Genomic relatedness of Staphylococcus aureus phages of the
International Typing Set and detection of serogroup A, B, and F
prophages in lysogenic strains

J 2000

Genomic relatedness of Staphylococcus aureus phages of the International Typing Set and detection of serogroup A, B, and F prophages in lysogenic strains

DOŠKAŘ, Jiří, Petra PALLOVÁ, Roman PANTŮČEK, Stanislav ROSYPAL, Vladislava RŮŽIČKOVÁ et. al.

Základní údaje

Originální název

Genomic relatedness of Staphylococcus aureus phages of the International Typing Set and detection of serogroup A, B, and F prophages in lysogenic strains

Autoři

DOŠKAŘ, Jiří (203 Česká republika, garant), Petra PALLOVÁ (203 Česká republika), Roman PANTŮČEK (203 Česká republika), Stanislav ROSYPAL (203 Česká republika), Vladislava RŮŽIČKOVÁ (203 Česká republika), Pavla PANTŮČKOVÁ, Jana KAILEROVÁ (203 Česká republika), Karel KLEPÁRNÍK, Zdena MALÁ a Petr BOČEK

Vydání

Canadian Journal of Microbiology, Ottawa, Canada, N R C Research Press, 2000, 0008-4166

Další údaje

Jazyk

angličtina

Typ výsledku

Článek v odborném periodiku

Obor

Genetika a molekulární biologie

Stát vydavatele

Kanada

Utajení

není předmětem státního či obchodního tajemství

Odkazy

[Abstract] [Full Text]

Impakt faktor

Impact factor: 1.105

Kód RIV

RIV/00216224:14310/00:00002526

Organizační jednotka

Přírodovědecká fakulta

Klíčová slova anglicky

Staphylococcus aureus; bacteriophages; prophage specific probes; restriction endonuclease maps

Štítky

bacteriophages, prophage specific probes, restriction endonuclease maps, Staphylococcus aureus

Příznaky

Mezinárodní význam, Recenzováno

Změněno: 15. 2. 2008 10:15, prof. RNDr. Roman Pantůček, Ph.D.

Anotace

V originále

On the basis of HindIII-restriction digest analysis of genomic DNAs, the S. aureus bacteriophages of the International Typing Set were divided into five clusters designated as A, F, Ba, Bb, and Bc. The clusters A and F include all the phages of serogroups A and F and correspond to species 3A and 77 proposed by Ackermann and DuBow (1987). On the other hand, the phages of serogroup B were divided into three clusters designated as Ba, Bb, and Bc that differ significantly each from the other in their restriction patterns. The clusters Ba and Bb may represent two separate species, while the cluster Bc may include more than one phage species. For each of the phage serogroups A, B, and F, common HindIII-restriction fragments of phage 3A (1700 bp), of 53 (4060 bp), and of 77 (8300 bp) were used for the preparation of probes specific to the phages of serogroups A, B, and F. These probes were very effective, making it possible to detect up to three different prophages in a given lysogenic strain at the same time. Restriction enzyme maps of phages 3A, 53, and 77, each representing a different serogroup, were constructed. The restriction maps of phage 3A and that of phage 77 are linear, whereas that of phage 53 is circular and exhibits a circular permutation. DNAs of the phages of serogroups A and F have cohesive ends. On each restriction map, the sites corresponding to specific probes are indicated. The size of intact genomic DNA of all phages estimated by PFGE varies within the range of 41.5-46.2 kb.

Návaznosti

GA301/97/1192, projekt VaV

Název: Molekulární identifikace a diagnostika stafylokoků způsobující nozokomiální infekce

Investor: Grantová agentura ČR, Molekulární identifikace a diagnostika stafylokoků způsobující nozokomiální infekce

MSM 143100008, záměr

Název: Genomy a jejich funkce

Investor: Ministerstvo školství, mládeže a tělovýchovy ČR, Genomy a jejich funkce

Citovat

DOŠKAŘ, Jiří, Petra PALLOVÁ, Roman PANTŮČEK, Stanislav ROSYPAL, Vladislava RŮŽIČKOVÁ, Pavla PANTŮČKOVÁ, Jana KAILEROVÁ, Karel KLEPÁRNÍK, Zdena MALÁ a Petr BOČEK. Genomic relatedness of Staphylococcus aureus phages of the International Typing Set and detection of serogroup A, B, and F prophages in lysogenic strains. Canadian Journal of Microbiology. Ottawa, Canada: N R C Research Press, 2000, roč. 46, č. 11, s. 1066-1076. ISSN 0008-4166.

@article{344393,
   author = {Doškař, Jiří and Pallová, Petra and Pantůček, Roman and Rosypal, Stanislav and Růžičková, Vladislava and Pantůčková, Pavla and Kailerová, Jana and Klepárník, Karel and Malá, Zdena and Boček, Petr},
   article_location = {Ottawa, Canada},
   article_number = {11},
   keywords = {Staphylococcus aureus; bacteriophages; prophage specific probes; restriction endonuclease maps},
   language = {eng},
   issn = {0008-4166},
   journal = {Canadian Journal of Microbiology},
   title = {Genomic relatedness of Staphylococcus aureus phages of the International Typing Set and detection of serogroup A, B, and F prophages in lysogenic strains},
   url = {http://www.nrc.ca/cgi-bin/cisti/journals/rp/rp2_abst_e?cjm_w00-097_46_ns_nf_cjm11-00},
   volume = {46},
   year = {2000}
}

TY  - JOUR
ID  - 344393
AU  - Doškař, Jiří - Pallová, Petra - Pantůček, Roman - Rosypal, Stanislav - Růžičková, Vladislava - Pantůčková, Pavla - Kailerová, Jana - Klepárník, Karel - Malá, Zdena - Boček, Petr
PY  - 2000
TI  - Genomic relatedness of Staphylococcus aureus phages of the International Typing Set and detection of serogroup A, B, and F prophages in lysogenic strains
JF  - Canadian Journal of Microbiology
VL  - 46
IS  - 11
SP  - 1066
EP  - 1066
PB  - N R C Research Press
SN  - 00084166
KW  - Staphylococcus aureus
KW  - bacteriophages
KW  - prophage specific probes
KW  - restriction endonuclease maps
UR  - http://www.nrc.ca/cgi-bin/cisti/journals/rp/rp2_abst_e?cjm_w00-097_46_ns_nf_cjm11-00
N2  - On the basis of HindIII-restriction digest analysis of genomic DNAs, the S. aureus bacteriophages of the International Typing Set were divided into five clusters designated as A, F, Ba, Bb, and Bc. The clusters A and F include all the phages of serogroups A and F and correspond to species 3A and 77 proposed by Ackermann and DuBow (1987). On the other hand, the phages of serogroup B were divided into three clusters designated as Ba, Bb, and Bc that differ significantly each from the other in their restriction patterns. The clusters Ba and Bb may represent two separate species, while the cluster Bc may include more than one phage species. For each of the phage serogroups A, B, and F, common HindIII-restriction fragments of phage 3A (1700 bp), of 53 (4060 bp), and of 77 (8300 bp) were used for the preparation of probes specific to the phages of serogroups A, B, and F. These probes were very effective, making it possible to detect up to three different prophages in a given lysogenic strain at the same time. Restriction enzyme maps of phages 3A, 53, and 77, each representing a different serogroup, were constructed. The restriction maps of phage 3A and that of phage 77 are linear, whereas that of phage 53 is circular and exhibits a circular permutation. DNAs of the phages of serogroups A and F have cohesive ends. On each restriction map, the sites corresponding to specific probes are indicated. The size of intact genomic DNA of all phages estimated by PFGE varies within the range of 41.5-46.2 kb.
ER  -

DOŠKAŘ, Jiří, Petra PALLOVÁ, Roman PANTŮČEK, Stanislav ROSYPAL, Vladislava RŮŽIČKOVÁ, Pavla PANTŮČKOVÁ, Jana KAILEROVÁ, Karel KLEPÁRNÍK, Zdena MALÁ a Petr BOČEK. Genomic relatedness of $<$I$>$Staphylococcus aureus$<$/I$>$ phages of the International Typing Set and detection of serogroup A, B, and F prophages in lysogenic strains. \textit{Canadian Journal of Microbiology}. Ottawa, Canada: N R C Research Press, 2000, roč.~46, č.~11, s.~1066-1076. ISSN~0008-4166.

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