Trebonia kvetii gen. nov., sp. nov., an acidophilic
actinobacterium, and proposal of the new actinobacterial family
Treboniaceae fam. nov.

J 2020

Trebonia kvetii gen. nov., sp. nov., an acidophilic actinobacterium, and proposal of the new actinobacterial family Treboniaceae fam. nov.

RAPOPORT, Daria, Marketa SAGOVA-MARECKOVA, Ivo SEDLÁČEK, Jan PROVAZNIK, Stanislava KRÁLOVÁ et. al.

Základní údaje

Originální název

Trebonia kvetii gen. nov., sp. nov., an acidophilic actinobacterium, and proposal of the new actinobacterial family Treboniaceae fam. nov.

Autoři

RAPOPORT, Daria, Marketa SAGOVA-MARECKOVA, Ivo SEDLÁČEK (203 Česká republika, domácí), Jan PROVAZNIK, Stanislava KRÁLOVÁ (703 Slovensko, domácí), Dinko PAVLINIC, Vladimir BENES a Jan KOPECKY (garant)

Vydání

International Journal of Systematic and Evolutionary Microbiology, London, Microbiology Society, 2020, 1466-5026

Další údaje

Jazyk

angličtina

Typ výsledku

Článek v odborném periodiku

Obor

10606 Microbiology

Stát vydavatele

Velká Británie a Severní Irsko

Utajení

není předmětem státního či obchodního tajemství

Odkazy

URL

Impakt faktor

Impact factor: 2.747

Kód RIV

RIV/00216224:14310/20:00116663

Organizační jednotka

Přírodovědecká fakulta

DOI

http://dx.doi.org/10.1099/ijsem.0.004388

UT WoS

000577279800033

Klíčová slova anglicky

acidic soil; acidophilic and actinobacteria

Štítky

rivok

Příznaky

Mezinárodní význam, Recenzováno

Změněno: 4. 12. 2020 11:34, Mgr. Marie Šípková, DiS.

Anotace

V originále

A novel actinobacterial strain, designated 15TR583T, was isolated from a waterlogged acidic soil collected near the town of Trebon, Czech Republic, and was subjected to a polyphasic taxonomic characterization. Phylogenetic analysis based on 16S rRNA gene and whole-genome sequences revealed that the organism forms an individual line of descent related to the order Streptosporangiales , class Actinomycetia . The strain shared highest 16S rRNA gene sequence similarity, yet of only 92.8%, with Actinocorallia aurea IFO 14752T. The strain grew in white colonies of aerobic, Gram-stain-positive, unbranching substrate mycelium bearing single spores at hyphae tips. The major fatty acids (>10%) were iso-C16 : 0, C16 : 0, iso-C17 : 1 omega 9 and 10-methyl-C17 : 0. The fatty acid pattern differed from all patterns currently described for actinobacterial genera. The organism contained as major menaquinones MK9(H6) and MK9(H8), which differentiated it from other actinobacterial families. Polar lipids were composed of six unidentified glycolipids, an unidentified phosphoglycolipid, two unidentified phospholipids and two unidentified aminolipids. Whole-cell sugars contained galactose, xylose and arabinose as major components. The peptidoglycan type was A1 gamma meso-diaminopimelic acid. The genomic DNA G+C content was 69.7 mol%. The distinct phylogenetic position and unusual combination of chemotaxonomic characteristics justify the proposal of Trebonia gen. nov., with the type species Trebonia kvetii sp. nov. (type strain 15TR583T=CCM 8942T=DSM 109105T), within Treboniaceae fam. nov.

Citovat

RAPOPORT, Daria, Marketa SAGOVA-MARECKOVA, Ivo SEDLÁČEK, Jan PROVAZNIK, Stanislava KRÁLOVÁ, Dinko PAVLINIC, Vladimir BENES a Jan KOPECKY. Trebonia kvetii gen. nov., sp. nov., an acidophilic actinobacterium, and proposal of the new actinobacterial family Treboniaceae fam. nov. International Journal of Systematic and Evolutionary Microbiology. London: Microbiology Society, 2020, roč. 70, č. 9, s. 5106-5114. ISSN 1466-5026. Dostupné z: https://dx.doi.org/10.1099/ijsem.0.004388.

@article{1685239,
   author = {Rapoport, Daria and SagovaandMareckova, Marketa and Sedláček, Ivo and Provaznik, Jan and Králová, Stanislava and Pavlinic, Dinko and Benes, Vladimir and Kopecky, Jan},
   article_location = {London},
   article_number = {9},
   doi = {http://dx.doi.org/10.1099/ijsem.0.004388},
   keywords = {acidic soil; acidophilic and actinobacteria},
   language = {eng},
   issn = {1466-5026},
   journal = {International Journal of Systematic and Evolutionary Microbiology},
   title = {Trebonia kvetii gen. nov., sp. nov., an acidophilic actinobacterium, and proposal of the new actinobacterial family Treboniaceae fam. nov.},
   url = {https://doi.org/10.1099/ijsem.0.004388},
   volume = {70},
   year = {2020}
}

TY  - JOUR
ID  - 1685239
AU  - Rapoport, Daria - Sagova-Mareckova, Marketa - Sedláček, Ivo - Provaznik, Jan - Králová, Stanislava - Pavlinic, Dinko - Benes, Vladimir - Kopecky, Jan
PY  - 2020
TI  - Trebonia kvetii gen. nov., sp. nov., an acidophilic actinobacterium, and proposal of the new actinobacterial family Treboniaceae fam. nov.
JF  - International Journal of Systematic and Evolutionary Microbiology
VL  - 70
IS  - 9
SP  - 5106-5114
EP  - 5106-5114
PB  - Microbiology Society
SN  - 14665026
KW  - acidic soil
KW  - acidophilic and actinobacteria
UR  - https://doi.org/10.1099/ijsem.0.004388
L2  - https://doi.org/10.1099/ijsem.0.004388
N2  - A novel actinobacterial strain, designated 15TR583T, was isolated from a waterlogged acidic soil collected near the town of Trebon, Czech Republic, and was subjected to a polyphasic taxonomic characterization. Phylogenetic analysis based on 16S rRNA gene and whole-genome sequences revealed that the organism forms an individual line of descent related to the order Streptosporangiales , class Actinomycetia . The strain shared highest 16S rRNA gene sequence similarity, yet of only 92.8%, with Actinocorallia aurea IFO 14752T. The strain grew in white colonies of aerobic, Gram-stain-positive, unbranching substrate mycelium bearing single spores at hyphae tips. The major fatty acids (>10%) were iso-C16 : 0, C16 : 0, iso-C17 : 1 omega 9 and 10-methyl-C17 : 0. The fatty acid pattern differed from all patterns currently described for actinobacterial genera. The organism contained as major menaquinones MK9(H6) and MK9(H8), which differentiated it from other actinobacterial families. Polar lipids were composed of six unidentified glycolipids, an unidentified phosphoglycolipid, two unidentified phospholipids and two unidentified aminolipids. Whole-cell sugars contained galactose, xylose and arabinose as major components. The peptidoglycan type was A1 gamma meso-diaminopimelic acid. The genomic DNA G+C content was 69.7 mol%. The distinct phylogenetic position and unusual combination of chemotaxonomic characteristics justify the proposal of Trebonia gen. nov., with the type species Trebonia kvetii sp. nov. (type strain 15TR583T=CCM 8942T=DSM 109105T), within Treboniaceae fam. nov.
ER  -

RAPOPORT, Daria, Marketa SAGOVA-MARECKOVA, Ivo SEDLÁČEK, Jan PROVAZNIK, Stanislava KRÁLOVÁ, Dinko PAVLINIC, Vladimir BENES a Jan KOPECKY. Trebonia kvetii gen. nov., sp. nov., an acidophilic actinobacterium, and proposal of the new actinobacterial family Treboniaceae fam. nov. \textit{International Journal of Systematic and Evolutionary Microbiology}. London: Microbiology Society, 2020, roč.~70, č.~9, s.~5106-5114. ISSN~1466-5026. Dostupné z: https://dx.doi.org/10.1099/ijsem.0.004388.

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