Edaphobase 2.0: Advanced international data warehouse for
collating and using soil biodiversity datasets

J 2024

Edaphobase 2.0: Advanced international data warehouse for collating and using soil biodiversity datasets

RUSSELL, D J; E. NAUDTS; N A SOUDZILOVSKAIA; M J I BRIONES; M. CAKIR et al.

Základní údaje

Originální název

Edaphobase 2.0: Advanced international data warehouse for collating and using soil biodiversity datasets

Autoři

Vydání

Applied Soil Ecology, AMSTERDAM, NETHERLANDS, ELSEVIER SCIENCE BV, 2024, 0929-1393

Další údaje

Jazyk

angličtina

Typ výsledku

Článek v odborném periodiku

Obor

40104 Soil science

Stát vydavatele

Nizozemské království

Utajení

není předmětem státního či obchodního tajemství

Odkazy

URL

Impakt faktor

Impact factor: 5.000

Označené pro přenos do RIV

Ano

Kód RIV

RIV/00216224:14310/24:00138707

Organizační jednotka

Přírodovědecká fakulta

Klíčová slova anglicky

Soil biodiversity; Data warehouse; Edaphobase; Environmental metadata; Data sharing

Štítky

14314020

Příznaky

Mezinárodní význam, Recenzováno

Změněno: 22. 3. 2025 18:53, Mgr. Lucie Jarošová, DiS.

Anotace

V originále

Soil and soil-biodiversity protection are increasingly important issues in environmental science and policies, requiring the availability of high-quality empirical data on soil biodiversity. Here we present a publicly available data warehouse for the soil-biodiversity domain, Edaphobase 2.0, which provides a comprehensive toolset for storing and re-using international soil-biodiversity data sets, following the FAIR (Findable, Accessible, Interoperable, and Reusable) principles. A major strength is the possibility of annotating biodiversity data with exhaustive geographical, environmental and methodological metadata, allowing a wide range of applications and analyses. The system harmonises and integrates heterogeneous data from diverse sources into standardised formats, which can be searched together using numerous filter possibilities, and offers data exploration and analysis tools. Edaphobase features a strict data transparency policy, comprehensive quality control, and DOIs can be provided for individual data sets. The database currently contains >450,000 data records from >35,0000 sites and is accessed nearly 14,000 times/year. The data curated by Edaphobase 2.0 can greatly aid researchers, conservationists and decision makers in understanding and protecting soil biodiversity.

Citovat

RUSSELL, D J; E. NAUDTS; N A SOUDZILOVSKAIA; M J I BRIONES; M. CAKIR; E. CONTI; J. CORTET; C. FIERA; D Hackenberger KUTUZOVIC HACKENBERGER; M. HEDDE; K. HOHBERG; D. INDJIC; P H KROGH; R. LEHMITZ; S. LESCH; Z. MARJANOVIC; C. MULDER; L. MUMLADZE; M. MURVANIDZE; S. RICK; M. ROSS-NICKOLL; Jiří SCHLAGHAMERSKÝ; O. SCHMIDT; O. SHELEF; M. SUHADOLC; M. TSIAFOULI; A. WINDING; A. ZAYTSEV a A. POTAPOV. Edaphobase 2.0: Advanced international data warehouse for collating and using soil biodiversity datasets. Applied Soil Ecology. AMSTERDAM, NETHERLANDS: ELSEVIER SCIENCE BV, 2024, roč. 204, December, s. 105710-105724. ISSN 0929-1393. Dostupné z: https://doi.org/10.1016/j.apsoil.2024.105710.

@article{2472650,
   author = {Russell, D J and Naudts, E. and Soudzilovskaia, N A and Briones, M J I and Cakir, M. and Conti, E. and Cortet, J. and Fiera, C. and Kutuzovic Hackenberger, D Hackenberger and Hedde, M. and Hohberg, K. and Indjic, D. and Krogh, P H and Lehmitz, R. and Lesch, S. and Marjanovic, Z. and Mulder, C. and Mumladze, L. and Murvanidze, M. and Rick, S. and RossandNickoll, M. and Schlaghamerský, Jiří and Schmidt, O. and Shelef, O. and Suhadolc, M. and Tsiafouli, M. and Winding, A. and Zaytsev, A. and Potapov, A.},
   article_location = {AMSTERDAM, NETHERLANDS},
   article_number = {December},
   doi = {https://doi.org/10.1016/j.apsoil.2024.105710},
   keywords = {Soil biodiversity; Data warehouse; Edaphobase; Environmental metadata; Data sharing},
   language = {eng},
   issn = {0929-1393},
   journal = {Applied Soil Ecology},
   title = {Edaphobase 2.0: Advanced international data warehouse for collating and using soil biodiversity datasets},
   url = {https://doi.org/10.1016/j.apsoil.2024.105710},
   volume = {204},
   year = {2024}
}

TY  - JOUR
ID  - 2472650
AU  - Russell, D J - Naudts, E. - Soudzilovskaia, N A - Briones, M J I - Cakir, M. - Conti, E. - Cortet, J. - Fiera, C. - Kutuzovic Hackenberger, D Hackenberger - Hedde, M. - Hohberg, K. - Indjic, D. - Krogh, P H - Lehmitz, R. - Lesch, S. - Marjanovic, Z. - Mulder, C. - Mumladze, L. - Murvanidze, M. - Rick, S. - Ross-Nickoll, M. - Schlaghamerský, Jiří - Schmidt, O. - Shelef, O. - Suhadolc, M. - Tsiafouli, M. - Winding, A. - Zaytsev, A. - Potapov, A.
PY  - 2024
TI  - Edaphobase 2.0: Advanced international data warehouse for collating and using soil biodiversity datasets
JF  - Applied Soil Ecology
VL  - 204
IS  - December
SP  - 105710
EP  - 105710
PB  - ELSEVIER SCIENCE BV
SN  - 09291393
KW  - Soil biodiversity
KW  - Data warehouse
KW  - Edaphobase
KW  - Environmental metadata
KW  - Data sharing
UR  - https://doi.org/10.1016/j.apsoil.2024.105710
N2  - Soil and soil-biodiversity protection are increasingly important issues in environmental science and policies, requiring the availability of high-quality empirical data on soil biodiversity. Here we present a publicly available data warehouse for the soil-biodiversity domain, Edaphobase 2.0, which provides a comprehensive toolset for storing and re-using international soil-biodiversity data sets, following the FAIR (Findable, Accessible, Interoperable, and Reusable) principles. A major strength is the possibility of annotating biodiversity data with exhaustive geographical, environmental and methodological metadata, allowing a wide range of applications and analyses. The system harmonises and integrates heterogeneous data from diverse sources into standardised formats, which can be searched together using numerous filter possibilities, and offers data exploration and analysis tools. Edaphobase features a strict data transparency policy, comprehensive quality control, and DOIs can be provided for individual data sets. The database currently contains >450,000 data records from >35,0000 sites and is accessed nearly 14,000 times/year. The data curated by Edaphobase 2.0 can greatly aid researchers, conservationists and decision makers in understanding and protecting soil biodiversity.
ER  -

RUSSELL, D J; E. NAUDTS; N A SOUDZILOVSKAIA; M J I BRIONES; M. CAKIR; E. CONTI; J. CORTET; C. FIERA; D Hackenberger KUTUZOVIC HACKENBERGER; M. HEDDE; K. HOHBERG; D. INDJIC; P H KROGH; R. LEHMITZ; S. LESCH; Z. MARJANOVIC; C. MULDER; L. MUMLADZE; M. MURVANIDZE; S. RICK; M. ROSS-NICKOLL; Jiří SCHLAGHAMERSKÝ; O. SCHMIDT; O. SHELEF; M. SUHADOLC; M. TSIAFOULI; A. WINDING; A. ZAYTSEV a A. POTAPOV. Edaphobase 2.0: Advanced international data warehouse for collating and using soil biodiversity datasets. \textit{Applied Soil Ecology}. AMSTERDAM, NETHERLANDS: ELSEVIER SCIENCE BV, 2024, roč.~204, December, s.~105710-105724. ISSN~0929-1393. Dostupné z: https://doi.org/10.1016/j.apsoil.2024.105710.

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