The biological functions of nonsense-mediated mRNA decay in
plants: RNA quality control and beyond

J 2023

The biological functions of nonsense-mediated mRNA decay in plants: RNA quality control and beyond

RAXWAL, Vivek Kumar and Karel ŘÍHA

Basic information

Original name

The biological functions of nonsense-mediated mRNA decay in plants: RNA quality control and beyond

Authors

RAXWAL, Vivek Kumar (356 India, belonging to the institution) and Karel ŘÍHA (203 Czech Republic, guarantor, belonging to the institution)

Edition

Biochemical Society Transactions, London, Portland Press, 2023, 0300-5127

Other information

Language

English

Type of outcome

Článek v odborném periodiku

Field of Study

10608 Biochemistry and molecular biology

Country of publisher

United Kingdom of Great Britain and Northern Ireland

Confidentiality degree

není předmětem státního či obchodního tajemství

References:

URL

Impact factor

Impact factor: 3.900 in 2022

RIV identification code

RIV/00216224:14740/23:00133563

Organization unit

Central European Institute of Technology

DOI

http://dx.doi.org/10.1042/BST20211231

UT WoS

000926043000001

Keywords in English

alternative splicing; Arabidopsis thaliana; nonsense-mediated decay; post-transcriptional gene regulation

Abstract

V originále

Nonsense-mediated mRNA decay (NMD) is an evolutionarily conserved quality control pathway that inhibits the expression of transcripts containing premature termination codon. Transcriptome and phenotypic studies across a range of organisms indicate roles of NMD beyond RNA quality control and imply its involvement in regulating gene expression in a wide range of physiological processes. Studies in moss Physcomitrella patens and Arabidopsis thaliana have shown that NMD is also important in plants where it contributes to the regulation of pathogen defence, hormonal signalling, circadian clock, reproduction and gene evolution. Here, we provide up to date overview of the biological functions of NMD in plants. In addition, we discuss several biological processes where NMD factors implement their function through NMD-independent mechanisms.

Links

EF15_003/0000479, research and development project

Name: Regulace rostlinné meiózy

Citovat

RAXWAL, Vivek Kumar and Karel ŘÍHA. The biological functions of nonsense-mediated mRNA decay in plants: RNA quality control and beyond. Biochemical Society Transactions. London: Portland Press, 2023, vol. 51, No 1, p. 31-39. ISSN 0300-5127. Available from: https://dx.doi.org/10.1042/BST20211231.

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   author = {Raxwal, Vivek Kumar and Říha, Karel},
   article_location = {London},
   article_number = {1},
   doi = {http://dx.doi.org/10.1042/BST20211231},
   keywords = {alternative splicing; Arabidopsis thaliana; nonsense-mediated decay; post-transcriptional gene regulation},
   language = {eng},
   issn = {0300-5127},
   journal = {Biochemical Society Transactions},
   title = {The biological functions of nonsense-mediated mRNA decay in plants: RNA quality control and beyond},
   url = {https://portlandpress.com/biochemsoctrans/article-abstract/51/1/31/232498/The-biological-functions-of-nonsense-mediated-mRNA?redirectedFrom=fulltext},
   volume = {51},
   year = {2023}
}

TY  - JOUR
ID  - 2375298
AU  - Raxwal, Vivek Kumar - Říha, Karel
PY  - 2023
TI  - The biological functions of nonsense-mediated mRNA decay in plants: RNA quality control and beyond
JF  - Biochemical Society Transactions
VL  - 51
IS  - 1
SP  - 31-39
EP  - 31-39
PB  - Portland Press
SN  - 03005127
KW  - alternative splicing
KW  - Arabidopsis thaliana
KW  - nonsense-mediated decay
KW  - post-transcriptional gene regulation
UR  - https://portlandpress.com/biochemsoctrans/article-abstract/51/1/31/232498/The-biological-functions-of-nonsense-mediated-mRNA?redirectedFrom=fulltext
N2  - Nonsense-mediated mRNA decay (NMD) is an evolutionarily conserved quality control pathway that inhibits the expression of transcripts containing premature termination codon. Transcriptome and phenotypic studies across a range of organisms indicate roles of NMD beyond RNA quality control and imply its involvement in regulating gene expression in a wide range of physiological processes. Studies in moss Physcomitrella patens and Arabidopsis thaliana have shown that NMD is also important in plants where it contributes to the regulation of pathogen defence, hormonal signalling, circadian clock, reproduction and gene evolution. Here, we provide up to date overview of the biological functions of NMD in plants. In addition, we discuss several biological processes where NMD factors implement their function through NMD-independent mechanisms.
ER  -

RAXWAL, Vivek Kumar and Karel ŘÍHA. The biological functions of nonsense-mediated mRNA decay in plants: RNA quality control and beyond. \textit{Biochemical Society Transactions}. London: Portland Press, 2023, vol.~51, No~1, p.~31-39. ISSN~0300-5127. Available from: https://dx.doi.org/10.1042/BST20211231.

Detailed Information on Publication Record