Paenibacillus farraposensis sp. nov., isolated from a root
nodule of Arachis villosa

J 2022

Paenibacillus farraposensis sp. nov., isolated from a root nodule of Arachis villosa

ROLDÁN, Diego M.; Andrés COSTA; Stanislava KRÁLOVÁ; Hans-Jürgen BUSSE; Vanesa AMARELLE et al.

Základní údaje

Originální název

Paenibacillus farraposensis sp. nov., isolated from a root nodule of Arachis villosa

Autoři

ROLDÁN, Diego M.; Andrés COSTA; Stanislava KRÁLOVÁ; Hans-Jürgen BUSSE; Vanesa AMARELLE; Elena FABIANO a Rodolfo Javier MENES

Vydání

International journal of systematic and evolutionary microbiology, Microbiology Society, 2022, 1466-5026

Další údaje

Jazyk

angličtina

Typ výsledku

Článek v odborném periodiku

Obor

10606 Microbiology

Stát vydavatele

Velká Británie a Severní Irsko

Utajení

není předmětem státního či obchodního tajemství

Odkazy

URL

Impakt faktor

Impact factor: 2.800

Označené pro přenos do RIV

Ano

Kód RIV

RIV/00216224:14310/22:00125761

Organizační jednotka

Přírodovědecká fakulta

Klíčová slova anglicky

Paenibacillus; root nodule bacteria; root colonization; Paenibacillus polymyxa complex; biocontrol

Štítky

14314010, rivok

Příznaky

Mezinárodní význam, Recenzováno

Změněno: 4. 5. 2022 10:25, Mgr. Marie Novosadová Šípková, DiS.

Anotace

V originále

Strain UY79T was isolated from a root nodule of Arachis villosa, collected at the Esteros de Farrapos National Park, Río Negro, Uruguay. Cells were non-motile Gram-variable rods with central to subterminal oval to ellipsoidal endospores that swell the sporangia. Growth was observed in the range of 15–42 °C (optimum, 30 °C), pH 5.0–9.0 (optimum, pH 7.0–8.0) and with up to 3 % (w/v) NaCl (optimum, 1–2 %). Strain UY79T was facultative anaerobic, catalase-positive and oxidase-negative. According to the results of 16S rRNA gene sequence analysis, UY79T belongs to the genus Paenibacillus and is closely related to P. ottowii MS2379T, P. peoriae BD-57T, P. polymyxa ATCC 842T and P. brasilensis PB172T, exhibiting 99.4, 99.0, 99.0 and 98.9% sequence identity, respectively. Average nucleotide identity and digital DNA–DNA hybridization values with the most closely related type strains were 74.3–88.6% and 38.2–48.7 %, respectively. Major fatty acids (>10 %) were anteiso-C15:0, iso-C15:0, and C16 : 0. Menaquinones MK-7 and MK-6 were the only isoprenoid quinones detected. Major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine and an unidentified glycolipid. Spermidine was the predominant polyamine. The DNA G+C content based on the draft genome sequence was 46.34 mol%. Based on the current polyphasic study, UY79T represents a novel species of the genus Paenibacillus, for which the name Paenibacillus farraposensis sp. nov. is proposed. The type strain is UY79T (=CCM 9147T=CGMCC 1.19038T).

Citovat

ROLDÁN, Diego M.; Andrés COSTA; Stanislava KRÁLOVÁ; Hans-Jürgen BUSSE; Vanesa AMARELLE; Elena FABIANO a Rodolfo Javier MENES. Paenibacillus farraposensis sp. nov., isolated from a root nodule of Arachis villosa. International journal of systematic and evolutionary microbiology. Microbiology Society, 2022, roč. 72, č. 3, s. 1-9. ISSN 1466-5026. Dostupné z: https://doi.org/10.1099/ijsem.0.005294.

@article{1850964,
   author = {Roldán, Diego M. and Costa, Andrés and Králová, Stanislava and Busse, HansandJürgen and Amarelle, Vanesa and Fabiano, Elena and Menes, Rodolfo Javier},
   article_number = {3},
   doi = {https://doi.org/10.1099/ijsem.0.005294},
   keywords = {Paenibacillus; root nodule bacteria; root colonization; Paenibacillus polymyxa complex; biocontrol},
   language = {eng},
   issn = {1466-5026},
   journal = {International journal of systematic and evolutionary microbiology},
   title = {Paenibacillus farraposensis sp. nov., isolated from a root nodule of Arachis villosa},
   url = {https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.005294},
   volume = {72},
   year = {2022}
}

TY  - JOUR
ID  - 1850964
AU  - Roldán, Diego M. - Costa, Andrés - Králová, Stanislava - Busse, Hans-Jürgen - Amarelle, Vanesa - Fabiano, Elena - Menes, Rodolfo Javier
PY  - 2022
TI  - Paenibacillus farraposensis sp. nov., isolated from a root nodule of Arachis villosa
JF  - International journal of systematic and evolutionary microbiology
VL  - 72
IS  - 3
SP  - 1-9
EP  - 1-9
PB  - Microbiology Society
SN  - 14665026
KW  - Paenibacillus
KW  - root nodule bacteria
KW  - root colonization
KW  - Paenibacillus polymyxa complex
KW  - biocontrol
UR  - https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.005294
N2  - Strain UY79T was isolated from a root nodule of Arachis villosa, collected at the Esteros de Farrapos National Park, Río Negro, Uruguay. Cells were non-motile Gram-variable rods with central to subterminal oval to ellipsoidal endospores that swell the sporangia. Growth was observed in the range of 15–42 °C (optimum, 30 °C), pH 5.0–9.0 (optimum, pH 7.0–8.0) and with up to 3 % (w/v) NaCl (optimum, 1–2 %). Strain UY79T was facultative anaerobic, catalase-positive and oxidase-negative. According to the results of 16S rRNA gene sequence analysis, UY79T belongs to the genus Paenibacillus and is closely related to P. ottowii MS2379T, P. peoriae BD-57T, P. polymyxa ATCC 842T and P. brasilensis PB172T, exhibiting 99.4, 99.0, 99.0 and 98.9% sequence identity, respectively. Average nucleotide identity and digital DNA–DNA hybridization values with the most closely related type strains were 74.3–88.6% and 38.2–48.7 %, respectively. Major fatty acids (>10 %) were anteiso-C15:0, iso-C15:0, and C16 : 0. Menaquinones MK-7 and MK-6 were the only isoprenoid quinones detected. Major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine and an unidentified glycolipid. Spermidine was the predominant polyamine. The DNA G+C content based on the draft genome sequence was 46.34 mol%. Based on the current polyphasic study, UY79T represents a novel species of the genus Paenibacillus, for which the name Paenibacillus farraposensis sp. nov. is proposed. The type strain is UY79T (=CCM 9147T=CGMCC 1.19038T).
ER  -

ROLDÁN, Diego M.; Andrés COSTA; Stanislava KRÁLOVÁ; Hans-Jürgen BUSSE; Vanesa AMARELLE; Elena FABIANO a Rodolfo Javier MENES. Paenibacillus farraposensis sp. nov., isolated from a root nodule of Arachis villosa. \textit{International journal of systematic and evolutionary microbiology}. Microbiology Society, 2022, roč.~72, č.~3, s.~1-9. ISSN~1466-5026. Dostupné z: https://doi.org/10.1099/ijsem.0.005294.

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