Telomerase RNA in Hymenoptera (Insecta) switched to
plant/ciliate-like biogenesis

J 2023

Telomerase RNA in Hymenoptera (Insecta) switched to plant/ciliate-like biogenesis

FAJKUS, Petr, Matej ADÁMIK, Andrew D L NELSON, Agata Magdalena KILAR, Michal FRANEK et. al.

Základní údaje

Originální název

Telomerase RNA in Hymenoptera (Insecta) switched to plant/ciliate-like biogenesis

Autoři

FAJKUS, Petr (203 Česká republika, domácí), Matej ADÁMIK (703 Slovensko), Andrew D L NELSON, Agata Magdalena KILAR (616 Polsko, domácí), Michal FRANEK (703 Slovensko, domácí), Michal BUBENÍK (203 Česká republika, domácí), Radmila Capkova FRYDRYCHOVA, Alena VOTAVOVA, Eva SÝKOROVÁ (203 Česká republika), Jiří FAJKUS (203 Česká republika, garant, domácí) a Vratislav PEŠKA (203 Česká republika)

Vydání

Nucleic acids research, Oxford, Oxford University Press, 2023, 0305-1048

Další údaje

Jazyk

angličtina

Typ výsledku

Článek v odborném periodiku

Obor

10608 Biochemistry and molecular biology

Stát vydavatele

Velká Británie a Severní Irsko

Utajení

není předmětem státního či obchodního tajemství

Odkazy

URL

Impakt faktor

Impact factor: 14.900 v roce 2022

Kód RIV

RIV/00216224:14740/23:00130297

Organizační jednotka

Středoevropský technologický institut

DOI

http://dx.doi.org/10.1093/nar/gkac1202

UT WoS

000902076600001

Klíčová slova anglicky

TEMPLATE-BOUNDARY DEFINITION;PSEUDOKNOT;SEQUENCE;IDENTIFICATION

Štítky

CF GEN, rivok

Příznaky

Mezinárodní význam, Recenzováno

Změněno: 9. 10. 2024 12:16, Mgr. Eva Dubská

Anotace

V originále

In contrast to the catalytic subunit of telomerase, its RNA subunit (TR) is highly divergent in size, sequence and biogenesis pathways across eukaryotes. Current views on TR evolution assume a common origin of TRs transcribed with RNA polymerase II in Opisthokonta (the supergroup including Animalia and Fungi) and Trypanosomida on one hand, and TRs transcribed with RNA polymerase III under the control of type 3 promoter, found in TSAR and Archaeplastida supergroups (including e.g. ciliates and Viridiplantae taxa, respectively). Here, we focus on unknown TRs in one of the largest Animalia order - Hymenoptera (Arthropoda) with more than 300 available representative genomes. Using a combination of bioinformatic and experimental approaches, we identify their TRs. In contrast to the presumed type of TRs (H/ACA box snoRNAs transcribed with RNA Polymerase II) corresponding to their phylogenetic position, we find here short TRs of the snRNA type, likely transcribed with RNA polymerase III under the control of the type 3 promoter. The newly described insect TRs thus question the hitherto assumed monophyletic origin of TRs across Animalia and point to an evolutionary switch in TR type and biogenesis that was associated with the divergence of Arthropods.

Návaznosti

GX20-01331X, projekt VaV

Název: Biogeneze a evoluce telomerázy u rostlin

Investor: Grantová agentura ČR, Biogenesis and evolution of telomerase in plants

LM2018131, projekt VaV

Název: Česká národní infrastruktura pro biologická data (Akronym: ELIXIR-CZ)

Investor: Ministerstvo školství, mládeže a tělovýchovy ČR, Česká národní infrastruktura pro biologická data

LM2018132, projekt VaV

Název: Národní centrum lékařské genomiky (Akronym: NCLG)

Investor: Ministerstvo školství, mládeže a tělovýchovy ČR, Národní centrum lékařské genomiky

LM2018140, projekt VaV

Název: e-Infrastruktura CZ (Akronym: e-INFRA CZ)

Investor: Ministerstvo školství, mládeže a tělovýchovy ČR, e-Infrastruktura CZ

Citovat

FAJKUS, Petr, Matej ADÁMIK, Andrew D L NELSON, Agata Magdalena KILAR, Michal FRANEK, Michal BUBENÍK, Radmila Capkova FRYDRYCHOVA, Alena VOTAVOVA, Eva SÝKOROVÁ, Jiří FAJKUS a Vratislav PEŠKA. Telomerase RNA in Hymenoptera (Insecta) switched to plant/ciliate-like biogenesis. Nucleic acids research. Oxford: Oxford University Press, 2023, roč. 51, č. 1, s. 420-433. ISSN 0305-1048. Dostupné z: https://dx.doi.org/10.1093/nar/gkac1202.

@article{2253648,
   author = {Fajkus, Petr and Adámik, Matej and Nelson, Andrew D L and Kilar, Agata Magdalena and Franek, Michal and Bubeník, Michal and Frydrychova, Radmila Capkova and Votavova, Alena and Sýkorová, Eva and Fajkus, Jiří and Peška, Vratislav},
   article_location = {Oxford},
   article_number = {1},
   doi = {http://dx.doi.org/10.1093/nar/gkac1202},
   keywords = {TEMPLATE-BOUNDARY DEFINITION;PSEUDOKNOT;SEQUENCE;IDENTIFICATION},
   language = {eng},
   issn = {0305-1048},
   journal = {Nucleic acids research},
   title = {Telomerase RNA in Hymenoptera (Insecta) switched to plant/ciliate-like biogenesis},
   url = {https://academic.oup.com/nar/article/51/1/420/6956357},
   volume = {51},
   year = {2023}
}

TY  - JOUR
ID  - 2253648
AU  - Fajkus, Petr - Adámik, Matej - Nelson, Andrew D L - Kilar, Agata Magdalena - Franek, Michal - Bubeník, Michal - Frydrychova, Radmila Capkova - Votavova, Alena - Sýkorová, Eva - Fajkus, Jiří - Peška, Vratislav
PY  - 2023
TI  - Telomerase RNA in Hymenoptera (Insecta) switched to plant/ciliate-like biogenesis
JF  - Nucleic acids research
VL  - 51
IS  - 1
SP  - 420-433
EP  - 420-433
PB  - Oxford University Press
SN  - 03051048
KW  - TEMPLATE-BOUNDARY DEFINITION;PSEUDOKNOT;SEQUENCE;IDENTIFICATION
UR  - https://academic.oup.com/nar/article/51/1/420/6956357
N2  - In contrast to the catalytic subunit of telomerase, its RNA subunit (TR) is highly divergent in size, sequence and biogenesis pathways across eukaryotes. Current views on TR evolution assume a common origin of TRs transcribed with RNA polymerase II in Opisthokonta (the supergroup including Animalia and Fungi) and Trypanosomida on one hand, and TRs transcribed with RNA polymerase III under the control of type 3 promoter, found in TSAR and Archaeplastida supergroups (including e.g. ciliates and Viridiplantae taxa, respectively). Here, we focus on unknown TRs in one of the largest Animalia order - Hymenoptera (Arthropoda) with more than 300 available representative genomes. Using a combination of bioinformatic and experimental approaches, we identify their TRs. In contrast to the presumed type of TRs (H/ACA box snoRNAs transcribed with RNA Polymerase II) corresponding to their phylogenetic position, we find here short TRs of the snRNA type, likely transcribed with RNA polymerase III under the control of the type 3 promoter. The newly described insect TRs thus question the hitherto assumed monophyletic origin of TRs across Animalia and point to an evolutionary switch in TR type and biogenesis that was associated with the divergence of Arthropods.
ER  -

FAJKUS, Petr, Matej ADÁMIK, Andrew D L NELSON, Agata Magdalena KILAR, Michal FRANEK, Michal BUBENÍK, Radmila Capkova FRYDRYCHOVA, Alena VOTAVOVA, Eva SÝKOROVÁ, Jiří FAJKUS a Vratislav PEŠKA. Telomerase RNA in Hymenoptera (Insecta) switched to plant/ciliate-like biogenesis. \textit{Nucleic acids research}. Oxford: Oxford University Press, 2023, roč.~51, č.~1, s.~420-433. ISSN~0305-1048. Dostupné z: https://dx.doi.org/10.1093/nar/gkac1202.

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