW  - Phylogenetic analysis
KW  - Single nucleotide variant
KW  - SyphilisTreponema pallidum
UR  - https://bmcresnotes.biomedcentral.com/articles/10.1186/s13104-017-3106-7
N2  - Treponema pallidum subsp. pallidum (TPA) is the causative agent of syphilis. Genetic analyses of TPA reference strains and human clinical isolates have revealed two genetically distinct groups of syphilis-causing treponemes, called Nichols-like and SS14-like groups. So far, no genetic intermediates, i.e. strains containing a mixed pattern of Nichols-like and SS14-like genomic sequences, have been identified. Recently, Sun et al. (Oncotarget 2016. https://doi.org/10.18632/oncotarget.10154) described a new “phylogenetic group” (called Lineage 2) among Chinese TPA strains. This lineage exhibited a “mosaic genomic structure” of Nichols-like and SS14-like lineages.
ER  -

STROUHAL, Michal; Jan OPPELT; Lenka MIKALOVÁ; Natasha ARORA; Kay NIESELT; Fernando GONZÁLEZ-CANDELAS a David ŠMAJS. Reanalysis of Chinese Treponema pallidum samples: all Chinese samples cluster with SS14-like group of syphilis-causing treponemes. \textit{BMC Research Notes}. London: BioMed Central Ltd., 2018, roč.~11, č.~1, s.~1-5. ISSN~1756-0500. Dostupné z: https://doi.org/10.1186/s13104-017-3106-7.

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