The primate gut mycobiome-bacteriome interface is impacted by
environmental and subsistence factors

J 2022

The primate gut mycobiome-bacteriome interface is impacted by environmental and subsistence factors

SHARMA, Ashok K.; Sam DAVISON; Barbora PAFČO; Jonathan B. CLAYTON; Jessica M. ROTHMAN et al.

Základní údaje

Originální název

The primate gut mycobiome-bacteriome interface is impacted by environmental and subsistence factors

Autoři

Vydání

NPJ BIOFILMS AND MICROBIOMES, BERLIN, NATURE PORTFOLIO, 2022

Další údaje

Jazyk

angličtina

Typ výsledku

Článek v odborném periodiku

Obor

10606 Microbiology

Stát vydavatele

Německo

Utajení

není předmětem státního či obchodního tajemství

Odkazy

URL

Označené pro přenos do RIV

Organizační jednotka

Přírodovědecká fakulta

Klíčová slova anglicky

Animals; Bacteria; Gastrointestinal Microbiome; Mycobiome; Phylogeny; Primates

Štítky

RIV ne

Příznaky

Mezinárodní význam, Recenzováno

Změněno: 5. 3. 2026 14:02, Mgr. Lucie Jarošová, DiS.

Anotace

V originále

The gut microbiome of primates is known to be influenced by both host genetic background and subsistence strategy. However, these inferences have been made mainly based on adaptations in bacterial composition - the bacteriome and have commonly overlooked the fungal fraction - the mycobiome. To further understand the factors that shape the gut mycobiome of primates and mycobiome-bacteriome interactions, we sequenced 16 S rRNA and ITS2 markers in fecal samples of four different nonhuman primate species and three human groups under different subsistence patterns (n = 149). The results show that gut mycobiome composition in primates is still largely unknown but highly plastic and weakly structured by primate phylogeny, compared with the bacteriome. We find significant gut mycobiome overlap between captive apes and human populations living under industrialized subsistence contexts; this is in contrast with contemporary hunter-gatherers and agriculturalists, who share more mycobiome traits with diverse wild-ranging nonhuman primates. In addition, mycobiome-bacteriome interactions were specific to each population, revealing that individual, lifestyle and intrinsic ecological factors affect structural correspondence, number, and kind of interactions between gut bacteria and fungi in primates. Our findings indicate a dominant effect of ecological niche, environmental factors, and diet over the phylogenetic background of the host, in shaping gut mycobiome composition and mycobiome-bacteriome interactions in primates.

Citovat

SHARMA, Ashok K.; Sam DAVISON; Barbora PAFČO; Jonathan B. CLAYTON; Jessica M. ROTHMAN; Matthew R. MCLENNAN; Marie CIBOT; Terence FUH; Roman VODICKA; Carolyn Jost ROBINSON; Klara PETRZELKOVA a Andres GOMEZ. The primate gut mycobiome-bacteriome interface is impacted by environmental and subsistence factors. Online. NPJ BIOFILMS AND MICROBIOMES. BERLIN: NATURE PORTFOLIO, 2022, roč. 8, č. 1, s. 1-11. Dostupné z: https://doi.org/10.1038/s41522-022-00274-3.

@article{2558543,
   author = {Sharma, Ashok K. and Davison, Sam and Pafčo, Barbora and Clayton, Jonathan B. and Rothman, Jessica M. and McLennan, Matthew R. and Cibot, Marie and Fuh, Terence and Vodicka, Roman and Robinson, Carolyn Jost and Petrzelkova, Klara and Gomez, Andres},
   article_location = {BERLIN},
   article_number = {1},
   doi = {https://doi.org/10.1038/s41522-022-00274-3},
   keywords = {Animals; Bacteria; Gastrointestinal Microbiome; Mycobiome; Phylogeny; Primates},
   language = {eng},
   journal = {NPJ BIOFILMS AND MICROBIOMES},
   title = {The primate gut mycobiome-bacteriome interface is impacted by environmental and subsistence factors},
   url = {https://doi.org/10.1038/s41522-022-00274-3},
   volume = {8},
   year = {2022}
}

TY  - JOUR
ID  - 2558543
AU  - Sharma, Ashok K. - Davison, Sam - Pafčo, Barbora - Clayton, Jonathan B. - Rothman, Jessica M. - McLennan, Matthew R. - Cibot, Marie - Fuh, Terence - Vodicka, Roman - Robinson, Carolyn Jost - Petrzelkova, Klara - Gomez, Andres
PY  - 2022
TI  - The primate gut mycobiome-bacteriome interface is impacted by environmental and subsistence factors
JF  - NPJ BIOFILMS AND MICROBIOMES
VL  - 8
IS  - 1
SP  - 1-11
EP  - 1-11
PB  - NATURE PORTFOLIO
KW  - Animals
KW  - Bacteria
KW  - Gastrointestinal Microbiome
KW  - Mycobiome
KW  - Phylogeny
KW  - Primates
UR  - https://doi.org/10.1038/s41522-022-00274-3
N2  - The gut microbiome of primates is known to be influenced by both host genetic background and subsistence strategy. However, these inferences have been made mainly based on adaptations in bacterial composition - the bacteriome and have commonly overlooked the fungal fraction - the mycobiome. To further understand the factors that shape the gut mycobiome of primates and mycobiome-bacteriome interactions, we sequenced 16 S rRNA and ITS2 markers in fecal samples of four different nonhuman primate species and three human groups under different subsistence patterns (n = 149). The results show that gut mycobiome composition in primates is still largely unknown but highly plastic and weakly structured by primate phylogeny, compared with the bacteriome. We find significant gut mycobiome overlap between captive apes and human populations living under industrialized subsistence contexts; this is in contrast with contemporary hunter-gatherers and agriculturalists, who share more mycobiome traits with diverse wild-ranging nonhuman primates. In addition, mycobiome-bacteriome interactions were specific to each population, revealing that individual, lifestyle and intrinsic ecological factors affect structural correspondence, number, and kind of interactions between gut bacteria and fungi in primates. Our findings indicate a dominant effect of ecological niche, environmental factors, and diet over the phylogenetic background of the host, in shaping gut mycobiome composition and mycobiome-bacteriome interactions in primates.
ER  -

SHARMA, Ashok K.; Sam DAVISON; Barbora PAFČO; Jonathan B. CLAYTON; Jessica M. ROTHMAN; Matthew R. MCLENNAN; Marie CIBOT; Terence FUH; Roman VODICKA; Carolyn Jost ROBINSON; Klara PETRZELKOVA a Andres GOMEZ. The primate gut mycobiome-bacteriome interface is impacted by environmental and subsistence factors. Online. \textit{NPJ BIOFILMS AND MICROBIOMES}. BERLIN: NATURE PORTFOLIO, 2022, roč.~8, č.~1, s.~1-11. Dostupné z: https://doi.org/10.1038/s41522-022-00274-3.

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